RNA–Protein interactions for RNA: ENST00000262768.11

TIMP2-201, Transcript of TIMP metallopeptidase inhibitor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TIMP2, Length 3,652 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP2-201ENST00000262768 PXDNLA1KZ92 1463 aa17.61■□□□□ 0.41
TIMP2-201ENST00000262768 NR1I2O75469 434 aa17.61■□□□□ 0.41
TIMP2-201ENST00000262768 SMC2O95347 1197 aa17.61■□□□□ 0.41
TIMP2-201ENST00000262768 DYNLL1P63167 89 aaKnown RBP17.61■□□□□ 0.41
TIMP2-201ENST00000262768 FAM196AQ6ZSG2 479 aa17.61■□□□□ 0.41
TIMP2-201ENST00000262768 ZSCAN30Q86W11 494 aa17.61■□□□□ 0.41
TIMP2-201ENST00000262768 USP28Q96RU2 1077 aa17.61■□□□□ 0.41
TIMP2-201ENST00000262768 MKNK2Q9HBH9 465 aa17.61■□□□□ 0.41
TIMP2-201ENST00000262768 VAT1LQ9HCJ6 419 aa17.61■□□□□ 0.41
TIMP2-201ENST00000262768 ZNF165P49910 485 aa17.6■□□□□ 0.41
TIMP2-201ENST00000262768 RIPOR2Q9Y4F9 1068 aa17.6■□□□□ 0.41
TIMP2-201ENST00000262768 CIAO1O76071 339 aa17.6■□□□□ 0.41
TIMP2-201ENST00000262768 RBM5P52756 815 aaKnown RBP eCLIP17.6■□□□□ 0.41
TIMP2-201ENST00000262768 NKX1-1Q15270 411 aaPredicted RBP17.6■□□□□ 0.41
TIMP2-201ENST00000262768 TRAPPC3LQ5T215 181 aa17.6■□□□□ 0.41
TIMP2-201ENST00000262768 VSIG10Q8N0Z9 540 aa17.6■□□□□ 0.41
TIMP2-201ENST00000262768 KCNJ14Q9UNX9 436 aa17.6■□□□□ 0.41
TIMP2-201ENST00000262768 MED1Q15648 1581 aaPredicted RBP17.6■□□□□ 0.41
TIMP2-201ENST00000262768 TSPY2A6NKD2 308 aa17.6■□□□□ 0.41
TIMP2-201ENST00000262768 CCDC39Q9UFE4 941 aa17.6■□□□□ 0.41
TIMP2-201ENST00000262768 PARP10Q53GL7 1025 aa17.59■□□□□ 0.41
TIMP2-201ENST00000262768 FAM47AQ5JRC9 791 aa17.59■□□□□ 0.41
TIMP2-201ENST00000262768 TBC1D9BQ66K14 1250 aa17.59■□□□□ 0.41
TIMP2-201ENST00000262768 AMOTL1Q8IY63 956 aa17.59■□□□□ 0.41
TIMP2-201ENST00000262768 LCORLQ8N3X6 602 aa17.59■□□□□ 0.41
TIMP2-201ENST00000262768 SAP30BPQ9UHR5 308 aaKnown RBP17.59■□□□□ 0.41
TIMP2-201ENST00000262768 RPS8P62241 208 aaKnown RBP17.59■□□□□ 0.41
TIMP2-201ENST00000262768 MCM9Q9NXL9 1143 aa17.59■□□□□ 0.41
TIMP2-201ENST00000262768 USP42Q9H9J4 1324 aaKnown RBP17.58■□□□□ 0.41
TIMP2-201ENST00000262768 GOLGA6L6A8MZA4 724 aa17.58■□□□□ 0.41
TIMP2-201ENST00000262768 TRIM37O94972 964 aa17.58■□□□□ 0.41
TIMP2-201ENST00000262768 ZNF445P59923 1031 aa17.58■□□□□ 0.41
TIMP2-201ENST00000262768 MSL1Q68DK7 614 aa17.58■□□□□ 0.41
TIMP2-201ENST00000262768 IFNL3Q8IZI9 196 aa17.58■□□□□ 0.41
TIMP2-201ENST00000262768 LETM1O95202 739 aaPredicted RBP17.58■□□□□ 0.4
TIMP2-201ENST00000262768 SSRP1Q08945 709 aaKnown RBP17.58■□□□□ 0.4
TIMP2-201ENST00000262768 ANGEL1Q9UNK9 670 aaKnown RBP17.58■□□□□ 0.4
TIMP2-201ENST00000262768 NSUN7Q8NE18 718 aaKnown RBP17.58■□□□□ 0.4
TIMP2-201ENST00000262768 CDCA7Q9BWT1 371 aaPredicted RBP17.58■□□□□ 0.4
TIMP2-201ENST00000262768 TYRO3Q06418 890 aa17.57■□□□□ 0.4
TIMP2-201ENST00000262768 PICALMQ13492 652 aa17.57■□□□□ 0.4
TIMP2-201ENST00000262768 ADD2P35612 726 aa17.57■□□□□ 0.4
TIMP2-201ENST00000262768 MROH5Q6ZUA9 1318 aa17.57■□□□□ 0.4
TIMP2-201ENST00000262768 GOLGB1Q14789 3259 aaKnown RBP17.57■□□□□ 0.4
TIMP2-201ENST00000262768 EIF5P55010 431 aaKnown RBP17.57■□□□□ 0.4
TIMP2-201ENST00000262768 IQCA1Q86XH1 822 aa17.57■□□□□ 0.4
TIMP2-201ENST00000262768 HOMER1Q86YM7 354 aa17.57■□□□□ 0.4
TIMP2-201ENST00000262768 CNBD1Q8NA66 436 aa17.57■□□□□ 0.4
TIMP2-201ENST00000262768 ZNF622Q969S3 477 aaKnown RBP eCLIP17.57■□□□□ 0.4
TIMP2-201ENST00000262768 SENP2Q9HC62 589 aa17.57■□□□□ 0.4
TIMP2-201ENST00000262768 CDKL5O76039 1030 aa17.56■□□□□ 0.4
TIMP2-201ENST00000262768 CDK11BP21127 795 aaKnown RBP17.56■□□□□ 0.4
TIMP2-201ENST00000262768 TBC1D10CQ8IV04 446 aa17.56■□□□□ 0.4
TIMP2-201ENST00000262768 SPATA31A1Q5TZJ5 1347 aa17.56■□□□□ 0.4
TIMP2-201ENST00000262768 RPAP1Q9BWH6 1393 aaPredicted RBP17.56■□□□□ 0.4
TIMP2-201ENST00000262768 USP17L12C9JPN9 530 aa17.56■□□□□ 0.4
TIMP2-201ENST00000262768 USP17L21D6R901 530 aa17.56■□□□□ 0.4
TIMP2-201ENST00000262768 ST3GAL1Q11201 340 aa17.56■□□□□ 0.4
TIMP2-201ENST00000262768 HIBADHP31937 336 aaKnown RBP17.56■□□□□ 0.4
TIMP2-201ENST00000262768 RTN1Q16799 776 aa17.56■□□□□ 0.4
TIMP2-201ENST00000262768 UBE2Q2LH0YL09 131 aa17.55■□□□□ 0.4
TIMP2-201ENST00000262768 KLHL10Q6JEL2 608 aa17.55■□□□□ 0.4
TIMP2-201ENST00000262768 ZSCAN29Q8IWY8 852 aaPredicted RBP17.55■□□□□ 0.4
TIMP2-201ENST00000262768 ZSCAN16Q9H4T2 348 aaPredicted RBP17.55■□□□□ 0.4
TIMP2-201ENST00000262768 GPR108Q9NPR9 543 aa17.55■□□□□ 0.4
TIMP2-201ENST00000262768 NCOA3Q9Y6Q9 1424 aa17.55■□□□□ 0.4
TIMP2-201ENST00000262768 INTS5Q6P9B9 1019 aaKnown RBP17.55■□□□□ 0.4
TIMP2-201ENST00000262768 C3orf67Q6ZVT6 689 aa17.55■□□□□ 0.4
TIMP2-201ENST00000262768 LINC00116Q8NCU8 138 aa17.55■□□□□ 0.4
TIMP2-201ENST00000262768 RGPD5Q99666 1765 aa17.54■□□□□ 0.4
TIMP2-201ENST00000262768 MARCH6O60337 910 aa17.54■□□□□ 0.4
TIMP2-201ENST00000262768 IFIT1BQ5T764 474 aaKnown RBP17.54■□□□□ 0.4
TIMP2-201ENST00000262768 PFKFB2O60825 505 aa17.54■□□□□ 0.4
TIMP2-201ENST00000262768 DHX8Q14562 1220 aaKnown RBP17.54■□□□□ 0.4
TIMP2-201ENST00000262768 ZSWIM5Q9P217 1185 aa17.54■□□□□ 0.4
TIMP2-201ENST00000262768 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.53■□□□□ 0.4
TIMP2-201ENST00000262768 ERVV-1B6SEH8 477 aa17.53■□□□□ 0.4
TIMP2-201ENST00000262768 SMIM22K7EJ46 135 aa17.53■□□□□ 0.4
TIMP2-201ENST00000262768 KLRK1P26718 216 aa17.53■□□□□ 0.4
TIMP2-201ENST00000262768 EIF6P56537 245 aaKnown RBP17.53■□□□□ 0.4
TIMP2-201ENST00000262768 CYB5R4Q7L1T6 521 aa17.53■□□□□ 0.4
TIMP2-201ENST00000262768 TRIM28Q13263 835 aaKnown RBP17.53■□□□□ 0.4
TIMP2-201ENST00000262768 UIMC1Q96RL1 719 aa17.53■□□□□ 0.4
TIMP2-201ENST00000262768 CLIC4Q9Y696 253 aa17.53■□□□□ 0.4
TIMP2-201ENST00000262768 COL15A1P39059 1388 aa17.53■□□□□ 0.4
TIMP2-201ENST00000262768 MED23Q9ULK4 1368 aa17.53■□□□□ 0.4
TIMP2-201ENST00000262768 SPTLC2O15270 562 aa17.52■□□□□ 0.4
TIMP2-201ENST00000262768 EPB41L2O43491 1005 aaKnown RBP17.52■□□□□ 0.4
TIMP2-201ENST00000262768 UFL1O94874 794 aa17.52■□□□□ 0.4
TIMP2-201ENST00000262768 CSF1RP07333 972 aa17.52■□□□□ 0.4
TIMP2-201ENST00000262768 XBP1P17861 261 aa17.52■□□□□ 0.4
TIMP2-201ENST00000262768 PRDX5P30044 214 aa17.52■□□□□ 0.4
TIMP2-201ENST00000262768 DIXDC1Q155Q3 683 aa17.52■□□□□ 0.4
TIMP2-201ENST00000262768 CAMTA2O94983 1202 aa17.52■□□□□ 0.4
TIMP2-201ENST00000262768 ESR2Q92731 530 aa17.52■□□□□ 0.4
TIMP2-201ENST00000262768 DCCP43146 1447 aa17.52■□□□□ 0.4
TIMP2-201ENST00000262768 BAZ2BQ9UIF8 2168 aaKnown RBP17.52■□□□□ 0.4
TIMP2-201ENST00000262768 PATL2C9JE40 543 aaKnown RBP17.52■□□□□ 0.39
TIMP2-201ENST00000262768 MPHOSPH10O00566 681 aaKnown RBP17.52■□□□□ 0.39
TIMP2-201ENST00000262768 SLC3A2P08195 630 aaKnown RBP17.52■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms