RNA–Protein interactions for RNA: ENST00000282268.7

XRCC4-201, Transcript of X-ray repair cross complementing 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene XRCC4, Length 1,696 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC4-201ENST00000282268 LCORLQ8N3X6 602 aa13.63□□□□□ -0.23
XRCC4-201ENST00000282268 ZGPATQ8N5A5 531 aaKnown RBP13.63□□□□□ -0.23
XRCC4-201ENST00000282268 ZNF384Q8TF68 577 aa13.63□□□□□ -0.23
XRCC4-201ENST00000282268 NSUN4Q96CB9 384 aaKnown RBP13.63□□□□□ -0.23
XRCC4-201ENST00000282268 DDRGK1Q96HY6 314 aa13.63□□□□□ -0.23
XRCC4-201ENST00000282268 MAGEB6P1A0A0J9YX57 407 aa13.62□□□□□ -0.23
XRCC4-201ENST00000282268 SLC27A2O14975 620 aa13.62□□□□□ -0.23
XRCC4-201ENST00000282268 RASEFQ8IZ41 740 aa13.62□□□□□ -0.23
XRCC4-201ENST00000282268 LARGE2Q8N3Y3 721 aa13.62□□□□□ -0.23
XRCC4-201ENST00000282268 FHDC1Q9C0D6 1143 aaPredicted RBP13.62□□□□□ -0.23
XRCC4-201ENST00000282268 SNX14Q9Y5W7 946 aa13.62□□□□□ -0.23
XRCC4-201ENST00000282268 U3KPZ7 1027 aaPredicted RBP13.62□□□□□ -0.23
XRCC4-201ENST00000282268 MYH13Q9UKX3 1938 aa13.62□□□□□ -0.23
XRCC4-201ENST00000282268 KIAA1551Q9HCM1 1747 aa13.62□□□□□ -0.23
XRCC4-201ENST00000282268 PRKAB2O43741 272 aa13.61□□□□□ -0.23
XRCC4-201ENST00000282268 KIAA2012Q0VF49 1180 aa13.61□□□□□ -0.23
XRCC4-201ENST00000282268 DIXDC1Q155Q3 683 aa13.61□□□□□ -0.23
XRCC4-201ENST00000282268 SOGA3Q5TF21 947 aa13.61□□□□□ -0.23
XRCC4-201ENST00000282268 IPO9Q96P70 1041 aaKnown RBP13.61□□□□□ -0.23
XRCC4-201ENST00000282268 STRBPQ96SI9 672 aaKnown RBP13.61□□□□□ -0.23
XRCC4-201ENST00000282268 SLC4A4Q9Y6R1 1079 aa13.61□□□□□ -0.23
XRCC4-201ENST00000282268 NECTIN1Q15223 517 aa13.6□□□□□ -0.23
XRCC4-201ENST00000282268 DSCC1Q9BVC3 393 aa13.6□□□□□ -0.23
XRCC4-201ENST00000282268 AATFQ9NY61 560 aaKnown RBP eCLIP13.6□□□□□ -0.23
XRCC4-201ENST00000282268 DAXXQ9UER7 740 aaPredicted RBP13.6□□□□□ -0.23
XRCC4-201ENST00000282268 TAF6LQ9Y6J9 622 aa13.6□□□□□ -0.23
XRCC4-201ENST00000282268 FAM205AQ6ZU69 1335 aa13.6□□□□□ -0.23
XRCC4-201ENST00000282268 SALL1Q9NSC2 1324 aa13.6□□□□□ -0.23
XRCC4-201ENST00000282268 DOCK2Q92608 1830 aa13.6□□□□□ -0.23
XRCC4-201ENST00000282268 MYH7P12883 1935 aa13.6□□□□□ -0.23
XRCC4-201ENST00000282268 CPA1P15085 419 aa13.59□□□□□ -0.23
XRCC4-201ENST00000282268 ZKSCAN1P17029 563 aaPredicted RBP13.59□□□□□ -0.23
XRCC4-201ENST00000282268 HAND2P61296 217 aa13.59□□□□□ -0.23
XRCC4-201ENST00000282268 GRIPAP1Q4V328 841 aa13.59□□□□□ -0.23
XRCC4-201ENST00000282268 PODNQ7Z5L7 613 aa13.59□□□□□ -0.23
XRCC4-201ENST00000282268 TBC1D22AQ8WUA7 517 aa13.59□□□□□ -0.23
XRCC4-201ENST00000282268 PSMD1Q99460 953 aa13.59□□□□□ -0.23
XRCC4-201ENST00000282268 UPF3BQ9BZI7 483 aaKnown RBP13.59□□□□□ -0.23
XRCC4-201ENST00000282268 SNED1Q8TER0 1413 aa13.59□□□□□ -0.23
XRCC4-201ENST00000282268 FOXP2O15409 715 aa13.59□□□□□ -0.23
XRCC4-201ENST00000282268 EPB41L2O43491 1005 aaKnown RBP13.59□□□□□ -0.23
XRCC4-201ENST00000282268 SCNN1DP51172 638 aa13.59□□□□□ -0.23
XRCC4-201ENST00000282268 GSTO1P78417 241 aa13.59□□□□□ -0.23
XRCC4-201ENST00000282268 RASSF7Q02833 373 aa13.59□□□□□ -0.23
XRCC4-201ENST00000282268 RABEP1Q15276 862 aa13.59□□□□□ -0.23
XRCC4-201ENST00000282268 ADCK5Q3MIX3 580 aa13.59□□□□□ -0.23
XRCC4-201ENST00000282268 RNF20Q5VTR2 975 aa13.59□□□□□ -0.23
XRCC4-201ENST00000282268 NOL8Q76FK4 1167 aaKnown RBP13.59□□□□□ -0.23
XRCC4-201ENST00000282268 CERS5Q8N5B7 392 aa13.59□□□□□ -0.23
XRCC4-201ENST00000282268 JAKMIP1Q96N16 626 aaKnown RBP13.59□□□□□ -0.23
XRCC4-201ENST00000282268 USP17L3A6NCW0 530 aa13.58□□□□□ -0.24
XRCC4-201ENST00000282268 USP17L4A6NCW7 530 aa13.58□□□□□ -0.24
XRCC4-201ENST00000282268 YDJCA8MPS7 323 aa13.58□□□□□ -0.24
XRCC4-201ENST00000282268 PATL2C9JE40 543 aaKnown RBP13.58□□□□□ -0.24
XRCC4-201ENST00000282268 RAD17O75943 681 aa13.58□□□□□ -0.24
XRCC4-201ENST00000282268 FGAP02671 866 aa13.58□□□□□ -0.24
XRCC4-201ENST00000282268 IARSP41252 1262 aaKnown RBP13.58□□□□□ -0.24
XRCC4-201ENST00000282268 NEK4P51957 841 aa13.58□□□□□ -0.24
XRCC4-201ENST00000282268 USP17L1Q7RTZ2 530 aa13.58□□□□□ -0.24
XRCC4-201ENST00000282268 NIM1KQ8IY84 436 aa13.58□□□□□ -0.24
XRCC4-201ENST00000282268 SDR42E1Q8WUS8 393 aa13.58□□□□□ -0.24
XRCC4-201ENST00000282268 NOL10Q9BSC4 688 aaKnown RBP13.58□□□□□ -0.24
XRCC4-201ENST00000282268 TAOK3Q9H2K8 898 aa13.58□□□□□ -0.24
XRCC4-201ENST00000282268 NFKBIEO00221 500 aa13.57□□□□□ -0.24
XRCC4-201ENST00000282268 CYP21A2P08686 494 aa13.57□□□□□ -0.24
XRCC4-201ENST00000282268 CASTP20810 708 aaKnown RBP13.57□□□□□ -0.24
XRCC4-201ENST00000282268 TDO2P48775 406 aa13.57□□□□□ -0.24
XRCC4-201ENST00000282268 ANAPC15P60006 121 aa13.57□□□□□ -0.24
XRCC4-201ENST00000282268 BECN1Q14457 450 aa13.57□□□□□ -0.24
XRCC4-201ENST00000282268 HSCBQ8IWL3 235 aa13.57□□□□□ -0.24
XRCC4-201ENST00000282268 STK11IPQ8N1F8 1099 aa13.57□□□□□ -0.24
XRCC4-201ENST00000282268 SPRYD3Q8NCJ5 442 aa13.57□□□□□ -0.24
XRCC4-201ENST00000282268 TTF2Q9UNY4 1162 aaKnown RBP13.57□□□□□ -0.24
XRCC4-201ENST00000282268 GSG1L2A8MUP6 293 aa13.56□□□□□ -0.24
XRCC4-201ENST00000282268 ZBTB22O15209 634 aa13.56□□□□□ -0.24
XRCC4-201ENST00000282268 CD2BP2O95400 341 aaKnown RBP13.56□□□□□ -0.24
XRCC4-201ENST00000282268 LDHCP07864 332 aa13.56□□□□□ -0.24
XRCC4-201ENST00000282268 KIAA0825Q8IV33 1275 aa13.56□□□□□ -0.24
XRCC4-201ENST00000282268 IFNL3Q8IZI9 196 aa13.56□□□□□ -0.24
XRCC4-201ENST00000282268 RIOK1Q9BRS2 568 aaKnown RBP13.56□□□□□ -0.24
XRCC4-201ENST00000282268 TBC1D2Q9BYX2 928 aa13.56□□□□□ -0.24
XRCC4-201ENST00000282268 NAPBQ9H115 298 aa13.56□□□□□ -0.24
XRCC4-201ENST00000282268 EPB41L4AQ9HCS5 686 aaPredicted RBP13.56□□□□□ -0.24
XRCC4-201ENST00000282268 CTNNA3Q9UI47 895 aa13.56□□□□□ -0.24
XRCC4-201ENST00000282268 MROH7-TTC4A0A0A0MT08 1334 aa13.56□□□□□ -0.24
XRCC4-201ENST00000282268 GNAT2P19087 354 aa13.56□□□□□ -0.24
XRCC4-201ENST00000282268 BTDP43251 543 aa13.56□□□□□ -0.24
XRCC4-201ENST00000282268 IMMTQ16891 758 aaKnown RBP13.56□□□□□ -0.24
XRCC4-201ENST00000282268 DACT2Q5SW24 774 aa13.56□□□□□ -0.24
XRCC4-201ENST00000282268 STRIP1Q5VSL9 837 aa13.56□□□□□ -0.24
XRCC4-201ENST00000282268 ARHGAP27Q6ZUM4 889 aa13.56□□□□□ -0.24
XRCC4-201ENST00000282268 SH3RF3Q8TEJ3 882 aaPredicted RBP13.56□□□□□ -0.24
XRCC4-201ENST00000282268 NACAP1Q9BZK3 213 aa13.56□□□□□ -0.24
XRCC4-201ENST00000282268 CHD4Q14839 1912 aa13.55□□□□□ -0.24
XRCC4-201ENST00000282268 ZNF213O14771 459 aa13.55□□□□□ -0.24
XRCC4-201ENST00000282268 RBM5P52756 815 aaKnown RBP eCLIP13.55□□□□□ -0.24
XRCC4-201ENST00000282268 SLC4A8Q2Y0W8 1093 aa13.55□□□□□ -0.24
XRCC4-201ENST00000282268 SLF2Q8IX21 1173 aa13.55□□□□□ -0.24
XRCC4-201ENST00000282268 KCNB2Q92953 911 aa13.55□□□□□ -0.24
XRCC4-201ENST00000282268 LARP6Q9BRS8 491 aaKnown RBP13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms