RNA–Protein interactions for RNA: ENST00000288986.6

NCK1-201, Transcript of NCK adaptor protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NCK1, Length 1,937 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1-201ENST00000288986 SUGT1Q9Y2Z0 365 aa18.69■□□□□ 0.58
NCK1-201ENST00000288986 RBM5P52756 815 aaKnown RBP eCLIP18.68■□□□□ 0.58
NCK1-201ENST00000288986 ZNF280AP59817 542 aaPredicted RBP18.68■□□□□ 0.58
NCK1-201ENST00000288986 SPTY2D1Q68D10 685 aaPredicted RBP18.68■□□□□ 0.58
NCK1-201ENST00000288986 PNMA8AQ86V59 439 aaPredicted RBP18.68■□□□□ 0.58
NCK1-201ENST00000288986 MYOZ2Q9NPC6 264 aa18.68■□□□□ 0.58
NCK1-201ENST00000288986 TTC41PQ6P2S7 1318 aa18.68■□□□□ 0.58
NCK1-201ENST00000288986 MYH13Q9UKX3 1938 aa18.68■□□□□ 0.58
NCK1-201ENST00000288986 MMP14P50281 582 aa18.68■□□□□ 0.58
NCK1-201ENST00000288986 ERICH6Q7L0X2 663 aa18.68■□□□□ 0.58
NCK1-201ENST00000288986 ERC2O15083 957 aa18.67■□□□□ 0.58
NCK1-201ENST00000288986 EGFRP00533 1210 aa18.67■□□□□ 0.58
NCK1-201ENST00000288986 USP50Q70EL3 339 aaPredicted RBP18.67■□□□□ 0.58
NCK1-201ENST00000288986 KIF3CO14782 793 aa18.66■□□□□ 0.58
NCK1-201ENST00000288986 KIF4BQ2VIQ3 1234 aa18.66■□□□□ 0.58
NCK1-201ENST00000288986 DZIP1Q86YF9 867 aaKnown RBP18.66■□□□□ 0.58
NCK1-201ENST00000288986 TRPM4Q8TD43 1214 aa18.66■□□□□ 0.58
NCK1-201ENST00000288986 ANTXR1Q9H6X2 564 aa18.66■□□□□ 0.58
NCK1-201ENST00000288986 RAI14Q9P0K7 980 aa18.66■□□□□ 0.58
NCK1-201ENST00000288986 CLEC11AQ9Y240 323 aa18.66■□□□□ 0.58
NCK1-201ENST00000288986 SCN4AP35499 1836 aa18.66■□□□□ 0.58
NCK1-201ENST00000288986 MAST3O60307 1309 aa18.66■□□□□ 0.58
NCK1-201ENST00000288986 GOLIM4O00461 696 aa18.66■□□□□ 0.58
NCK1-201ENST00000288986 PDE1AP54750 535 aa18.66■□□□□ 0.58
NCK1-201ENST00000288986 TTC22Q5TAA0 569 aa18.66■□□□□ 0.58
NCK1-201ENST00000288986 HAUS7Q99871 368 aa18.66■□□□□ 0.58
NCK1-201ENST00000288986 ZNF646O15015 1829 aaPredicted RBP18.66■□□□□ 0.58
NCK1-201ENST00000288986 GLRX3O76003 335 aaKnown RBP18.65■□□□□ 0.58
NCK1-201ENST00000288986 HIRAP54198 1017 aaPredicted RBP18.65■□□□□ 0.58
NCK1-201ENST00000288986 TTF1Q15361 905 aaPredicted RBP18.65■□□□□ 0.58
NCK1-201ENST00000288986 DLGAP5Q15398 846 aa18.65■□□□□ 0.58
NCK1-201ENST00000288986 TEKT1Q969V4 418 aa18.65■□□□□ 0.58
NCK1-201ENST00000288986 PIH1D3Q9NQM4 214 aaKnown RBP18.65■□□□□ 0.58
NCK1-201ENST00000288986 PAG1Q9NWQ8 432 aa18.65■□□□□ 0.58
NCK1-201ENST00000288986 STAP2Q9UGK3 403 aa18.65■□□□□ 0.58
NCK1-201ENST00000288986 SERPINA10Q9UK55 444 aa18.65■□□□□ 0.58
NCK1-201ENST00000288986 IDH1O75874 414 aaKnown RBP18.64■□□□□ 0.58
NCK1-201ENST00000288986 POTEIP0CG38 1075 aa18.64■□□□□ 0.58
NCK1-201ENST00000288986 POTEJP0CG39 1038 aa18.64■□□□□ 0.58
NCK1-201ENST00000288986 GSPT1P15170 499 aaKnown RBP18.64■□□□□ 0.58
NCK1-201ENST00000288986 CRKP46108 304 aa18.64■□□□□ 0.58
NCK1-201ENST00000288986 CFAP100Q494V2 611 aa18.64■□□□□ 0.58
NCK1-201ENST00000288986 PI4K2BQ8TCG2 481 aa18.64■□□□□ 0.58
NCK1-201ENST00000288986 EDC3Q96F86 508 aaKnown RBP18.64■□□□□ 0.58
NCK1-201ENST00000288986 AKAP11Q9UKA4 1901 aa18.64■□□□□ 0.57
NCK1-201ENST00000288986 MECOMQ03112 1051 aa18.64■□□□□ 0.57
NCK1-201ENST00000288986 DIXDC1Q155Q3 683 aa18.64■□□□□ 0.57
NCK1-201ENST00000288986 PCDHAC2Q9Y5I4 1007 aa18.64■□□□□ 0.57
NCK1-201ENST00000288986 AOX1Q06278 1338 aa18.64■□□□□ 0.57
NCK1-201ENST00000288986 WNT10BO00744 389 aa18.63■□□□□ 0.57
NCK1-201ENST00000288986 MAP4K4O95819 1239 aaPredicted RBP18.63■□□□□ 0.57
NCK1-201ENST00000288986 HDLBPQ00341 1268 aaKnown RBP18.63■□□□□ 0.57
NCK1-201ENST00000288986 NBPF9Q3BBW0 867 aa18.63■□□□□ 0.57
NCK1-201ENST00000288986 MRIQ9BWK5 157 aa18.63■□□□□ 0.57
NCK1-201ENST00000288986 NSUN4Q96CB9 384 aaKnown RBP18.62■□□□□ 0.57
NCK1-201ENST00000288986 MAP3K12Q12852 859 aa18.62■□□□□ 0.57
NCK1-201ENST00000288986 HHIPL2Q6UWX4 724 aa18.62■□□□□ 0.57
NCK1-201ENST00000288986 SLF2Q8IX21 1173 aa18.62■□□□□ 0.57
NCK1-201ENST00000288986 PRMT6Q96LA8 375 aaPredicted RBP18.62■□□□□ 0.57
NCK1-201ENST00000288986 SPDYE2BA6NHP3 402 aa18.61■□□□□ 0.57
NCK1-201ENST00000288986 TOMM70O94826 608 aa18.61■□□□□ 0.57
NCK1-201ENST00000288986 SPDYE6P0CI01 402 aa18.61■□□□□ 0.57
NCK1-201ENST00000288986 LDHDQ86WU2 507 aa18.61■□□□□ 0.57
NCK1-201ENST00000288986 MTMR14Q8NCE2 650 aa18.61■□□□□ 0.57
NCK1-201ENST00000288986 MYO1BO43795 1136 aa18.61■□□□□ 0.57
NCK1-201ENST00000288986 SEC24BO95487 1268 aa18.61■□□□□ 0.57
NCK1-201ENST00000288986 GSTO1P78417 241 aa18.61■□□□□ 0.57
NCK1-201ENST00000288986 NAA16Q6N069 864 aaPredicted RBP18.61■□□□□ 0.57
NCK1-201ENST00000288986 ZC3H15Q8WU90 426 aaKnown RBP18.61■□□□□ 0.57
NCK1-201ENST00000288986 ZNF384Q8TF68 577 aa18.6■□□□□ 0.57
NCK1-201ENST00000288986 ZDHHC15Q96MV8 337 aa18.6■□□□□ 0.57
NCK1-201ENST00000288986 ASTN2O75129 1339 aaPredicted RBP18.6■□□□□ 0.57
NCK1-201ENST00000288986 LDHCP07864 332 aa18.59■□□□□ 0.57
NCK1-201ENST00000288986 SLC9C2Q5TAH2 1124 aa18.59■□□□□ 0.57
NCK1-201ENST00000288986 ANGEL2Q5VTE6 544 aaKnown RBP18.59■□□□□ 0.57
NCK1-201ENST00000288986 MAGEB6Q8N7X4 407 aa18.59■□□□□ 0.57
NCK1-201ENST00000288986 ZBED3Q96IU2 234 aaPredicted RBP18.59■□□□□ 0.57
NCK1-201ENST00000288986 GGA3Q9NZ52 723 aa18.59■□□□□ 0.57
NCK1-201ENST00000288986 DAGLAQ9Y4D2 1042 aa18.59■□□□□ 0.57
NCK1-201ENST00000288986 IGSF3O75054 1194 aa18.59■□□□□ 0.57
NCK1-201ENST00000288986 MAP1SQ66K74 1059 aaPredicted RBP18.59■□□□□ 0.57
NCK1-201ENST00000288986 APOBEC3HQ6NTF7 200 aaKnown RBP18.59■□□□□ 0.57
NCK1-201ENST00000288986 DCPSQ96C86 337 aaKnown RBP18.59■□□□□ 0.57
NCK1-201ENST00000288986 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.59■□□□□ 0.57
NCK1-201ENST00000288986 TDRD3Q9H7E2 651 aaKnown RBP18.59■□□□□ 0.57
NCK1-201ENST00000288986 CLRN2A0PK11 232 aa18.58■□□□□ 0.56
NCK1-201ENST00000288986 TRIM6-TRIM34B2RNG4 842 aa18.58■□□□□ 0.56
NCK1-201ENST00000288986 CHADLQ6NUI6 762 aa18.58■□□□□ 0.56
NCK1-201ENST00000288986 FAM163AQ96GL9 167 aaPredicted RBP18.58■□□□□ 0.56
NCK1-201ENST00000288986 MROH7-TTC4A0A0A0MT08 1334 aa18.57■□□□□ 0.56
NCK1-201ENST00000288986 CYP7A1P22680 504 aa18.57■□□□□ 0.56
NCK1-201ENST00000288986 PGAP2Q9UHJ9 254 aa18.57■□□□□ 0.56
NCK1-201ENST00000288986 SCAF8Q9UPN6 1271 aaKnown RBP18.57■□□□□ 0.56
NCK1-201ENST00000288986 KBTBD3Q8NAB2 608 aa18.57■□□□□ 0.56
NCK1-201ENST00000288986 SMC1BQ8NDV3 1235 aa18.57■□□□□ 0.56
NCK1-201ENST00000288986 RBM46Q8TBY0 533 aaKnown RBP18.57■□□□□ 0.56
NCK1-201ENST00000288986 VEZTQ9HBM0 779 aa18.57■□□□□ 0.56
NCK1-201ENST00000288986 GAKO14976 1311 aa18.56■□□□□ 0.56
NCK1-201ENST00000288986 PDE6AP16499 860 aa18.56■□□□□ 0.56
NCK1-201ENST00000288986 SDSP20132 328 aa18.56■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms