RNA–Protein interactions for RNA: ENST00000268603.8

CDH11-201, Transcript of cadherin 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH11, Length 6,857 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-201ENST00000268603 TMTC4Q5T4D3 741 aa14.14□□□□□ -0.15
CDH11-201ENST00000268603 KRT28Q7Z3Y7 464 aa14.14□□□□□ -0.15
CDH11-201ENST00000268603 CAPN2P17655 700 aa14.14□□□□□ -0.15
CDH11-201ENST00000268603 PPFIA1Q13136 1202 aa14.14□□□□□ -0.15
CDH11-201ENST00000268603 LRRC2Q9BYS8 371 aa14.14□□□□□ -0.15
CDH11-201ENST00000268603 NSFL1CQ9UNZ2 370 aaKnown RBP14.14□□□□□ -0.15
CDH11-201ENST00000268603 CD2APQ9Y5K6 639 aa14.14□□□□□ -0.15
CDH11-201ENST00000268603 AKNAQ7Z591 1439 aa14.13□□□□□ -0.15
CDH11-201ENST00000268603 UBXN1Q04323 297 aa14.13□□□□□ -0.15
CDH11-201ENST00000268603 GPR161Q8N6U8 529 aaKnown RBP14.13□□□□□ -0.15
CDH11-201ENST00000268603 IFT74Q96LB3 600 aa14.13□□□□□ -0.15
CDH11-201ENST00000268603 PAXBP1Q9Y5B6 917 aa14.13□□□□□ -0.15
CDH11-201ENST00000268603 SPOPO43791 374 aa14.13□□□□□ -0.15
CDH11-201ENST00000268603 MUM1L1Q5H9M0 696 aa14.13□□□□□ -0.15
CDH11-201ENST00000268603 NKIRAS1Q9NYS0 192 aa14.13□□□□□ -0.15
CDH11-201ENST00000268603 MARCKSP29966 332 aaPredicted RBP14.13□□□□□ -0.15
CDH11-201ENST00000268603 PTPDC1A2A3K4 754 aa14.13□□□□□ -0.15
CDH11-201ENST00000268603 SPDYE2BA6NHP3 402 aa14.13□□□□□ -0.15
CDH11-201ENST00000268603 SPDYE6P0CI01 402 aa14.13□□□□□ -0.15
CDH11-201ENST00000268603 INPP1P49441 399 aa14.13□□□□□ -0.15
CDH11-201ENST00000268603 IFRD2Q12894 506 aaPredicted RBP14.13□□□□□ -0.15
CDH11-201ENST00000268603 CHRNA2Q15822 529 aa14.13□□□□□ -0.15
CDH11-201ENST00000268603 MED10Q9BTT4 135 aa14.13□□□□□ -0.15
CDH11-201ENST00000268603 CSRNP2Q9H175 543 aa14.13□□□□□ -0.15
CDH11-201ENST00000268603 DDX39AO00148 427 aaKnown RBP14.13□□□□□ -0.15
CDH11-201ENST00000268603 NBPF1Q3BBV0 1214 aa14.13□□□□□ -0.15
CDH11-201ENST00000268603 FYB2Q5VWT5 728 aa14.13□□□□□ -0.15
CDH11-201ENST00000268603 LRPPRCP42704 1394 aaKnown RBP14.13□□□□□ -0.15
CDH11-201ENST00000268603 PLEKHH1Q9ULM0 1364 aa14.13□□□□□ -0.15
CDH11-201ENST00000268603 EBAG9O00559 213 aa14.12□□□□□ -0.15
CDH11-201ENST00000268603 MCM9Q9NXL9 1143 aa14.12□□□□□ -0.15
CDH11-201ENST00000268603 VPS18Q9P253 973 aa14.12□□□□□ -0.15
CDH11-201ENST00000268603 CTAGE9A4FU28 777 aa14.12□□□□□ -0.15
CDH11-201ENST00000268603 LMNTD2Q8IXW0 634 aa14.12□□□□□ -0.15
CDH11-201ENST00000268603 FNBP4Q8N3X1 1017 aaPredicted RBP14.12□□□□□ -0.15
CDH11-201ENST00000268603 SAP30BPQ9UHR5 308 aaKnown RBP14.12□□□□□ -0.15
CDH11-201ENST00000268603 ERICH3Q5RHP9 1530 aa14.12□□□□□ -0.15
CDH11-201ENST00000268603 ZNF165P49910 485 aa14.12□□□□□ -0.15
CDH11-201ENST00000268603 SLC12A2P55011 1212 aa14.12□□□□□ -0.15
CDH11-201ENST00000268603 ITKQ08881 620 aa14.12□□□□□ -0.15
CDH11-201ENST00000268603 KIF22Q14807 665 aa14.12□□□□□ -0.15
CDH11-201ENST00000268603 RILPL1Q5EBL4 403 aa14.12□□□□□ -0.15
CDH11-201ENST00000268603 CHST3Q7LGC8 479 aa14.12□□□□□ -0.15
CDH11-201ENST00000268603 IFNL2Q8IZJ0 200 aa14.12□□□□□ -0.15
CDH11-201ENST00000268603 CCDC42Q96M95 316 aa14.12□□□□□ -0.15
CDH11-201ENST00000268603 TXNDC9O14530 226 aa14.12□□□□□ -0.15
CDH11-201ENST00000268603 SMTNP53814 917 aa14.12□□□□□ -0.15
CDH11-201ENST00000268603 CNNM2Q9H8M5 875 aa14.12□□□□□ -0.15
CDH11-201ENST00000268603 GBP1P32455 592 aa14.12□□□□□ -0.15
CDH11-201ENST00000268603 NYXQ9GZU5 481 aa14.12□□□□□ -0.15
CDH11-201ENST00000268603 USTQ9Y2C2 406 aa14.12□□□□□ -0.15
CDH11-201ENST00000268603 BMP15O95972 392 aa14.11□□□□□ -0.15
CDH11-201ENST00000268603 EYA3Q99504 573 aa14.11□□□□□ -0.15
CDH11-201ENST00000268603 CETN3O15182 167 aa14.11□□□□□ -0.15
CDH11-201ENST00000268603 TMPOP42166 694 aaKnown RBP14.11□□□□□ -0.15
CDH11-201ENST00000268603 FCHSD1Q86WN1 690 aa14.11□□□□□ -0.15
CDH11-201ENST00000268603 ZNF131P52739 623 aa14.11□□□□□ -0.15
CDH11-201ENST00000268603 CDAN1Q8IWY9 1227 aa14.11□□□□□ -0.15
CDH11-201ENST00000268603 CARD10Q9BWT7 1032 aa14.11□□□□□ -0.15
CDH11-201ENST00000268603 DMRT2Q9Y5R5 561 aa14.11□□□□□ -0.15
CDH11-201ENST00000268603 HGSO14964 777 aaPredicted RBP14.11□□□□□ -0.15
CDH11-201ENST00000268603 PPFIA2O75334 1257 aa14.11□□□□□ -0.15
CDH11-201ENST00000268603 EPB41P11171 864 aaKnown RBP14.11□□□□□ -0.15
CDH11-201ENST00000268603 RBBP5Q15291 538 aaKnown RBP14.11□□□□□ -0.15
CDH11-201ENST00000268603 BSPRYQ5W0U4 402 aa14.11□□□□□ -0.15
CDH11-201ENST00000268603 TMTC2Q8N394 836 aa14.11□□□□□ -0.15
CDH11-201ENST00000268603 TSPYL2Q9H2G4 693 aaPredicted RBP14.11□□□□□ -0.15
CDH11-201ENST00000268603 KRT83P78385 493 aa14.11□□□□□ -0.15
CDH11-201ENST00000268603 RPS6KA2Q15349 733 aa14.11□□□□□ -0.15
CDH11-201ENST00000268603 TNPO1Q92973 898 aaKnown RBP14.11□□□□□ -0.15
CDH11-201ENST00000268603 CUX1P39880 1505 aa14.11□□□□□ -0.15
CDH11-201ENST00000268603 KRT2P35908 639 aa14.11□□□□□ -0.15
CDH11-201ENST00000268603 ZNF569Q5MCW4 686 aa14.11□□□□□ -0.15
CDH11-201ENST00000268603 UTP14CQ5TAP6 766 aaKnown RBP14.11□□□□□ -0.15
CDH11-201ENST00000268603 PDCD7Q8N8D1 485 aaKnown RBP14.11□□□□□ -0.15
CDH11-201ENST00000268603 GUCA1BQ9UMX6 200 aa14.11□□□□□ -0.15
CDH11-201ENST00000268603 LIN9Q5TKA1 542 aa14.1□□□□□ -0.15
CDH11-201ENST00000268603 SMIM24O75264 130 aa14.1□□□□□ -0.15
CDH11-201ENST00000268603 SH2D4AQ9H788 454 aa14.1□□□□□ -0.15
CDH11-201ENST00000268603 PHF8Q9UPP1 1060 aa14.1□□□□□ -0.15
CDH11-201ENST00000268603 PRPF6O94906 941 aaKnown RBP14.1□□□□□ -0.15
CDH11-201ENST00000268603 CCDC122Q5T0U0 273 aa14.1□□□□□ -0.15
CDH11-201ENST00000268603 NOX5Q96PH1 765 aa14.1□□□□□ -0.15
CDH11-201ENST00000268603 FAM193BQ96PV7 902 aaPredicted RBP14.1□□□□□ -0.15
CDH11-201ENST00000268603 SPC25Q9HBM1 224 aa14.1□□□□□ -0.15
CDH11-201ENST00000268603 NCAPD3P42695 1498 aa14.1□□□□□ -0.15
CDH11-201ENST00000268603 NESP48681 1621 aa14.1□□□□□ -0.15
CDH11-201ENST00000268603 ZNF830Q96NB3 372 aaPredicted RBP14.1□□□□□ -0.15
CDH11-201ENST00000268603 GPCPD1Q9NPB8 672 aa14.1□□□□□ -0.15
CDH11-201ENST00000268603 DNAI1Q9UI46 699 aa14.1□□□□□ -0.15
CDH11-201ENST00000268603 KRT86O43790 486 aa14.1□□□□□ -0.15
CDH11-201ENST00000268603 NR1I2O75469 434 aa14.1□□□□□ -0.15
CDH11-201ENST00000268603 EIF6P56537 245 aaKnown RBP14.1□□□□□ -0.15
CDH11-201ENST00000268603 BAG1Q99933 345 aaPredicted RBP14.1□□□□□ -0.15
CDH11-201ENST00000268603 RTCBQ9Y3I0 505 aaKnown RBP14.1□□□□□ -0.15
CDH11-201ENST00000268603 TNFAIP3P21580 790 aa14.09□□□□□ -0.15
CDH11-201ENST00000268603 ANKRD24Q8TF21 1146 aa14.09□□□□□ -0.15
CDH11-201ENST00000268603 AZI2Q9H6S1 392 aa14.09□□□□□ -0.15
CDH11-201ENST00000268603 ECHDC1Q9NTX5 307 aa14.09□□□□□ -0.15
CDH11-201ENST00000268603 BZW2Q9Y6E2 419 aaKnown RBP14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms