RNA–Protein interactions for RNA: ENST00000288839.6

SSX2B-201, Transcript of SSX family member 2B, humanhuman

TSL 3

Gene SSX2B, Length 801 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2B-201ENST00000288839 LPIN2Q92539 896 aa8.45□□□□□ -1.06
SSX2B-201ENST00000288839 NOP58Q9Y2X3 529 aaKnown RBP8.45□□□□□ -1.06
SSX2B-201ENST00000288839 HMMRO75330 724 aa8.44□□□□□ -1.06
SSX2B-201ENST00000288839 ITGBL1O95965 494 aaPredicted RBP8.44□□□□□ -1.06
SSX2B-201ENST00000288839 IL1R1P14778 569 aa8.44□□□□□ -1.06
SSX2B-201ENST00000288839 LMOD1P29536 600 aaPredicted RBP8.44□□□□□ -1.06
SSX2B-201ENST00000288839 PHKA1P46020 1223 aa8.44□□□□□ -1.06
SSX2B-201ENST00000288839 CHAF1AQ13111 956 aaPredicted RBP8.44□□□□□ -1.06
SSX2B-201ENST00000288839 CAVIN4Q5BKX8 364 aa8.44□□□□□ -1.06
SSX2B-201ENST00000288839 DACT2Q5SW24 774 aa8.44□□□□□ -1.06
SSX2B-201ENST00000288839 TTLL5Q6EMB2 1281 aa8.44□□□□□ -1.06
SSX2B-201ENST00000288839 RSBN1LQ6PCB5 846 aaPredicted RBP8.44□□□□□ -1.06
SSX2B-201ENST00000288839 VPS37DQ86XT2 251 aa8.44□□□□□ -1.06
SSX2B-201ENST00000288839 MICALL2Q8IY33 904 aa8.44□□□□□ -1.06
SSX2B-201ENST00000288839 TDRD7Q8NHU6 1098 aaKnown RBP8.44□□□□□ -1.06
SSX2B-201ENST00000288839 EXOC6Q8TAG9 804 aa8.44□□□□□ -1.06
SSX2B-201ENST00000288839 BCL11AQ9H165 835 aa8.44□□□□□ -1.06
SSX2B-201ENST00000288839 GPRC5DQ9NZD1 345 aa8.44□□□□□ -1.06
SSX2B-201ENST00000288839 CNOT7Q9UIV1 285 aaKnown RBP8.44□□□□□ -1.06
SSX2B-201ENST00000288839 PCDHB15Q9Y5E8 787 aa8.44□□□□□ -1.06
SSX2B-201ENST00000288839 ASTN2O75129 1339 aaPredicted RBP8.44□□□□□ -1.06
SSX2B-201ENST00000288839 ZNF609O15014 1411 aa8.44□□□□□ -1.06
SSX2B-201ENST00000288839 PSME4Q14997 1843 aa8.43□□□□□ -1.06
SSX2B-201ENST00000288839 A0A1B0GUL7 405 aa8.43□□□□□ -1.06
SSX2B-201ENST00000288839 FRAT2O75474 233 aaPredicted RBP8.43□□□□□ -1.06
SSX2B-201ENST00000288839 HIRAP54198 1017 aaPredicted RBP8.43□□□□□ -1.06
SSX2B-201ENST00000288839 STRIP1Q5VSL9 837 aa8.43□□□□□ -1.06
SSX2B-201ENST00000288839 SAMD7Q7Z3H4 446 aa8.43□□□□□ -1.06
SSX2B-201ENST00000288839 CDAN1Q8IWY9 1227 aa8.43□□□□□ -1.06
SSX2B-201ENST00000288839 XAGE2Q96GT9 111 aa8.43□□□□□ -1.06
SSX2B-201ENST00000288839 NEUROD6Q96NK8 337 aa8.43□□□□□ -1.06
SSX2B-201ENST00000288839 GMLQ99445 158 aa8.43□□□□□ -1.06
SSX2B-201ENST00000288839 GLIS2Q9BZE0 524 aaPredicted RBP8.43□□□□□ -1.06
SSX2B-201ENST00000288839 AKAP2Q9Y2D5 859 aa8.43□□□□□ -1.06
SSX2B-201ENST00000288839 F8W031 263 aaPredicted RBP8.42□□□□□ -1.06
SSX2B-201ENST00000288839 RPS12P25398 132 aaKnown RBP8.42□□□□□ -1.06
SSX2B-201ENST00000288839 TBC1D10BQ4KMP7 808 aaPredicted RBP8.42□□□□□ -1.06
SSX2B-201ENST00000288839 TNNI3KQ59H18 835 aa8.42□□□□□ -1.06
SSX2B-201ENST00000288839 RBM26Q5T8P6 1007 aaKnown RBP8.42□□□□□ -1.06
SSX2B-201ENST00000288839 CCDC102BQ68D86 513 aa8.42□□□□□ -1.06
SSX2B-201ENST00000288839 CNTROBQ8N137 903 aa8.42□□□□□ -1.06
SSX2B-201ENST00000288839 CERS5Q8N5B7 392 aa8.42□□□□□ -1.06
SSX2B-201ENST00000288839 AGBL3Q8NEM8 1001 aa8.42□□□□□ -1.06
SSX2B-201ENST00000288839 DPF2Q92785 391 aa8.42□□□□□ -1.06
SSX2B-201ENST00000288839 IL1RAPL2Q9NP60 686 aa8.42□□□□□ -1.06
SSX2B-201ENST00000288839 TLR7Q9NYK1 1049 aaKnown RBP8.42□□□□□ -1.06
SSX2B-201ENST00000288839 SCAF8Q9UPN6 1271 aaKnown RBP8.42□□□□□ -1.06
SSX2B-201ENST00000288839 FPGT-TNNI3KV9GXZ4 949 aa8.42□□□□□ -1.06
SSX2B-201ENST00000288839 CNTNAP1P78357 1384 aa8.42□□□□□ -1.06
SSX2B-201ENST00000288839 THSD7BQ9C0I4 1608 aa8.41□□□□□ -1.06
SSX2B-201ENST00000288839 COL1A1P02452 1464 aaPredicted RBP8.41□□□□□ -1.06
SSX2B-201ENST00000288839 FAM205AQ6ZU69 1335 aa8.41□□□□□ -1.06
SSX2B-201ENST00000288839 ADM5C9JUS6 153 aa8.41□□□□□ -1.06
SSX2B-201ENST00000288839 H7C1D1 291 aa8.41□□□□□ -1.06
SSX2B-201ENST00000288839 SMARCA5O60264 1052 aaPredicted RBP8.41□□□□□ -1.06
SSX2B-201ENST00000288839 GRIK5Q16478 980 aa8.41□□□□□ -1.06
SSX2B-201ENST00000288839 HSP90AB4PQ58FF6 505 aa8.41□□□□□ -1.06
SSX2B-201ENST00000288839 MFSD14BQ5SR56 506 aa8.41□□□□□ -1.06
SSX2B-201ENST00000288839 GORABQ5T7V8 394 aa8.41□□□□□ -1.06
SSX2B-201ENST00000288839 PNMA8AQ86V59 439 aaPredicted RBP8.41□□□□□ -1.06
SSX2B-201ENST00000288839 ERC1Q8IUD2 1116 aa8.41□□□□□ -1.06
SSX2B-201ENST00000288839 KIAA0825Q8IV33 1275 aa8.41□□□□□ -1.06
SSX2B-201ENST00000288839 JMYQ8N9B5 988 aa8.41□□□□□ -1.06
SSX2B-201ENST00000288839 RHPN1Q8TCX5 695 aa8.41□□□□□ -1.06
SSX2B-201ENST00000288839 EAF2Q96CJ1 260 aaPredicted RBP8.41□□□□□ -1.06
SSX2B-201ENST00000288839 MS4A4AQ96JQ5 239 aa8.41□□□□□ -1.06
SSX2B-201ENST00000288839 DBNDD2Q9BQY9 259 aa8.41□□□□□ -1.06
SSX2B-201ENST00000288839 CCDC8Q9H0W5 538 aaPredicted RBP8.41□□□□□ -1.06
SSX2B-201ENST00000288839 ADARB2Q9NS39 739 aaKnown RBP8.41□□□□□ -1.06
SSX2B-201ENST00000288839 ARAP2Q8WZ64 1704 aa8.4□□□□□ -1.06
SSX2B-201ENST00000288839 RAB11FIP3O75154 756 aa8.4□□□□□ -1.06
SSX2B-201ENST00000288839 USP17L8P0C7I0 530 aa8.4□□□□□ -1.06
SSX2B-201ENST00000288839 HSPA1AP0DMV8 641 aaKnown RBP8.4□□□□□ -1.06
SSX2B-201ENST00000288839 HSPA1BP0DMV9 641 aaKnown RBP8.4□□□□□ -1.06
SSX2B-201ENST00000288839 VEGFBP49765 207 aa8.4□□□□□ -1.06
SSX2B-201ENST00000288839 ZNF280AP59817 542 aaPredicted RBP8.4□□□□□ -1.06
SSX2B-201ENST00000288839 GRM1Q13255 1194 aa8.4□□□□□ -1.06
SSX2B-201ENST00000288839 RASGRF1Q13972 1273 aa8.4□□□□□ -1.06
SSX2B-201ENST00000288839 SCARF1Q14162 830 aa8.4□□□□□ -1.06
SSX2B-201ENST00000288839 KIF4BQ2VIQ3 1234 aa8.4□□□□□ -1.06
SSX2B-201ENST00000288839 PI16Q6UXB8 463 aa8.4□□□□□ -1.06
SSX2B-201ENST00000288839 AACSQ86V21 672 aa8.4□□□□□ -1.06
SSX2B-201ENST00000288839 KIF1BPQ96EK5 621 aa8.4□□□□□ -1.06
SSX2B-201ENST00000288839 ZNF408Q9H9D4 720 aa8.4□□□□□ -1.06
SSX2B-201ENST00000288839 GPR108Q9NPR9 543 aa8.4□□□□□ -1.06
SSX2B-201ENST00000288839 GNL3LQ9NVN8 582 aaKnown RBP8.4□□□□□ -1.06
SSX2B-201ENST00000288839 DBNLQ9UJU6 430 aaKnown RBP8.4□□□□□ -1.06
SSX2B-201ENST00000288839 TRPM7Q96QT4 1865 aa8.4□□□□□ -1.07
SSX2B-201ENST00000288839 MYO3BQ8WXR4 1341 aa8.39□□□□□ -1.07
SSX2B-201ENST00000288839 TMEM88BA6NKF7 163 aa8.39□□□□□ -1.07
SSX2B-201ENST00000288839 FKBP1AP62942 108 aaKnown RBP8.39□□□□□ -1.07
SSX2B-201ENST00000288839 COL13A1Q5TAT6 717 aaPredicted RBP8.39□□□□□ -1.07
SSX2B-201ENST00000288839 CST9Q5W186 159 aa8.39□□□□□ -1.07
SSX2B-201ENST00000288839 USP50Q70EL3 339 aaPredicted RBP8.39□□□□□ -1.07
SSX2B-201ENST00000288839 DCTPP1Q9H773 170 aa8.39□□□□□ -1.07
SSX2B-201ENST00000288839 MYOZ2Q9NPC6 264 aa8.39□□□□□ -1.07
SSX2B-201ENST00000288839 TAOK2Q9UL54 1235 aa8.39□□□□□ -1.07
SSX2B-201ENST00000288839 ABT1Q9ULW3 272 aaKnown RBP8.39□□□□□ -1.07
SSX2B-201ENST00000288839 PCDHAC2Q9Y5I4 1007 aa8.39□□□□□ -1.07
SSX2B-201ENST00000288839 ST18O60284 1047 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms