RNA–Protein interactions for RNA: ENST00000292729.12

USP41-201, Transcript of ubiquitin specific peptidase 41, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene USP41, Length 920 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP41-201ENST00000292729 MYBBP1AQ9BQG0 1328 aaKnown RBP13.33□□□□□ -0.28
USP41-201ENST00000292729 GJB1P08034 283 aa13.32□□□□□ -0.28
USP41-201ENST00000292729 CAPN2P17655 700 aa13.32□□□□□ -0.28
USP41-201ENST00000292729 GCKRQ14397 625 aa13.32□□□□□ -0.28
USP41-201ENST00000292729 CNKSR2Q8WXI2 1034 aa13.32□□□□□ -0.28
USP41-201ENST00000292729 STK31Q9BXU1 1019 aa13.32□□□□□ -0.28
USP41-201ENST00000292729 MYH16Q9H6N6 1097 aa13.32□□□□□ -0.28
USP41-201ENST00000292729 AOX1Q06278 1338 aa13.32□□□□□ -0.28
USP41-201ENST00000292729 FAM205AQ6ZU69 1335 aa13.32□□□□□ -0.28
USP41-201ENST00000292729 RANBP2P49792 3224 aaKnown RBP13.31□□□□□ -0.28
USP41-201ENST00000292729 TAF5LO75529 589 aa13.31□□□□□ -0.28
USP41-201ENST00000292729 MNX1P50219 401 aaPredicted RBP13.31□□□□□ -0.28
USP41-201ENST00000292729 SNAPC2Q13487 334 aa13.31□□□□□ -0.28
USP41-201ENST00000292729 MTFR1Q15390 333 aa13.31□□□□□ -0.28
USP41-201ENST00000292729 UBE2Q1Q7Z7E8 422 aa13.31□□□□□ -0.28
USP41-201ENST00000292729 ERO1BQ86YB8 467 aa13.31□□□□□ -0.28
USP41-201ENST00000292729 TRIM47Q96LD4 638 aa13.31□□□□□ -0.28
USP41-201ENST00000292729 TDRD3Q9H7E2 651 aaKnown RBP13.31□□□□□ -0.28
USP41-201ENST00000292729 SRRDQ9UH36 339 aa13.31□□□□□ -0.28
USP41-201ENST00000292729 ADAMTS8Q9UP79 889 aa13.31□□□□□ -0.28
USP41-201ENST00000292729 MGAMO43451 1857 aa13.31□□□□□ -0.28
USP41-201ENST00000292729 BTBD19C9JJ37 291 aa13.3□□□□□ -0.28
USP41-201ENST00000292729 SNAP23O00161 211 aa13.3□□□□□ -0.28
USP41-201ENST00000292729 GRK4P32298 578 aa13.3□□□□□ -0.28
USP41-201ENST00000292729 CASP7P55210 303 aa13.3□□□□□ -0.28
USP41-201ENST00000292729 UBXN2AP68543 259 aa13.3□□□□□ -0.28
USP41-201ENST00000292729 IFIT5Q13325 482 aaKnown RBP13.3□□□□□ -0.28
USP41-201ENST00000292729 MFSD14BQ5SR56 506 aa13.3□□□□□ -0.28
USP41-201ENST00000292729 RAET1EQ8TD07 263 aa13.3□□□□□ -0.28
USP41-201ENST00000292729 HOOK2Q96ED9 719 aa13.3□□□□□ -0.28
USP41-201ENST00000292729 TTF2Q9UNY4 1162 aaKnown RBP13.3□□□□□ -0.28
USP41-201ENST00000292729 TCP10L2B9ZVM9 353 aa13.29□□□□□ -0.28
USP41-201ENST00000292729 ZBTB7BO15156 539 aaPredicted RBP13.29□□□□□ -0.28
USP41-201ENST00000292729 PSMC4P43686 418 aa13.29□□□□□ -0.28
USP41-201ENST00000292729 PPIL2Q13356 520 aa13.29□□□□□ -0.28
USP41-201ENST00000292729 C17orf99Q6UX52 265 aa13.29□□□□□ -0.28
USP41-201ENST00000292729 DZIP1LQ8IYY4 767 aaKnown RBP13.29□□□□□ -0.28
USP41-201ENST00000292729 TMEM39BQ9GZU3 492 aa13.29□□□□□ -0.28
USP41-201ENST00000292729 RIPOR2Q9Y4F9 1068 aa13.29□□□□□ -0.28
USP41-201ENST00000292729 SNCAIPQ9Y6H5 919 aa13.29□□□□□ -0.28
USP41-201ENST00000292729 IRF6O14896 467 aa13.28□□□□□ -0.28
USP41-201ENST00000292729 CCL5P13501 91 aa13.28□□□□□ -0.28
USP41-201ENST00000292729 CRKP46108 304 aa13.28□□□□□ -0.28
USP41-201ENST00000292729 CDAN1Q8IWY9 1227 aa13.28□□□□□ -0.28
USP41-201ENST00000292729 TDRD7Q8NHU6 1098 aaKnown RBP13.28□□□□□ -0.28
USP41-201ENST00000292729 RNF208Q9H0X6 261 aa13.28□□□□□ -0.28
USP41-201ENST00000292729 JAG2Q9Y219 1238 aa13.28□□□□□ -0.28
USP41-201ENST00000292729 FMNL1O95466 1100 aaPredicted RBP13.27□□□□□ -0.29
USP41-201ENST00000292729 OSBPP22059 807 aa13.27□□□□□ -0.29
USP41-201ENST00000292729 HDLBPQ00341 1268 aaKnown RBP13.27□□□□□ -0.29
USP41-201ENST00000292729 PPATQ06203 517 aa13.27□□□□□ -0.29
USP41-201ENST00000292729 GPR153Q6NV75 609 aa13.27□□□□□ -0.29
USP41-201ENST00000292729 ANKRD23Q86SG2 305 aa13.27□□□□□ -0.29
USP41-201ENST00000292729 LINS1Q8NG48 757 aa13.27□□□□□ -0.29
USP41-201ENST00000292729 WRNIP1Q96S55 665 aa13.27□□□□□ -0.29
USP41-201ENST00000292729 MYPNQ86TC9 1320 aa13.27□□□□□ -0.29
USP41-201ENST00000292729 CUL9Q8IWT3 2517 aa13.27□□□□□ -0.29
USP41-201ENST00000292729 FARP2O94887 1054 aaPredicted RBP13.26□□□□□ -0.29
USP41-201ENST00000292729 CTGFP29279 349 aa13.26□□□□□ -0.29
USP41-201ENST00000292729 DCAF15Q66K64 600 aa13.26□□□□□ -0.29
USP41-201ENST00000292729 FAM83AQ86UY5 434 aa13.26□□□□□ -0.29
USP41-201ENST00000292729 TSPYL6Q8N831 410 aa13.26□□□□□ -0.29
USP41-201ENST00000292729 SLAIN1Q8ND83 568 aa13.26□□□□□ -0.29
USP41-201ENST00000292729 U2AF1L4Q8WU68 220 aaKnown RBP13.26□□□□□ -0.29
USP41-201ENST00000292729 BIN2Q9UBW5 565 aaPredicted RBP13.26□□□□□ -0.29
USP41-201ENST00000292729 CPA4Q9UI42 421 aa13.26□□□□□ -0.29
USP41-201ENST00000292729 COL6A3P12111 3177 aa13.26□□□□□ -0.29
USP41-201ENST00000292729 APAF1O14727 1248 aa13.25□□□□□ -0.29
USP41-201ENST00000292729 EVI5O60447 810 aa13.25□□□□□ -0.29
USP41-201ENST00000292729 SGPL1O95470 568 aa13.25□□□□□ -0.29
USP41-201ENST00000292729 SLC4A2P04920 1241 aa13.25□□□□□ -0.29
USP41-201ENST00000292729 HIBADHP31937 336 aaKnown RBP13.25□□□□□ -0.29
USP41-201ENST00000292729 UBE4AQ14139 1066 aa13.25□□□□□ -0.29
USP41-201ENST00000292729 FKBP1CQ5VVH2 108 aa13.25□□□□□ -0.29
USP41-201ENST00000292729 LDHAL6AQ6ZMR3 332 aa13.25□□□□□ -0.29
USP41-201ENST00000292729 DNAAF4Q8WXU2 420 aa13.25□□□□□ -0.29
USP41-201ENST00000292729 ZKSCAN4Q969J2 545 aaPredicted RBP13.25□□□□□ -0.29
USP41-201ENST00000292729 TMOD2Q9NZR1 351 aa13.25□□□□□ -0.29
USP41-201ENST00000292729 CHMP3Q9Y3E7 222 aa13.25□□□□□ -0.29
USP41-201ENST00000292729 RPAP1Q9BWH6 1393 aaPredicted RBP13.24□□□□□ -0.29
USP41-201ENST00000292729 ADGRA2Q96PE1 1338 aa13.24□□□□□ -0.29
USP41-201ENST00000292729 AK9Q5TCS8 1911 aa13.24□□□□□ -0.29
USP41-201ENST00000292729 ALPK3Q96L96 1907 aa13.24□□□□□ -0.29
USP41-201ENST00000292729 PDHXO00330 501 aa13.24□□□□□ -0.29
USP41-201ENST00000292729 PLIN1O60240 522 aa13.24□□□□□ -0.29
USP41-201ENST00000292729 FCGRTP55899 365 aa13.24□□□□□ -0.29
USP41-201ENST00000292729 FOXO4P98177 505 aa13.24□□□□□ -0.29
USP41-201ENST00000292729 FLIIQ13045 1269 aa13.24□□□□□ -0.29
USP41-201ENST00000292729 CCDC57Q2TAC2 916 aa13.24□□□□□ -0.29
USP41-201ENST00000292729 TAF7LQ5H9L4 462 aa13.24□□□□□ -0.29
USP41-201ENST00000292729 G2E3Q7L622 706 aa13.24□□□□□ -0.29
USP41-201ENST00000292729 TBC1D22AQ8WUA7 517 aa13.24□□□□□ -0.29
USP41-201ENST00000292729 MRIQ9BWK5 157 aa13.24□□□□□ -0.29
USP41-201ENST00000292729 ZNF341Q9BYN7 854 aa13.24□□□□□ -0.29
USP41-201ENST00000292729 CNNM1Q9NRU3 951 aa13.24□□□□□ -0.29
USP41-201ENST00000292729 SOX1O00570 391 aaPredicted RBP13.23□□□□□ -0.29
USP41-201ENST00000292729 FKBP5Q13451 457 aaPredicted RBP13.23□□□□□ -0.29
USP41-201ENST00000292729 TWISTNBQ3B726 338 aaPredicted RBP13.23□□□□□ -0.29
USP41-201ENST00000292729 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.23□□□□□ -0.29
USP41-201ENST00000292729 TEKT1Q969V4 418 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms