RNA–Protein interactions for RNA: ENST00000292476.9

CPSF4-201, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CPSF4, Length 1,691 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-201ENST00000292476 CAVIN1Q6NZI2 390 aaKnown RBP19.92■□□□□ 0.78
CPSF4-201ENST00000292476 C15orf52Q6ZUT6 534 aaKnown RBP19.92■□□□□ 0.78
CPSF4-201ENST00000292476 ZNF589Q86UQ0 364 aaPredicted RBP19.92■□□□□ 0.78
CPSF4-201ENST00000292476 COL4A1P02462 1669 aa19.91■□□□□ 0.78
CPSF4-201ENST00000292476 IDH1O75874 414 aaKnown RBP19.91■□□□□ 0.78
CPSF4-201ENST00000292476 STYK1Q6J9G0 422 aa19.91■□□□□ 0.78
CPSF4-201ENST00000292476 PRPF40BQ6NWY9 871 aaKnown RBP19.91■□□□□ 0.78
CPSF4-201ENST00000292476 PI16Q6UXB8 463 aa19.91■□□□□ 0.78
CPSF4-201ENST00000292476 FAM84BQ96KN1 310 aaPredicted RBP19.91■□□□□ 0.78
CPSF4-201ENST00000292476 UPF3BQ9BZI7 483 aaKnown RBP19.91■□□□□ 0.78
CPSF4-201ENST00000292476 SLX4Q8IY92 1834 aa19.91■□□□□ 0.78
CPSF4-201ENST00000292476 TAF1P21675 1872 aa19.91■□□□□ 0.78
CPSF4-201ENST00000292476 GYG1P46976 350 aa19.91■□□□□ 0.78
CPSF4-201ENST00000292476 TSGA10IPQ3SY00 556 aa19.91■□□□□ 0.78
CPSF4-201ENST00000292476 CREB3L3Q68CJ9 461 aa19.91■□□□□ 0.78
CPSF4-201ENST00000292476 GPT2Q8TD30 523 aa19.91■□□□□ 0.78
CPSF4-201ENST00000292476 TRIM44Q96DX7 344 aaPredicted RBP19.91■□□□□ 0.78
CPSF4-201ENST00000292476 SP8Q8IXZ3 490 aa19.9■□□□□ 0.78
CPSF4-201ENST00000292476 CNKSR1Q969H4 720 aa19.9■□□□□ 0.78
CPSF4-201ENST00000292476 PIH1D3Q9NQM4 214 aaKnown RBP19.9■□□□□ 0.78
CPSF4-201ENST00000292476 PODXL2Q9NZ53 605 aa19.9■□□□□ 0.78
CPSF4-201ENST00000292476 CTNNA3Q9UI47 895 aa19.9■□□□□ 0.78
CPSF4-201ENST00000292476 LIMCH1Q9UPQ0 1083 aa19.9■□□□□ 0.78
CPSF4-201ENST00000292476 ZSCAN21Q9Y5A6 473 aaPredicted RBP19.9■□□□□ 0.78
CPSF4-201ENST00000292476 MAST3O60307 1309 aa19.89■□□□□ 0.78
CPSF4-201ENST00000292476 SEC62Q99442 399 aaKnown RBP19.89■□□□□ 0.77
CPSF4-201ENST00000292476 LRP2BPQ9P2M1 347 aa19.89■□□□□ 0.77
CPSF4-201ENST00000292476 C21orf2O43822 256 aa19.88■□□□□ 0.77
CPSF4-201ENST00000292476 ZNF804AQ7Z570 1209 aa19.88■□□□□ 0.77
CPSF4-201ENST00000292476 TMEM87AQ8NBN3 555 aa19.88■□□□□ 0.77
CPSF4-201ENST00000292476 OSBP2Q969R2 916 aa19.88■□□□□ 0.77
CPSF4-201ENST00000292476 SYAP1Q96A49 352 aaPredicted RBP19.88■□□□□ 0.77
CPSF4-201ENST00000292476 ZSCAN31Q96LW9 406 aaPredicted RBP19.88■□□□□ 0.77
CPSF4-201ENST00000292476 GGA1Q9UJY5 639 aa19.88■□□□□ 0.77
CPSF4-201ENST00000292476 PPEF1O14829 653 aaPredicted RBP19.87■□□□□ 0.77
CPSF4-201ENST00000292476 SLC27A2O14975 620 aa19.87■□□□□ 0.77
CPSF4-201ENST00000292476 PDIA4P13667 645 aaKnown RBP19.87■□□□□ 0.77
CPSF4-201ENST00000292476 PDE6AP16499 860 aa19.87■□□□□ 0.77
CPSF4-201ENST00000292476 NCLP19338 710 aaKnown RBP19.87■□□□□ 0.77
CPSF4-201ENST00000292476 VPS53Q5VIR6 699 aa19.87■□□□□ 0.77
CPSF4-201ENST00000292476 SH2B1Q9NRF2 756 aaPredicted RBP19.87■□□□□ 0.77
CPSF4-201ENST00000292476 NSFL1CQ9UNZ2 370 aaKnown RBP19.87■□□□□ 0.77
CPSF4-201ENST00000292476 ESPNB1AK53 854 aa19.87■□□□□ 0.77
CPSF4-201ENST00000292476 HSPD1P10809 573 aaKnown RBP19.87■□□□□ 0.77
CPSF4-201ENST00000292476 CCDC129Q6ZRS4 1044 aa19.87■□□□□ 0.77
CPSF4-201ENST00000292476 CYP46A1Q9Y6A2 500 aa19.87■□□□□ 0.77
CPSF4-201ENST00000292476 ZNF532Q9HCE3 1301 aa19.86■□□□□ 0.77
CPSF4-201ENST00000292476 MYH7P12883 1935 aa19.86■□□□□ 0.77
CPSF4-201ENST00000292476 HS1BP3Q53T59 392 aa19.86■□□□□ 0.77
CPSF4-201ENST00000292476 LRSAM1Q6UWE0 723 aa19.86■□□□□ 0.77
CPSF4-201ENST00000292476 RASEFQ8IZ41 740 aa19.86■□□□□ 0.77
CPSF4-201ENST00000292476 ATP6V0A2Q9Y487 856 aa19.86■□□□□ 0.77
CPSF4-201ENST00000292476 RPAP1Q9BWH6 1393 aaPredicted RBP19.86■□□□□ 0.77
CPSF4-201ENST00000292476 M0R2C6 588 aa19.85■□□□□ 0.77
CPSF4-201ENST00000292476 AK2P54819 239 aa19.85■□□□□ 0.77
CPSF4-201ENST00000292476 GPSM2P81274 684 aa19.85■□□□□ 0.77
CPSF4-201ENST00000292476 RASSF7Q02833 373 aa19.85■□□□□ 0.77
CPSF4-201ENST00000292476 SPTY2D1Q68D10 685 aaPredicted RBP19.85■□□□□ 0.77
CPSF4-201ENST00000292476 ZSWIM6Q9HCJ5 1215 aa19.85■□□□□ 0.77
CPSF4-201ENST00000292476 GPAA1O43292 621 aa19.84■□□□□ 0.77
CPSF4-201ENST00000292476 HMGB1P09429 215 aaKnown RBP19.84■□□□□ 0.77
CPSF4-201ENST00000292476 GNAT2P19087 354 aa19.84■□□□□ 0.77
CPSF4-201ENST00000292476 AIDAQ96BJ3 306 aa19.84■□□□□ 0.77
CPSF4-201ENST00000292476 JAKMIP1Q96N16 626 aaKnown RBP19.84■□□□□ 0.77
CPSF4-201ENST00000292476 PUS7LQ9H0K6 701 aaKnown RBP19.84■□□□□ 0.77
CPSF4-201ENST00000292476 TCRBV5S4A2TA0A5A2 114 aa19.84■□□□□ 0.77
CPSF4-201ENST00000292476 UFL1O94874 794 aa19.84■□□□□ 0.77
CPSF4-201ENST00000292476 CASTP20810 708 aaKnown RBP19.84■□□□□ 0.77
CPSF4-201ENST00000292476 OLFM4Q6UX06 510 aa19.84■□□□□ 0.77
CPSF4-201ENST00000292476 RUFY3Q7L099 469 aa19.84■□□□□ 0.77
CPSF4-201ENST00000292476 MAGEB6Q8N7X4 407 aa19.84■□□□□ 0.77
CPSF4-201ENST00000292476 WDR66Q8TBY9 1149 aa19.84■□□□□ 0.77
CPSF4-201ENST00000292476 ABCF2Q9UG63 623 aa19.84■□□□□ 0.77
CPSF4-201ENST00000292476 ATP6V1DQ9Y5K8 247 aa19.84■□□□□ 0.77
CPSF4-201ENST00000292476 DOCK2Q92608 1830 aa19.84■□□□□ 0.77
CPSF4-201ENST00000292476 IRS2Q9Y4H2 1338 aa19.84■□□□□ 0.77
CPSF4-201ENST00000292476 CHGBP05060 677 aa19.83■□□□□ 0.76
CPSF4-201ENST00000292476 ANKRD1Q15327 319 aa19.83■□□□□ 0.76
CPSF4-201ENST00000292476 BLOC1S2Q6QNY1 142 aa19.83■□□□□ 0.76
CPSF4-201ENST00000292476 NOL8Q76FK4 1167 aaKnown RBP19.83■□□□□ 0.76
CPSF4-201ENST00000292476 RAI14Q9P0K7 980 aa19.83■□□□□ 0.76
CPSF4-201ENST00000292476 TMEM63CQ9P1W3 806 aa19.83■□□□□ 0.76
CPSF4-201ENST00000292476 IMMTQ16891 758 aaKnown RBP19.82■□□□□ 0.76
CPSF4-201ENST00000292476 ALDH8A1Q9H2A2 487 aaPredicted RBP19.82■□□□□ 0.76
CPSF4-201ENST00000292476 IQSEC3Q9UPP2 1182 aaPredicted RBP19.82■□□□□ 0.76
CPSF4-201ENST00000292476 SBF1O95248 1867 aa19.82■□□□□ 0.76
CPSF4-201ENST00000292476 FER1L6Q2WGJ9 1857 aa19.81■□□□□ 0.76
CPSF4-201ENST00000292476 NFKBIEO00221 500 aa19.81■□□□□ 0.76
CPSF4-201ENST00000292476 ZSCAN22P10073 491 aaPredicted RBP19.81■□□□□ 0.76
CPSF4-201ENST00000292476 SLC51AQ86UW1 340 aa19.81■□□□□ 0.76
CPSF4-201ENST00000292476 TDRD7Q8NHU6 1098 aaKnown RBP19.81■□□□□ 0.76
CPSF4-201ENST00000292476 PDRG1Q9NUG6 133 aa19.81■□□□□ 0.76
CPSF4-201ENST00000292476 SALL1Q9NSC2 1324 aa19.81■□□□□ 0.76
CPSF4-201ENST00000292476 WTIPA6NIX2 430 aaPredicted RBP19.81■□□□□ 0.76
CPSF4-201ENST00000292476 SLFNL1Q499Z3 407 aa19.81■□□□□ 0.76
CPSF4-201ENST00000292476 C9orf131Q5VYM1 1079 aa19.81■□□□□ 0.76
CPSF4-201ENST00000292476 TBC1D16Q8TBP0 767 aa19.81■□□□□ 0.76
CPSF4-201ENST00000292476 C7orf43Q8WVR3 580 aa19.81■□□□□ 0.76
CPSF4-201ENST00000292476 PDLIM2Q96JY6 352 aa19.81■□□□□ 0.76
CPSF4-201ENST00000292476 SMC3Q9UQE7 1217 aa19.81■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 82 ms