RNA–Protein interactions for RNA: ENST00000296273.6

RFC4-201, Transcript of replication factor C subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFC4, Length 1,384 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-201ENST00000296273 HABP4Q5JVS0 413 aaKnown RBP13.32□□□□□ -0.28
RFC4-201ENST00000296273 NBPF11Q86T75 865 aa13.32□□□□□ -0.28
RFC4-201ENST00000296273 WDR63Q8IWG1 891 aa13.32□□□□□ -0.28
RFC4-201ENST00000296273 TMEM106CQ9BVX2 250 aa13.32□□□□□ -0.28
RFC4-201ENST00000296273 ELP3Q9H9T3 547 aa13.32□□□□□ -0.28
RFC4-201ENST00000296273 ZFYVE28Q9HCC9 887 aa13.32□□□□□ -0.28
RFC4-201ENST00000296273 ZNF70Q9UC06 446 aaPredicted RBP13.32□□□□□ -0.28
RFC4-201ENST00000296273 TTF2Q9UNY4 1162 aaKnown RBP13.32□□□□□ -0.28
RFC4-201ENST00000296273 JAG2Q9Y219 1238 aa13.32□□□□□ -0.28
RFC4-201ENST00000296273 WDHD1O75717 1129 aaPredicted RBP13.32□□□□□ -0.28
RFC4-201ENST00000296273 HIBADHP31937 336 aaKnown RBP13.32□□□□□ -0.28
RFC4-201ENST00000296273 GTF2A2P52657 109 aa13.32□□□□□ -0.28
RFC4-201ENST00000296273 DZIP1LQ8IYY4 767 aaKnown RBP13.32□□□□□ -0.28
RFC4-201ENST00000296273 MS4A4AQ96JQ5 239 aa13.32□□□□□ -0.28
RFC4-201ENST00000296273 C9orf78Q9NZ63 289 aaPredicted RBP13.32□□□□□ -0.28
RFC4-201ENST00000296273 AOX1Q06278 1338 aa13.31□□□□□ -0.28
RFC4-201ENST00000296273 F6X3S4 739 aa13.31□□□□□ -0.28
RFC4-201ENST00000296273 MAP3K9P80192 1104 aa13.31□□□□□ -0.28
RFC4-201ENST00000296273 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.31□□□□□ -0.28
RFC4-201ENST00000296273 ZNF594Q96JF6 807 aaPredicted RBP13.31□□□□□ -0.28
RFC4-201ENST00000296273 TEPSINQ96N21 525 aa13.31□□□□□ -0.28
RFC4-201ENST00000296273 TDRD3Q9H7E2 651 aaKnown RBP13.31□□□□□ -0.28
RFC4-201ENST00000296273 CSADQ9Y600 493 aa13.31□□□□□ -0.28
RFC4-201ENST00000296273 HTTP42858 3142 aa13.3□□□□□ -0.28
RFC4-201ENST00000296273 CCL15-CCL14A0A0B4J2E2 113 aa13.3□□□□□ -0.28
RFC4-201ENST00000296273 NPM3O75607 178 aaKnown RBP13.3□□□□□ -0.28
RFC4-201ENST00000296273 ALDH1L1O75891 902 aa13.3□□□□□ -0.28
RFC4-201ENST00000296273 CRKP46108 304 aa13.3□□□□□ -0.28
RFC4-201ENST00000296273 HDLBPQ00341 1268 aaKnown RBP13.3□□□□□ -0.28
RFC4-201ENST00000296273 EXOSC9Q06265 439 aaKnown RBP13.3□□□□□ -0.28
RFC4-201ENST00000296273 TAF1CQ15572 869 aaPredicted RBP13.3□□□□□ -0.28
RFC4-201ENST00000296273 CCL15Q16663 113 aa13.3□□□□□ -0.28
RFC4-201ENST00000296273 SLC9C1Q4G0N8 1177 aa13.3□□□□□ -0.28
RFC4-201ENST00000296273 EPHA10Q5JZY3 1008 aa13.3□□□□□ -0.28
RFC4-201ENST00000296273 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.3□□□□□ -0.285e-6■□□□□ 9.5
RFC4-201ENST00000296273 ZNF333Q96JL9 665 aa13.3□□□□□ -0.28
RFC4-201ENST00000296273 FAM84BQ96KN1 310 aaPredicted RBP13.3□□□□□ -0.28
RFC4-201ENST00000296273 ZCCHC17Q9NP64 241 aaKnown RBP13.3□□□□□ -0.28
RFC4-201ENST00000296273 ARAP2Q8WZ64 1704 aa13.3□□□□□ -0.28
RFC4-201ENST00000296273 OTOFQ9HC10 1997 aa13.29□□□□□ -0.28
RFC4-201ENST00000296273 TCP10L2B9ZVM9 353 aa13.29□□□□□ -0.28
RFC4-201ENST00000296273 EN2P19622 333 aaPredicted RBP13.29□□□□□ -0.28
RFC4-201ENST00000296273 GYG1P46976 350 aa13.29□□□□□ -0.28
RFC4-201ENST00000296273 VGLL4Q14135 290 aa13.29□□□□□ -0.28
RFC4-201ENST00000296273 VPS37DQ86XT2 251 aa13.29□□□□□ -0.28
RFC4-201ENST00000296273 TBC1D22AQ8WUA7 517 aa13.29□□□□□ -0.28
RFC4-201ENST00000296273 BRI3BPQ8WY22 251 aa13.29□□□□□ -0.28
RFC4-201ENST00000296273 HOOK2Q96ED9 719 aa13.29□□□□□ -0.28
RFC4-201ENST00000296273 MROH5Q6ZUA9 1318 aa13.29□□□□□ -0.28
RFC4-201ENST00000296273 GNRH1P01148 92 aa13.28□□□□□ -0.28
RFC4-201ENST00000296273 KIF22Q14807 665 aa13.28□□□□□ -0.28
RFC4-201ENST00000296273 SRCIN1Q9C0H9 1055 aa13.28□□□□□ -0.28
RFC4-201ENST00000296273 TMEM39BQ9GZU3 492 aa13.28□□□□□ -0.28
RFC4-201ENST00000296273 SPDYE5A6NIY4 337 aa13.27□□□□□ -0.29
RFC4-201ENST00000296273 TLR2O60603 784 aa13.27□□□□□ -0.29
RFC4-201ENST00000296273 CETPP11597 493 aa13.27□□□□□ -0.29
RFC4-201ENST00000296273 CAVIN4Q5BKX8 364 aa13.27□□□□□ -0.29
RFC4-201ENST00000296273 FAM83AQ86UY5 434 aa13.27□□□□□ -0.29
RFC4-201ENST00000296273 ERO1BQ86YB8 467 aa13.27□□□□□ -0.29
RFC4-201ENST00000296273 TEKT1Q969V4 418 aa13.27□□□□□ -0.29
RFC4-201ENST00000296273 OTUD5Q96G74 571 aa13.27□□□□□ -0.29
RFC4-201ENST00000296273 MRIQ9BWK5 157 aa13.27□□□□□ -0.29
RFC4-201ENST00000296273 TMOD2Q9NZR1 351 aa13.27□□□□□ -0.29
RFC4-201ENST00000296273 RIPOR2Q9Y4F9 1068 aa13.27□□□□□ -0.29
RFC4-201ENST00000296273 PTCH2Q9Y6C5 1203 aa13.27□□□□□ -0.29
RFC4-201ENST00000296273 FRAT2O75474 233 aaPredicted RBP13.26□□□□□ -0.29
RFC4-201ENST00000296273 PRMT2P55345 433 aa13.26□□□□□ -0.29
RFC4-201ENST00000296273 CAP1Q01518 475 aa13.26□□□□□ -0.29
RFC4-201ENST00000296273 SLC4A8Q2Y0W8 1093 aa13.26□□□□□ -0.29
RFC4-201ENST00000296273 FKBP1CQ5VVH2 108 aa13.26□□□□□ -0.29
RFC4-201ENST00000296273 FBXO33Q7Z6M2 555 aa13.26□□□□□ -0.29
RFC4-201ENST00000296273 CDAN1Q8IWY9 1227 aa13.26□□□□□ -0.29
RFC4-201ENST00000296273 FAM43AQ8N2R8 423 aa13.26□□□□□ -0.29
RFC4-201ENST00000296273 PPP4R2Q9NY27 417 aa13.26□□□□□ -0.29
RFC4-201ENST00000296273 SUGT1Q9Y2Z0 365 aa13.26□□□□□ -0.29
RFC4-201ENST00000296273 MKI67P46013 3256 aaKnown RBP13.26□□□□□ -0.29
RFC4-201ENST00000296273 MAST3O60307 1309 aa13.26□□□□□ -0.29
RFC4-201ENST00000296273 CENPFP49454 3210 aa13.25□□□□□ -0.29
RFC4-201ENST00000296273 KCNA4P22459 653 aa13.25□□□□□ -0.29
RFC4-201ENST00000296273 SNAPC2Q13487 334 aa13.25□□□□□ -0.29
RFC4-201ENST00000296273 SLC4A10Q6U841 1118 aa13.25□□□□□ -0.29
RFC4-201ENST00000296273 SUCLG2Q96I99 432 aa13.25□□□□□ -0.29
RFC4-201ENST00000296273 ZDHHC15Q96MV8 337 aa13.25□□□□□ -0.29
RFC4-201ENST00000296273 PUS3Q9BZE2 481 aaKnown RBP13.25□□□□□ -0.29
RFC4-201ENST00000296273 UTYO14607 1347 aa13.25□□□□□ -0.29
RFC4-201ENST00000296273 LACTBP83111 547 aaPredicted RBP13.24□□□□□ -0.29
RFC4-201ENST00000296273 RABL6Q3YEC7 729 aaPredicted RBP13.24□□□□□ -0.29
RFC4-201ENST00000296273 DCAF15Q66K64 600 aa13.24□□□□□ -0.29
RFC4-201ENST00000296273 WRNIP1Q96S55 665 aa13.24□□□□□ -0.29
RFC4-201ENST00000296273 RPAP1Q9BWH6 1393 aaPredicted RBP13.24□□□□□ -0.29
RFC4-201ENST00000296273 SNCAIPQ9Y6H5 919 aa13.24□□□□□ -0.29
RFC4-201ENST00000296273 KIF16BQ96L93 1317 aa13.23□□□□□ -0.29
RFC4-201ENST00000296273 PDE8BO95263 885 aa13.23□□□□□ -0.29
RFC4-201ENST00000296273 FXR1P51114 621 aaKnown RBP eCLIP13.23□□□□□ -0.29
RFC4-201ENST00000296273 CHAF1AQ13111 956 aaPredicted RBP13.23□□□□□ -0.29
RFC4-201ENST00000296273 PPIL2Q13356 520 aa13.23□□□□□ -0.29
RFC4-201ENST00000296273 METTL24Q5JXM2 366 aa13.23□□□□□ -0.29
RFC4-201ENST00000296273 KAZALD1Q96I82 304 aa13.23□□□□□ -0.29
RFC4-201ENST00000296273 SALL2Q9Y467 1007 aaPredicted RBP13.23□□□□□ -0.29
RFC4-201ENST00000296273 BRCA2P51587 3418 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 82.4 ms