RNA–Protein interactions for RNA: ENST00000269138.9

SS18-202, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 2

Gene SS18, Length 1,548 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-202ENST00000269138 AOX1Q06278 1338 aa15.58■□□□□ 0.09
SS18-202ENST00000269138 CRKP46108 304 aa15.58■□□□□ 0.08
SS18-202ENST00000269138 DIXDC1Q155Q3 683 aa15.58■□□□□ 0.08
SS18-202ENST00000269138 MAP1SQ66K74 1059 aaPredicted RBP15.58■□□□□ 0.08
SS18-202ENST00000269138 CHD1LQ86WJ1 897 aa15.58■□□□□ 0.08
SS18-202ENST00000269138 EDC3Q96F86 508 aaKnown RBP15.58■□□□□ 0.08
SS18-202ENST00000269138 ECHDC1Q9NTX5 307 aa15.58■□□□□ 0.08
SS18-202ENST00000269138 WNT10BO00744 389 aa15.57■□□□□ 0.08
SS18-202ENST00000269138 MMP14P50281 582 aa15.57■□□□□ 0.08
SS18-202ENST00000269138 RBM5P52756 815 aaKnown RBP eCLIP15.57■□□□□ 0.08
SS18-202ENST00000269138 DLGAP5Q15398 846 aa15.57■□□□□ 0.08
SS18-202ENST00000269138 CHADLQ6NUI6 762 aa15.57■□□□□ 0.08
SS18-202ENST00000269138 ERICH6Q7L0X2 663 aa15.57■□□□□ 0.08
SS18-202ENST00000269138 ZGPATQ8N5A5 531 aaKnown RBP15.57■□□□□ 0.08
SS18-202ENST00000269138 RBM46Q8TBY0 533 aaKnown RBP15.57■□□□□ 0.08
SS18-202ENST00000269138 ZNF384Q8TF68 577 aa15.57■□□□□ 0.08
SS18-202ENST00000269138 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.57■□□□□ 0.08
SS18-202ENST00000269138 PRMT6Q96LA8 375 aaPredicted RBP15.57■□□□□ 0.08
SS18-202ENST00000269138 DNAJC2Q99543 621 aaKnown RBP15.57■□□□□ 0.08
SS18-202ENST00000269138 SERPINA10Q9UK55 444 aa15.57■□□□□ 0.08
SS18-202ENST00000269138 SALL3Q9BXA9 1300 aa15.57■□□□□ 0.08
SS18-202ENST00000269138 AKAP11Q9UKA4 1901 aa15.57■□□□□ 0.08
SS18-202ENST00000269138 MYH13Q9UKX3 1938 aa15.57■□□□□ 0.08
SS18-202ENST00000269138 MECOMQ03112 1051 aa15.56■□□□□ 0.08
SS18-202ENST00000269138 SPTY2D1Q68D10 685 aaPredicted RBP15.56■□□□□ 0.08
SS18-202ENST00000269138 MTMR14Q8NCE2 650 aa15.56■□□□□ 0.08
SS18-202ENST00000269138 RAI14Q9P0K7 980 aa15.56■□□□□ 0.08
SS18-202ENST00000269138 LRP2BPQ9P2M1 347 aa15.56■□□□□ 0.08
SS18-202ENST00000269138 PGAP2Q9UHJ9 254 aa15.56■□□□□ 0.08
SS18-202ENST00000269138 SCAF8Q9UPN6 1271 aaKnown RBP15.56■□□□□ 0.08
SS18-202ENST00000269138 SPDYE2BA6NHP3 402 aa15.55■□□□□ 0.08
SS18-202ENST00000269138 GOLIM4O00461 696 aa15.55■□□□□ 0.08
SS18-202ENST00000269138 SPDYE6P0CI01 402 aa15.55■□□□□ 0.08
SS18-202ENST00000269138 MX1P20591 662 aa15.55■□□□□ 0.08
SS18-202ENST00000269138 HDLBPQ00341 1268 aaKnown RBP15.55■□□□□ 0.08
SS18-202ENST00000269138 DZIP1Q86YF9 867 aaKnown RBP15.55■□□□□ 0.08
SS18-202ENST00000269138 ZC3H15Q8WU90 426 aaKnown RBP15.55■□□□□ 0.08
SS18-202ENST00000269138 TEKT1Q969V4 418 aa15.55■□□□□ 0.08
SS18-202ENST00000269138 GPATCH3Q96I76 525 aa15.55■□□□□ 0.08
SS18-202ENST00000269138 HAUS7Q99871 368 aa15.55■□□□□ 0.08
SS18-202ENST00000269138 MRIQ9BWK5 157 aa15.55■□□□□ 0.08
SS18-202ENST00000269138 GGA3Q9NZ52 723 aa15.55■□□□□ 0.08
SS18-202ENST00000269138 ADAMTSL1Q8N6G6 1762 aa15.55■□□□□ 0.08
SS18-202ENST00000269138 MAST3O60307 1309 aa15.54■□□□□ 0.08
SS18-202ENST00000269138 ANGEL2Q5VTE6 544 aaKnown RBP15.54■□□□□ 0.08
SS18-202ENST00000269138 DLK2Q6UY11 383 aa15.54■□□□□ 0.08
SS18-202ENST00000269138 SMC1BQ8NDV3 1235 aa15.54■□□□□ 0.08
SS18-202ENST00000269138 PI4K2BQ8TCG2 481 aa15.54■□□□□ 0.08
SS18-202ENST00000269138 NSUN4Q96CB9 384 aaKnown RBP15.54■□□□□ 0.08
SS18-202ENST00000269138 DAGLAQ9Y4D2 1042 aa15.54■□□□□ 0.08
SS18-202ENST00000269138 TTC41PQ6P2S7 1318 aa15.54■□□□□ 0.08
SS18-202ENST00000269138 CLRN2A0PK11 232 aa15.53■□□□□ 0.08
SS18-202ENST00000269138 PDE4AP27815 886 aa15.53■□□□□ 0.08
SS18-202ENST00000269138 PDE1AP54750 535 aa15.53■□□□□ 0.08
SS18-202ENST00000269138 FMR1Q06787 632 aaKnown RBP eCLIP15.53■□□□□ 0.08
SS18-202ENST00000269138 APOBEC3HQ6NTF7 200 aaKnown RBP15.53■□□□□ 0.08
SS18-202ENST00000269138 HHIPL2Q6UWX4 724 aa15.53■□□□□ 0.08
SS18-202ENST00000269138 CNTROBQ8N137 903 aa15.53■□□□□ 0.08
SS18-202ENST00000269138 ZDHHC15Q96MV8 337 aa15.53■□□□□ 0.08
SS18-202ENST00000269138 GLIS2Q9BZE0 524 aaPredicted RBP15.53■□□□□ 0.08
SS18-202ENST00000269138 TDRD3Q9H7E2 651 aaKnown RBP15.53■□□□□ 0.08
SS18-202ENST00000269138 PAG1Q9NWQ8 432 aa15.53■□□□□ 0.08
SS18-202ENST00000269138 STAP2Q9UGK3 403 aa15.53■□□□□ 0.08
SS18-202ENST00000269138 IDH1O75874 414 aaKnown RBP15.53■□□□□ 0.08
SS18-202ENST00000269138 MAP4K4O95819 1239 aaPredicted RBP15.53■□□□□ 0.08
SS18-202ENST00000269138 ITGBL1O95965 494 aaPredicted RBP15.53■□□□□ 0.08
SS18-202ENST00000269138 USP48Q86UV5 1035 aa15.53■□□□□ 0.08
SS18-202ENST00000269138 PLEKHM2Q8IWE5 1019 aa15.53■□□□□ 0.08
SS18-202ENST00000269138 CCDC136Q96JN2 1154 aa15.53■□□□□ 0.08
SS18-202ENST00000269138 ADM5C9JUS6 153 aa15.52■□□□□ 0.07
SS18-202ENST00000269138 TRAF5O00463 557 aa15.52■□□□□ 0.07
SS18-202ENST00000269138 DCPSQ96C86 337 aaKnown RBP15.52■□□□□ 0.07
SS18-202ENST00000269138 ZNF70Q9UC06 446 aaPredicted RBP15.52■□□□□ 0.07
SS18-202ENST00000269138 GAKO14976 1311 aa15.51■□□□□ 0.07
SS18-202ENST00000269138 GLRX3O76003 335 aaKnown RBP15.51■□□□□ 0.07
SS18-202ENST00000269138 FSTL1Q12841 308 aa15.51■□□□□ 0.07
SS18-202ENST00000269138 TTF1Q15361 905 aaPredicted RBP15.51■□□□□ 0.07
SS18-202ENST00000269138 NAA16Q6N069 864 aaPredicted RBP15.51■□□□□ 0.07
SS18-202ENST00000269138 CENPQQ7L2Z9 268 aaPredicted RBP15.51■□□□□ 0.07
SS18-202ENST00000269138 KRT26Q7Z3Y9 468 aa15.51■□□□□ 0.07
SS18-202ENST00000269138 ADGRA1Q86SQ6 560 aa15.51■□□□□ 0.07
SS18-202ENST00000269138 FAM163AQ96GL9 167 aaPredicted RBP15.51■□□□□ 0.07
SS18-202ENST00000269138 MROH7-TTC4A0A0A0MT08 1334 aa15.5■□□□□ 0.07
SS18-202ENST00000269138 ERC2O15083 957 aa15.5■□□□□ 0.07
SS18-202ENST00000269138 CHGBP05060 677 aa15.5■□□□□ 0.07
SS18-202ENST00000269138 CACNB3P54284 484 aa15.5■□□□□ 0.07
SS18-202ENST00000269138 C1QTNF8P60827 252 aa15.5■□□□□ 0.07
SS18-202ENST00000269138 GSTO1P78417 241 aa15.5■□□□□ 0.07
SS18-202ENST00000269138 SPDYE2Q495Y8 402 aa15.5■□□□□ 0.07
SS18-202ENST00000269138 SLFNL1Q499Z3 407 aa15.5■□□□□ 0.07
SS18-202ENST00000269138 ERICH6BQ5W0A0 696 aa15.5■□□□□ 0.07
SS18-202ENST00000269138 CDC42EP5Q6NZY7 148 aa15.5■□□□□ 0.07
SS18-202ENST00000269138 SKAP1Q86WV1 359 aa15.5■□□□□ 0.07
SS18-202ENST00000269138 MAGEB6Q8N7X4 407 aa15.5■□□□□ 0.07
SS18-202ENST00000269138 VEZTQ9HBM0 779 aa15.5■□□□□ 0.07
SS18-202ENST00000269138 MYO1BO43795 1136 aa15.49■□□□□ 0.07
SS18-202ENST00000269138 LDHCP07864 332 aa15.49■□□□□ 0.07
SS18-202ENST00000269138 CYP7A1P22680 504 aa15.49■□□□□ 0.07
SS18-202ENST00000269138 BTDP43251 543 aa15.49■□□□□ 0.07
SS18-202ENST00000269138 MAP3K12Q12852 859 aa15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms