RNA–Protein interactions for RNA: ENST00000271850.11

TPM3-201, Transcript of tropomyosin 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene TPM3, Length 1,219 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-201ENST00000271850 CENPFP49454 3210 aa11.44□□□□□ -0.58
TPM3-201ENST00000271850 MKI67P46013 3256 aaKnown RBP11.43□□□□□ -0.58
TPM3-201ENST00000271850 MYO3BQ8WXR4 1341 aa11.43□□□□□ -0.58
TPM3-201ENST00000271850 MLLT1Q03111 559 aaPredicted RBP11.43□□□□□ -0.58
TPM3-201ENST00000271850 PTPN12Q05209 780 aaKnown RBP11.43□□□□□ -0.58
TPM3-201ENST00000271850 VARS2Q5ST30 1063 aaKnown RBP11.43□□□□□ -0.58
TPM3-201ENST00000271850 C15orf52Q6ZUT6 534 aaKnown RBP11.43□□□□□ -0.58
TPM3-201ENST00000271850 ANKRD2Q9GZV1 360 aa11.43□□□□□ -0.58
TPM3-201ENST00000271850 JAG2Q9Y219 1238 aa11.43□□□□□ -0.58
TPM3-201ENST00000271850 ZNF521Q96K83 1311 aa11.42□□□□□ -0.58
TPM3-201ENST00000271850 TBC1D8O95759 1140 aa11.42□□□□□ -0.58
TPM3-201ENST00000271850 IL1R1P14778 569 aa11.42□□□□□ -0.58
TPM3-201ENST00000271850 LDLRAD1Q5T700 205 aa11.42□□□□□ -0.58
TPM3-201ENST00000271850 MPHOSPH8Q99549 860 aa11.42□□□□□ -0.58
TPM3-201ENST00000271850 MYH16Q9H6N6 1097 aa11.42□□□□□ -0.58
TPM3-201ENST00000271850 ZSWIM6Q9HCJ5 1215 aa11.42□□□□□ -0.58
TPM3-201ENST00000271850 ECM29Q5VYK3 1845 aa11.42□□□□□ -0.58
TPM3-201ENST00000271850 LAMB1P07942 1786 aa11.41□□□□□ -0.58
TPM3-201ENST00000271850 ANKRD18BA2A2Z9 1011 aa11.41□□□□□ -0.58
TPM3-201ENST00000271850 TM4SF4P48230 202 aa11.41□□□□□ -0.58
TPM3-201ENST00000271850 SOX10P56693 466 aa11.41□□□□□ -0.58
TPM3-201ENST00000271850 PRKG1Q13976 671 aa11.41□□□□□ -0.58
TPM3-201ENST00000271850 LMBR1LQ6UX01 489 aa11.41□□□□□ -0.58
TPM3-201ENST00000271850 MTMR14Q8NCE2 650 aa11.41□□□□□ -0.58
TPM3-201ENST00000271850 ZNF296Q8WUU4 475 aaPredicted RBP11.41□□□□□ -0.58
TPM3-201ENST00000271850 SLC34A2O95436 690 aa11.4□□□□□ -0.58
TPM3-201ENST00000271850 GRIK5Q16478 980 aa11.4□□□□□ -0.58
TPM3-201ENST00000271850 CTU1Q7Z7A3 348 aaKnown RBP11.4□□□□□ -0.58
TPM3-201ENST00000271850 OGFOD1Q8N543 542 aa11.4□□□□□ -0.58
TPM3-201ENST00000271850 SUCLG2Q96I99 432 aa11.4□□□□□ -0.58
TPM3-201ENST00000271850 CLMNQ96JQ2 1002 aa11.4□□□□□ -0.58
TPM3-201ENST00000271850 PUS3Q9BZE2 481 aaKnown RBP11.4□□□□□ -0.58
TPM3-201ENST00000271850 PDE4DIPQ5VU43 2346 aa11.4□□□□□ -0.59
TPM3-201ENST00000271850 OTOFQ9HC10 1997 aa11.39□□□□□ -0.59
TPM3-201ENST00000271850 COL1A1P02452 1464 aaPredicted RBP11.39□□□□□ -0.59
TPM3-201ENST00000271850 CLRN2A0PK11 232 aa11.39□□□□□ -0.59
TPM3-201ENST00000271850 F8W031 263 aaPredicted RBP11.39□□□□□ -0.59
TPM3-201ENST00000271850 GRM8O00222 908 aa11.39□□□□□ -0.59
TPM3-201ENST00000271850 GJA5P36382 358 aa11.39□□□□□ -0.59
TPM3-201ENST00000271850 CAP1Q01518 475 aa11.39□□□□□ -0.59
TPM3-201ENST00000271850 IFIT5Q13325 482 aaKnown RBP11.39□□□□□ -0.59
TPM3-201ENST00000271850 MAP3K11Q16584 847 aa11.39□□□□□ -0.59
TPM3-201ENST00000271850 APOBEC3FQ8IUX4 373 aaKnown RBP11.39□□□□□ -0.59
TPM3-201ENST00000271850 ARAP2Q8WZ64 1704 aa11.39□□□□□ -0.59
TPM3-201ENST00000271850 PRMT6Q96LA8 375 aaPredicted RBP11.39□□□□□ -0.59
TPM3-201ENST00000271850 DEFB129Q9H1M3 183 aa11.39□□□□□ -0.59
TPM3-201ENST00000271850 HPS5Q9UPZ3 1129 aa11.39□□□□□ -0.59
TPM3-201ENST00000271850 GPR25O00155 361 aa11.38□□□□□ -0.59
TPM3-201ENST00000271850 NBPF7P0C2Y1 421 aaPredicted RBP11.38□□□□□ -0.59
TPM3-201ENST00000271850 KCNJ4P48050 445 aa11.38□□□□□ -0.59
TPM3-201ENST00000271850 MMP14P50281 582 aa11.38□□□□□ -0.59
TPM3-201ENST00000271850 TTLL12Q14166 644 aaPredicted RBP11.38□□□□□ -0.59
TPM3-201ENST00000271850 CFAP100Q494V2 611 aa11.38□□□□□ -0.59
TPM3-201ENST00000271850 SPRYD7Q5W111 196 aa11.38□□□□□ -0.59
TPM3-201ENST00000271850 EFCAB3Q8N7B9 438 aa11.38□□□□□ -0.59
TPM3-201ENST00000271850 CFHR5Q9BXR6 569 aa11.38□□□□□ -0.59
TPM3-201ENST00000271850 ANGEL1Q9UNK9 670 aaKnown RBP11.38□□□□□ -0.59
TPM3-201ENST00000271850 CHMP3Q9Y3E7 222 aa11.38□□□□□ -0.59
TPM3-201ENST00000271850 UTYO14607 1347 aa11.37□□□□□ -0.59
TPM3-201ENST00000271850 FAM205AQ6ZU69 1335 aa11.37□□□□□ -0.59
TPM3-201ENST00000271850 IGF2BP3O00425 579 aaKnown RBP eCLIP11.37□□□□□ -0.591e-7■■■■□ 23.3
TPM3-201ENST00000271850 GYG1P46976 350 aa11.37□□□□□ -0.59
TPM3-201ENST00000271850 FKBP1AP62942 108 aaKnown RBP11.37□□□□□ -0.59
TPM3-201ENST00000271850 DLGAP5Q15398 846 aa11.37□□□□□ -0.59
TPM3-201ENST00000271850 NBPF12Q5TAG4 269 aaPredicted RBP11.37□□□□□ -0.59
TPM3-201ENST00000271850 IFNLR1Q8IU57 520 aaPredicted RBP11.37□□□□□ -0.59
TPM3-201ENST00000271850 ANKRD44Q8N8A2 993 aa11.37□□□□□ -0.59
TPM3-201ENST00000271850 TDRD7Q8NHU6 1098 aaKnown RBP11.37□□□□□ -0.59
TPM3-201ENST00000271850 HDAC9Q9UKV0 1011 aa11.37□□□□□ -0.59
TPM3-201ENST00000271850 PLIN1O60240 522 aa11.36□□□□□ -0.59
TPM3-201ENST00000271850 ALDH1L1O75891 902 aa11.36□□□□□ -0.59
TPM3-201ENST00000271850 RABL6Q3YEC7 729 aaPredicted RBP11.36□□□□□ -0.59
TPM3-201ENST00000271850 LRRC24Q50LG9 513 aa11.36□□□□□ -0.59
TPM3-201ENST00000271850 NOM1Q5C9Z4 860 aaKnown RBP11.36□□□□□ -0.59
TPM3-201ENST00000271850 LDHAL6AQ6ZMR3 332 aa11.36□□□□□ -0.59
TPM3-201ENST00000271850 ARMC9Q7Z3E5 817 aa11.36□□□□□ -0.59
TPM3-201ENST00000271850 ZNF687Q8N1G0 1237 aa11.36□□□□□ -0.59
TPM3-201ENST00000271850 MRPL50Q8N5N7 158 aaKnown RBP11.36□□□□□ -0.59
TPM3-201ENST00000271850 VGLL2Q8N8G2 317 aa11.36□□□□□ -0.59
TPM3-201ENST00000271850 FAM84BQ96KN1 310 aaPredicted RBP11.36□□□□□ -0.59
TPM3-201ENST00000271850 TEPSINQ96N21 525 aa11.36□□□□□ -0.59
TPM3-201ENST00000271850 RIPOR2Q9Y4F9 1068 aa11.36□□□□□ -0.59
TPM3-201ENST00000271850 ZNF316A6NFI3 1004 aaPredicted RBP11.35□□□□□ -0.59
TPM3-201ENST00000271850 ANP32CO43423 234 aa11.35□□□□□ -0.59
TPM3-201ENST00000271850 USP2O75604 605 aaPredicted RBP11.35□□□□□ -0.59
TPM3-201ENST00000271850 CCDC57Q2TAC2 916 aa11.35□□□□□ -0.59
TPM3-201ENST00000271850 SLC4A10Q6U841 1118 aa11.35□□□□□ -0.59
TPM3-201ENST00000271850 ZNF804AQ7Z570 1209 aa11.35□□□□□ -0.59
TPM3-201ENST00000271850 FAM9BQ8IZU0 186 aa11.35□□□□□ -0.59
TPM3-201ENST00000271850 WNK4Q96J92 1243 aa11.35□□□□□ -0.59
TPM3-201ENST00000271850 PTPN18Q99952 460 aa11.35□□□□□ -0.59
TPM3-201ENST00000271850 BICC1Q9H694 974 aaKnown RBP11.35□□□□□ -0.59
TPM3-201ENST00000271850 NF2P35240 595 aa11.34□□□□□ -0.59
TPM3-201ENST00000271850 UBE4AQ14139 1066 aa11.34□□□□□ -0.59
TPM3-201ENST00000271850 RASA3Q14644 834 aa11.34□□□□□ -0.59
TPM3-201ENST00000271850 MFSD14BQ5SR56 506 aa11.34□□□□□ -0.59
TPM3-201ENST00000271850 FBXO33Q7Z6M2 555 aa11.34□□□□□ -0.59
TPM3-201ENST00000271850 KLHDC4Q8TBB5 520 aa11.34□□□□□ -0.59
TPM3-201ENST00000271850 SRCIN1Q9C0H9 1055 aa11.34□□□□□ -0.59
TPM3-201ENST00000271850 VEZTQ9HBM0 779 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 94.2 ms