RNA–Protein interactions for RNA: ENST00000296051.6

HPS3-201, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HPS3, Length 4,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-201ENST00000296051 XPO4Q9C0E2 1151 aaKnown RBP15.3■□□□□ 0.04
HPS3-201ENST00000296051 SSRP1Q08945 709 aaKnown RBP15.3■□□□□ 0.04
HPS3-201ENST00000296051 PDLIM2Q96JY6 352 aa15.3■□□□□ 0.04
HPS3-201ENST00000296051 JADE2Q9NQC1 790 aa15.3■□□□□ 0.04
HPS3-201ENST00000296051 PPARDQ03181 441 aa15.3■□□□□ 0.04
HPS3-201ENST00000296051 CUL4AQ13619 759 aa15.3■□□□□ 0.04
HPS3-201ENST00000296051 DBNDD2Q9BQY9 259 aa15.3■□□□□ 0.04
HPS3-201ENST00000296051 BEGAINQ9BUH8 593 aa15.3■□□□□ 0.04
HPS3-201ENST00000296051 ANKRD2Q9GZV1 360 aa15.3■□□□□ 0.04
HPS3-201ENST00000296051 GOLGA6L10A6NI86 522 aa15.29■□□□□ 0.04
HPS3-201ENST00000296051 ARID5BQ14865 1188 aa15.29■□□□□ 0.04
HPS3-201ENST00000296051 PARP10Q53GL7 1025 aa15.29■□□□□ 0.04
HPS3-201ENST00000296051 SEC62Q99442 399 aaKnown RBP15.29■□□□□ 0.04
HPS3-201ENST00000296051 PLCD4Q9BRC7 762 aa15.29■□□□□ 0.04
HPS3-201ENST00000296051 ZNF569Q5MCW4 686 aa15.29■□□□□ 0.04
HPS3-201ENST00000296051 RNF187Q5TA31 235 aaPredicted RBP15.29■□□□□ 0.04
HPS3-201ENST00000296051 ZNF772Q68DY9 489 aaPredicted RBP15.29■□□□□ 0.04
HPS3-201ENST00000296051 NEK11Q8NG66 645 aa15.29■□□□□ 0.04
HPS3-201ENST00000296051 FTOQ9C0B1 505 aaKnown RBP eCLIP15.29■□□□□ 0.04
HPS3-201ENST00000296051 MRVI1Q9Y6F6 885 aa15.29■□□□□ 0.04
HPS3-201ENST00000296051 GABPB1Q06547 395 aaPredicted RBP15.29■□□□□ 0.04
HPS3-201ENST00000296051 EAPPQ56P03 285 aaPredicted RBP15.29■□□□□ 0.04
HPS3-201ENST00000296051 ATP7AQ04656 1500 aa15.29■□□□□ 0.04
HPS3-201ENST00000296051 KCNQ4P56696 695 aa15.29■□□□□ 0.04
HPS3-201ENST00000296051 PPP2R3AQ06190 1150 aa15.29■□□□□ 0.04
HPS3-201ENST00000296051 TAX1BP1Q86VP1 789 aa15.29■□□□□ 0.04
HPS3-201ENST00000296051 CAPZA3Q96KX2 299 aa15.29■□□□□ 0.04
HPS3-201ENST00000296051 RAB34Q9BZG1 259 aa15.29■□□□□ 0.04
HPS3-201ENST00000296051 A0A0D9SFI3 127 aa15.28■□□□□ 0.04
HPS3-201ENST00000296051 FKBP15Q5T1M5 1219 aa15.28■□□□□ 0.04
HPS3-201ENST00000296051 ARHGAP30Q7Z6I6 1101 aaPredicted RBP15.28■□□□□ 0.04
HPS3-201ENST00000296051 FANCCQ00597 558 aa15.28■□□□□ 0.04
HPS3-201ENST00000296051 USP28Q96RU2 1077 aa15.28■□□□□ 0.04
HPS3-201ENST00000296051 SLC52A2Q9HAB3 445 aa15.28■□□□□ 0.04
HPS3-201ENST00000296051 SHTN1A0MZ66 631 aa15.28■□□□□ 0.04
HPS3-201ENST00000296051 IDEP14735 1019 aa15.28■□□□□ 0.04
HPS3-201ENST00000296051 GOLGA6L9A6NEM1 432 aa15.28■□□□□ 0.04
HPS3-201ENST00000296051 MNAT1P51948 309 aa15.28■□□□□ 0.04
HPS3-201ENST00000296051 DHX58Q96C10 678 aa15.28■□□□□ 0.04
HPS3-201ENST00000296051 EHMT1Q9H9B1 1298 aa15.28■□□□□ 0.04
HPS3-201ENST00000296051 PAG1Q9NWQ8 432 aa15.28■□□□□ 0.04
HPS3-201ENST00000296051 PLEKHG3A1L390 1219 aa15.27■□□□□ 0.04
HPS3-201ENST00000296051 CTAGE15A4D2H0 777 aa15.27■□□□□ 0.04
HPS3-201ENST00000296051 CTAGE8P0CG41 777 aa15.27■□□□□ 0.04
HPS3-201ENST00000296051 CTAGE6Q86UF2 777 aa15.27■□□□□ 0.04
HPS3-201ENST00000296051 CTAGE4Q8IX94 777 aa15.27■□□□□ 0.04
HPS3-201ENST00000296051 GOLGA1Q92805 767 aa15.27■□□□□ 0.04
HPS3-201ENST00000296051 CEP131Q9UPN4 1083 aa15.27■□□□□ 0.04
HPS3-201ENST00000296051 NEO1Q92859 1461 aa15.27■□□□□ 0.04
HPS3-201ENST00000296051 TMEM266Q2M3C6 531 aa15.27■□□□□ 0.04
HPS3-201ENST00000296051 ESR2Q92731 530 aa15.27■□□□□ 0.04
HPS3-201ENST00000296051 KCNQ3O43525 872 aa15.27■□□□□ 0.03
HPS3-201ENST00000296051 ZFYP08048 801 aaPredicted RBP15.27■□□□□ 0.03
HPS3-201ENST00000296051 ITGA6P23229 1130 aa15.27■□□□□ 0.03
HPS3-201ENST00000296051 SPA17Q15506 151 aa15.27■□□□□ 0.03
HPS3-201ENST00000296051 ARHGAP27Q6ZUM4 889 aa15.27■□□□□ 0.03
HPS3-201ENST00000296051 LRRC8AQ8IWT6 810 aa15.27■□□□□ 0.03
HPS3-201ENST00000296051 BAG1Q99933 345 aaPredicted RBP15.27■□□□□ 0.03
HPS3-201ENST00000296051 GGA1Q9UJY5 639 aa15.27■□□□□ 0.03
HPS3-201ENST00000296051 GUCA1BQ9UMX6 200 aa15.27■□□□□ 0.03
HPS3-201ENST00000296051 ERCC6L2Q5T890 1561 aa15.27■□□□□ 0.03
HPS3-201ENST00000296051 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.27■□□□□ 0.03
HPS3-201ENST00000296051 ZBTB43O43298 467 aa15.26■□□□□ 0.03
HPS3-201ENST00000296051 YEATS4O95619 227 aa15.26■□□□□ 0.03
HPS3-201ENST00000296051 WTAPQ15007 396 aa15.26■□□□□ 0.03
HPS3-201ENST00000296051 MAP9Q49MG5 647 aa15.26■□□□□ 0.03
HPS3-201ENST00000296051 BCCIPQ9P287 314 aaKnown RBP eCLIP15.26■□□□□ 0.03
HPS3-201ENST00000296051 CCDC175P0C221 793 aa15.26■□□□□ 0.03
HPS3-201ENST00000296051 ZFYVE9O95405 1425 aa15.26■□□□□ 0.03
HPS3-201ENST00000296051 SBNO1A3KN83 1393 aa15.26■□□□□ 0.03
HPS3-201ENST00000296051 MAGEB6P1A0A0J9YX57 407 aa15.26■□□□□ 0.03
HPS3-201ENST00000296051 TNNI2P48788 182 aa15.26■□□□□ 0.03
HPS3-201ENST00000296051 MYL5Q02045 173 aa15.26■□□□□ 0.03
HPS3-201ENST00000296051 EAF2Q96CJ1 260 aaPredicted RBP15.26■□□□□ 0.03
HPS3-201ENST00000296051 ATP2C2O75185 946 aa15.26■□□□□ 0.03
HPS3-201ENST00000296051 TAF5LO75529 589 aa15.26■□□□□ 0.03
HPS3-201ENST00000296051 LONRF3Q496Y0 759 aa15.26■□□□□ 0.03
HPS3-201ENST00000296051 MAGEB6Q8N7X4 407 aa15.26■□□□□ 0.03
HPS3-201ENST00000296051 GDAP1L1Q96MZ0 367 aa15.26■□□□□ 0.03
HPS3-201ENST00000296051 GTF2A1P52655 376 aaPredicted RBP15.25■□□□□ 0.03
HPS3-201ENST00000296051 UGGT1Q9NYU2 1555 aa15.25■□□□□ 0.03
HPS3-201ENST00000296051 GOLGA8FQ08AF8 430 aa15.25■□□□□ 0.03
HPS3-201ENST00000296051 GOLGA8DPQ0D2H9 430 aa15.25■□□□□ 0.03
HPS3-201ENST00000296051 PLBD2Q8NHP8 589 aa15.25■□□□□ 0.03
HPS3-201ENST00000296051 SSH3Q8TE77 659 aa15.25■□□□□ 0.03
HPS3-201ENST00000296051 RGS12O14924 1447 aa15.25■□□□□ 0.03
HPS3-201ENST00000296051 ZNF202O95125 648 aa15.25■□□□□ 0.03
HPS3-201ENST00000296051 GPIHBP1Q8IV16 184 aa15.25■□□□□ 0.03
HPS3-201ENST00000296051 MICALL1Q8N3F8 863 aa15.25■□□□□ 0.03
HPS3-201ENST00000296051 SUCLG2Q96I99 432 aa15.25■□□□□ 0.03
HPS3-201ENST00000296051 LSG1Q9H089 658 aaKnown RBP15.25■□□□□ 0.03
HPS3-201ENST00000296051 PLCG2P16885 1265 aa15.25■□□□□ 0.03
HPS3-201ENST00000296051 HIBADHP31937 336 aaKnown RBP15.25■□□□□ 0.03
HPS3-201ENST00000296051 TDRD12Q587J7 1177 aaKnown RBP15.25■□□□□ 0.03
HPS3-201ENST00000296051 IFIT1BQ5T764 474 aaKnown RBP15.25■□□□□ 0.03
HPS3-201ENST00000296051 ZNF594Q96JF6 807 aaPredicted RBP15.25■□□□□ 0.03
HPS3-201ENST00000296051 CA8P35219 290 aa15.24■□□□□ 0.03
HPS3-201ENST00000296051 TRMT44Q8IYL2 757 aaKnown RBP15.24■□□□□ 0.03
HPS3-201ENST00000296051 MPHOSPH6Q99547 160 aaKnown RBP15.24■□□□□ 0.03
HPS3-201ENST00000296051 ZFYVE16Q7Z3T8 1539 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms