RNA–Protein interactions for RNA: ENST00000269361.11

CSNK1D-201, Transcript of casein kinase 1 delta, humanhuman

TSL 5

Gene CSNK1D, Length 1,088 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-201ENST00000269361 ZBTB48P10074 688 aaPredicted RBP21.9■■□□□ 1.1
CSNK1D-201ENST00000269361 FGFR2P21802 821 aa21.9■■□□□ 1.1
CSNK1D-201ENST00000269361 IREB2P48200 963 aaKnown RBP21.9■■□□□ 1.1
CSNK1D-201ENST00000269361 INHBEP58166 350 aa21.9■■□□□ 1.1
CSNK1D-201ENST00000269361 NOM1Q5C9Z4 860 aaKnown RBP21.9■■□□□ 1.1
CSNK1D-201ENST00000269361 WNK4Q96J92 1243 aa21.9■■□□□ 1.1
CSNK1D-201ENST00000269361 KIF16BQ96L93 1317 aa21.89■■□□□ 1.1
CSNK1D-201ENST00000269361 GPR25O00155 361 aa21.89■■□□□ 1.09
CSNK1D-201ENST00000269361 UBTFL1P0CB47 393 aaPredicted RBP21.89■■□□□ 1.09
CSNK1D-201ENST00000269361 HDLBPQ00341 1268 aaKnown RBP21.89■■□□□ 1.09
CSNK1D-201ENST00000269361 CFHR5Q9BXR6 569 aa21.89■■□□□ 1.09
CSNK1D-201ENST00000269361 AKAP11Q9UKA4 1901 aa21.88■■□□□ 1.09
CSNK1D-201ENST00000269361 TCP10L2B9ZVM9 353 aa21.88■■□□□ 1.09
CSNK1D-201ENST00000269361 ALDH1A1P00352 501 aa21.88■■□□□ 1.09
CSNK1D-201ENST00000269361 TEPSINQ96N21 525 aa21.88■■□□□ 1.09
CSNK1D-201ENST00000269361 API5Q9BZZ5 524 aaKnown RBP21.88■■□□□ 1.09
CSNK1D-201ENST00000269361 R3HDMLQ9H3Y0 253 aa21.88■■□□□ 1.09
CSNK1D-201ENST00000269361 TNNI2P48788 182 aa21.87■■□□□ 1.09
CSNK1D-201ENST00000269361 PKN2Q16513 984 aaKnown RBP21.87■■□□□ 1.09
CSNK1D-201ENST00000269361 ATG9AQ7Z3C6 839 aa21.87■■□□□ 1.09
CSNK1D-201ENST00000269361 IFNL1Q8IU54 200 aa21.87■■□□□ 1.09
CSNK1D-201ENST00000269361 ANKRD13AQ8IZ07 590 aa21.87■■□□□ 1.09
CSNK1D-201ENST00000269361 LPIN2Q92539 896 aa21.87■■□□□ 1.09
CSNK1D-201ENST00000269361 TEKT1Q969V4 418 aa21.87■■□□□ 1.09
CSNK1D-201ENST00000269361 MRIQ9BWK5 157 aa21.87■■□□□ 1.09
CSNK1D-201ENST00000269361 SLC5A1P13866 664 aa21.86■■□□□ 1.09
CSNK1D-201ENST00000269361 CDAN1Q8IWY9 1227 aa21.86■■□□□ 1.09
CSNK1D-201ENST00000269361 TMEM39BQ9GZU3 492 aa21.86■■□□□ 1.09
CSNK1D-201ENST00000269361 SUGT1Q9Y2Z0 365 aa21.86■■□□□ 1.09
CSNK1D-201ENST00000269361 FKTNO75072 461 aa21.85■■□□□ 1.09
CSNK1D-201ENST00000269361 ZDHHC15Q96MV8 337 aa21.85■■□□□ 1.09
CSNK1D-201ENST00000269361 FBXO3Q9UK99 471 aa21.85■■□□□ 1.09
CSNK1D-201ENST00000269361 HDAC5Q9UQL6 1122 aa21.85■■□□□ 1.09
CSNK1D-201ENST00000269361 CIAO1O76071 339 aa21.84■■□□□ 1.09
CSNK1D-201ENST00000269361 GJA5P36382 358 aa21.84■■□□□ 1.09
CSNK1D-201ENST00000269361 RARSP54136 660 aaKnown RBP21.84■■□□□ 1.09
CSNK1D-201ENST00000269361 SIL1Q9H173 461 aa21.84■■□□□ 1.09
CSNK1D-201ENST00000269361 HPS5Q9UPZ3 1129 aa21.84■■□□□ 1.09
CSNK1D-201ENST00000269361 IGF2BP3O00425 579 aaKnown RBP eCLIP21.83■■□□□ 1.09
CSNK1D-201ENST00000269361 CACNB3P54284 484 aa21.83■■□□□ 1.09
CSNK1D-201ENST00000269361 APOBEC3HQ6NTF7 200 aaKnown RBP21.83■■□□□ 1.09
CSNK1D-201ENST00000269361 WDR66Q8TBY9 1149 aa21.83■■□□□ 1.09
CSNK1D-201ENST00000269361 ELP3Q9H9T3 547 aa21.83■■□□□ 1.09
CSNK1D-201ENST00000269361 CEP126Q9P2H0 1117 aa21.83■■□□□ 1.09
CSNK1D-201ENST00000269361 LRRFIP2Q9Y608 721 aaKnown RBP21.83■■□□□ 1.09
CSNK1D-201ENST00000269361 MAST3O60307 1309 aa21.82■■□□□ 1.08
CSNK1D-201ENST00000269361 PPP1R3FQ6ZSY5 799 aaPredicted RBP21.82■■□□□ 1.08
CSNK1D-201ENST00000269361 ECM29Q5VYK3 1845 aa21.81■■□□□ 1.08
CSNK1D-201ENST00000269361 SOX10P56693 466 aa21.81■■□□□ 1.08
CSNK1D-201ENST00000269361 MAP3K9P80192 1104 aa21.81■■□□□ 1.08
CSNK1D-201ENST00000269361 ATP2B3Q16720 1220 aa21.81■■□□□ 1.08
CSNK1D-201ENST00000269361 OTUD7BQ6GQQ9 843 aa21.81■■□□□ 1.08
CSNK1D-201ENST00000269361 HHIPL2Q6UWX4 724 aa21.81■■□□□ 1.08
CSNK1D-201ENST00000269361 ARHGAP45Q92619 1136 aa21.81■■□□□ 1.08
CSNK1D-201ENST00000269361 OPTNQ96CV9 577 aa21.81■■□□□ 1.08
CSNK1D-201ENST00000269361 TMOD2Q9NZR1 351 aa21.81■■□□□ 1.08
CSNK1D-201ENST00000269361 TESPA1A2RU30 521 aaPredicted RBP21.8■■□□□ 1.08
CSNK1D-201ENST00000269361 IL15P40933 162 aaPredicted RBP21.8■■□□□ 1.08
CSNK1D-201ENST00000269361 FKBP1CQ5VVH2 108 aa21.8■■□□□ 1.08
CSNK1D-201ENST00000269361 MEIS3Q99687 375 aa21.8■■□□□ 1.08
CSNK1D-201ENST00000269361 VGLL4Q14135 290 aa21.79■■□□□ 1.08
CSNK1D-201ENST00000269361 INTS3Q68E01 1043 aaKnown RBP21.79■■□□□ 1.08
CSNK1D-201ENST00000269361 FAM83AQ86UY5 434 aa21.79■■□□□ 1.08
CSNK1D-201ENST00000269361 DDX55Q8NHQ9 600 aaKnown RBP eCLIP21.79■■□□□ 1.08
CSNK1D-201ENST00000269361 PTPN18Q99952 460 aa21.79■■□□□ 1.08
CSNK1D-201ENST00000269361 COPRSQ9NQ92 184 aa21.79■■□□□ 1.08
CSNK1D-201ENST00000269361 GNL3LQ9NVN8 582 aaKnown RBP21.79■■□□□ 1.08
CSNK1D-201ENST00000269361 PA2G4Q9UQ80 394 aaKnown RBP21.79■■□□□ 1.08
CSNK1D-201ENST00000269361 ARAP2Q8WZ64 1704 aa21.78■■□□□ 1.08
CSNK1D-201ENST00000269361 FBXO46Q6PJ61 603 aaPredicted RBP21.78■■□□□ 1.08
CSNK1D-201ENST00000269361 CSADQ9Y600 493 aa21.78■■□□□ 1.08
CSNK1D-201ENST00000269361 CNKSR2Q8WXI2 1034 aa21.77■■□□□ 1.08
CSNK1D-201ENST00000269361 MS4A4AQ96JQ5 239 aa21.77■■□□□ 1.08
CSNK1D-201ENST00000269361 GNAI3P08754 354 aa21.76■■□□□ 1.07
CSNK1D-201ENST00000269361 CRHR2Q13324 411 aa21.76■■□□□ 1.07
CSNK1D-201ENST00000269361 HOOK2Q96ED9 719 aa21.76■■□□□ 1.07
CSNK1D-201ENST00000269361 SEMA3EO15041 775 aa21.75■■□□□ 1.07
CSNK1D-201ENST00000269361 DENND2AQ9ULE3 1009 aa21.75■■□□□ 1.07
CSNK1D-201ENST00000269361 DAGLAQ9Y4D2 1042 aa21.75■■□□□ 1.07
CSNK1D-201ENST00000269361 IPO8O15397 1037 aaKnown RBP21.74■■□□□ 1.07
CSNK1D-201ENST00000269361 LDHBP07195 334 aaKnown RBP21.74■■□□□ 1.07
CSNK1D-201ENST00000269361 PRDX5P30044 214 aa21.74■■□□□ 1.07
CSNK1D-201ENST00000269361 PHKA1P46020 1223 aa21.74■■□□□ 1.07
CSNK1D-201ENST00000269361 GTF2A2P52657 109 aa21.74■■□□□ 1.07
CSNK1D-201ENST00000269361 DIXDC1Q155Q3 683 aa21.74■■□□□ 1.07
CSNK1D-201ENST00000269361 BRI3BPQ8WY22 251 aa21.74■■□□□ 1.07
CSNK1D-201ENST00000269361 OTUD5Q96G74 571 aa21.74■■□□□ 1.07
CSNK1D-201ENST00000269361 SPDYE5A6NIY4 337 aa21.73■■□□□ 1.07
CSNK1D-201ENST00000269361 SRGAP3O43295 1099 aa21.73■■□□□ 1.07
CSNK1D-201ENST00000269361 ADORA1P30542 326 aa21.73■■□□□ 1.07
CSNK1D-201ENST00000269361 CDC42EP5Q6NZY7 148 aa21.73■■□□□ 1.07
CSNK1D-201ENST00000269361 FAM151AQ8WW52 585 aa21.73■■□□□ 1.07
CSNK1D-201ENST00000269361 WRNIP1Q96S55 665 aa21.73■■□□□ 1.07
CSNK1D-201ENST00000269361 TRIM17Q9Y577 477 aa21.73■■□□□ 1.07
CSNK1D-201ENST00000269361 SALL1Q9NSC2 1324 aa21.73■■□□□ 1.07
CSNK1D-201ENST00000269361 CCL15-CCL14A0A0B4J2E2 113 aa21.72■■□□□ 1.07
CSNK1D-201ENST00000269361 ZBTB22O15209 634 aa21.72■■□□□ 1.07
CSNK1D-201ENST00000269361 TIMM10P62072 90 aa21.72■■□□□ 1.07
CSNK1D-201ENST00000269361 MTX1Q13505 466 aa21.72■■□□□ 1.07
CSNK1D-201ENST00000269361 CCL15Q16663 113 aa21.72■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms