RNA–Protein interactions for RNA: ENST00000272091.7

SDE2-201, Transcript of SDE2 telomere maintenance homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDE2, Length 3,975 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDE2-201ENST00000272091 ZSCAN31Q96LW9 406 aaPredicted RBP14.41□□□□□ -0.1
SDE2-201ENST00000272091 AGXT2Q9BYV1 514 aa14.41□□□□□ -0.1
SDE2-201ENST00000272091 ABCF2Q9UG63 623 aa14.41□□□□□ -0.1
SDE2-201ENST00000272091 GSG1L2A8MUP6 293 aa14.41□□□□□ -0.1
SDE2-201ENST00000272091 CTNNA3Q9UI47 895 aa14.41□□□□□ -0.1
SDE2-201ENST00000272091 ZMYM6O95789 1325 aa14.41□□□□□ -0.1
SDE2-201ENST00000272091 DHX32Q7L7V1 743 aaKnown RBP14.41□□□□□ -0.1
SDE2-201ENST00000272091 MIGA1Q8NAN2 632 aa14.41□□□□□ -0.1
SDE2-201ENST00000272091 SH2B1Q9NRF2 756 aaPredicted RBP14.41□□□□□ -0.1
SDE2-201ENST00000272091 BBOX1O75936 387 aa14.41□□□□□ -0.1
SDE2-201ENST00000272091 NUCB2P80303 420 aa14.41□□□□□ -0.1
SDE2-201ENST00000272091 ALX1Q15699 326 aa14.41□□□□□ -0.1
SDE2-201ENST00000272091 RIOK1Q9BRS2 568 aaKnown RBP14.41□□□□□ -0.1
SDE2-201ENST00000272091 PODXL2Q9NZ53 605 aa14.41□□□□□ -0.1
SDE2-201ENST00000272091 POLLQ9UGP5 575 aa14.41□□□□□ -0.1
SDE2-201ENST00000272091 CYP7A1P22680 504 aa14.4□□□□□ -0.1
SDE2-201ENST00000272091 IMMTQ16891 758 aaKnown RBP14.4□□□□□ -0.1
SDE2-201ENST00000272091 MB21D2Q8IYB1 491 aaPredicted RBP14.4□□□□□ -0.1
SDE2-201ENST00000272091 JAG2Q9Y219 1238 aa14.4□□□□□ -0.1
SDE2-201ENST00000272091 BRD1O95696 1058 aa14.4□□□□□ -0.1
SDE2-201ENST00000272091 TDRD7Q8NHU6 1098 aaKnown RBP14.4□□□□□ -0.1
SDE2-201ENST00000272091 NSUN4Q96CB9 384 aaKnown RBP14.4□□□□□ -0.1
SDE2-201ENST00000272091 PDGFDQ9GZP0 370 aaPredicted RBP14.4□□□□□ -0.1
SDE2-201ENST00000272091 PATL2C9JE40 543 aaKnown RBP14.4□□□□□ -0.1
SDE2-201ENST00000272091 ANTXR2P58335 489 aa14.4□□□□□ -0.1
SDE2-201ENST00000272091 CHST3Q7LGC8 479 aa14.4□□□□□ -0.1
SDE2-201ENST00000272091 IFNL3Q8IZI9 196 aa14.4□□□□□ -0.1
SDE2-201ENST00000272091 RAI14Q9P0K7 980 aa14.4□□□□□ -0.1
SDE2-201ENST00000272091 BAZ2AQ9UIF9 1905 aaKnown RBP14.4□□□□□ -0.1
SDE2-201ENST00000272091 PRDX5P30044 214 aa14.39□□□□□ -0.11
SDE2-201ENST00000272091 ANKRD1Q15327 319 aa14.39□□□□□ -0.11
SDE2-201ENST00000272091 OLFM4Q6UX06 510 aa14.39□□□□□ -0.11
SDE2-201ENST00000272091 CHAMP1Q96JM3 812 aa14.39□□□□□ -0.11
SDE2-201ENST00000272091 PARP3Q9Y6F1 533 aa14.39□□□□□ -0.11
SDE2-201ENST00000272091 PPEF1O14829 653 aaPredicted RBP14.39□□□□□ -0.11
SDE2-201ENST00000272091 HMGB1P09429 215 aaKnown RBP14.39□□□□□ -0.11
SDE2-201ENST00000272091 NSFL1CQ9UNZ2 370 aaKnown RBP14.39□□□□□ -0.11
SDE2-201ENST00000272091 LAMB1P07942 1786 aa14.39□□□□□ -0.11
SDE2-201ENST00000272091 UFL1O94874 794 aa14.39□□□□□ -0.11
SDE2-201ENST00000272091 MECOMQ03112 1051 aa14.39□□□□□ -0.11
SDE2-201ENST00000272091 DEFB132Q7Z7B7 95 aa14.39□□□□□ -0.11
SDE2-201ENST00000272091 GPHNQ9NQX3 736 aaPredicted RBP14.39□□□□□ -0.11
SDE2-201ENST00000272091 CHAF1AQ13111 956 aaPredicted RBP14.38□□□□□ -0.11
SDE2-201ENST00000272091 GRIK5Q16478 980 aa14.38□□□□□ -0.11
SDE2-201ENST00000272091 TBC1D16Q8TBP0 767 aa14.38□□□□□ -0.11
SDE2-201ENST00000272091 BRF1Q92994 677 aa14.38□□□□□ -0.11
SDE2-201ENST00000272091 ZNF213O14771 459 aa14.38□□□□□ -0.11
SDE2-201ENST00000272091 BAG4O95429 457 aaKnown RBP14.38□□□□□ -0.11
SDE2-201ENST00000272091 ATP2B4P23634 1241 aa14.38□□□□□ -0.11
SDE2-201ENST00000272091 DYNLL1P63167 89 aaKnown RBP14.38□□□□□ -0.11
SDE2-201ENST00000272091 CDK5RAP2Q96SN8 1893 aa14.38□□□□□ -0.11
SDE2-201ENST00000272091 ZNF646O15015 1829 aaPredicted RBP14.38□□□□□ -0.11
SDE2-201ENST00000272091 SLX4Q8IY92 1834 aa14.38□□□□□ -0.11
SDE2-201ENST00000272091 SALL1Q9NSC2 1324 aa14.38□□□□□ -0.11
SDE2-201ENST00000272091 SP8Q8IXZ3 490 aa14.38□□□□□ -0.11
SDE2-201ENST00000272091 INCENPQ9NQS7 918 aa14.38□□□□□ -0.11
SDE2-201ENST00000272091 GGA1Q9UJY5 639 aa14.38□□□□□ -0.11
SDE2-201ENST00000272091 NEDD4P46934 1319 aa14.37□□□□□ -0.11
SDE2-201ENST00000272091 NPR1P16066 1061 aa14.37□□□□□ -0.11
SDE2-201ENST00000272091 FBXL16Q8N461 479 aa14.37□□□□□ -0.11
SDE2-201ENST00000272091 ATP6V0A2Q9Y487 856 aa14.37□□□□□ -0.11
SDE2-201ENST00000272091 SLC4A4Q9Y6R1 1079 aa14.37□□□□□ -0.11
SDE2-201ENST00000272091 DLEC1Q9Y238 1755 aa14.37□□□□□ -0.11
SDE2-201ENST00000272091 APPP05067 770 aa14.37□□□□□ -0.11
SDE2-201ENST00000272091 APOBRQ0VD83 1088 aa14.37□□□□□ -0.11
SDE2-201ENST00000272091 STK3Q13188 491 aa14.37□□□□□ -0.11
SDE2-201ENST00000272091 GTF3C6Q969F1 213 aa14.37□□□□□ -0.11
SDE2-201ENST00000272091 STK32BQ9NY57 414 aa14.37□□□□□ -0.11
SDE2-201ENST00000272091 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.37□□□□□ -0.11
SDE2-201ENST00000272091 MAGEB6P1A0A0J9YX57 407 aa14.36□□□□□ -0.11
SDE2-201ENST00000272091 SMIM22K7EJ46 135 aa14.36□□□□□ -0.11
SDE2-201ENST00000272091 IL1R1P14778 569 aa14.36□□□□□ -0.11
SDE2-201ENST00000272091 GJB2P29033 226 aa14.36□□□□□ -0.11
SDE2-201ENST00000272091 FOXD4L5Q5VV16 416 aaPredicted RBP14.36□□□□□ -0.11
SDE2-201ENST00000272091 NAA16Q6N069 864 aaPredicted RBP14.36□□□□□ -0.11
SDE2-201ENST00000272091 CYB5R4Q7L1T6 521 aa14.36□□□□□ -0.11
SDE2-201ENST00000272091 SDR42E1Q8WUS8 393 aa14.36□□□□□ -0.11
SDE2-201ENST00000272091 FOXD4L4Q8WXT5 416 aaPredicted RBP14.36□□□□□ -0.11
SDE2-201ENST00000272091 CD209Q9NNX6 404 aa14.36□□□□□ -0.11
SDE2-201ENST00000272091 PDE6BP35913 854 aa14.36□□□□□ -0.11
SDE2-201ENST00000272091 CTDSPL2Q05D32 466 aa14.36□□□□□ -0.11
SDE2-201ENST00000272091 ZNF804AQ7Z570 1209 aa14.36□□□□□ -0.11
SDE2-201ENST00000272091 MYH2Q9UKX2 1941 aa14.36□□□□□ -0.11
SDE2-201ENST00000272091 GNAT2P19087 354 aa14.35□□□□□ -0.11
SDE2-201ENST00000272091 SCRN1Q12765 414 aa14.35□□□□□ -0.11
SDE2-201ENST00000272091 SMC3Q9UQE7 1217 aa14.35□□□□□ -0.11
SDE2-201ENST00000272091 TMC4Q7Z404 712 aa14.35□□□□□ -0.11
SDE2-201ENST00000272091 SYT1P21579 422 aa14.35□□□□□ -0.11
SDE2-201ENST00000272091 DEKP35659 375 aaKnown RBP14.35□□□□□ -0.11
SDE2-201ENST00000272091 EVCP57679 992 aa14.35□□□□□ -0.11
SDE2-201ENST00000272091 NCOA7Q8NI08 942 aa14.35□□□□□ -0.11
SDE2-201ENST00000272091 MASTLQ96GX5 879 aa14.35□□□□□ -0.11
SDE2-201ENST00000272091 GBP4Q96PP9 640 aa14.35□□□□□ -0.11
SDE2-201ENST00000272091 PRC1O43663 620 aa14.34□□□□□ -0.11
SDE2-201ENST00000272091 PFKFB2O60825 505 aa14.34□□□□□ -0.11
SDE2-201ENST00000272091 NAPBQ9H115 298 aa14.34□□□□□ -0.11
SDE2-201ENST00000272091 WDR19Q8NEZ3 1342 aa14.34□□□□□ -0.11
SDE2-201ENST00000272091 CTDNEP1O95476 244 aa14.34□□□□□ -0.11
SDE2-201ENST00000272091 DDX60LQ5H9U9 1706 aaKnown RBP14.34□□□□□ -0.11
SDE2-201ENST00000272091 SNED1Q8TER0 1413 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms