RNA–Protein interactions for RNA: ENST00000262570.9

CHCHD3-201, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHCHD3, Length 1,598 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-201ENST00000262570 HDAC9Q9UKV0 1011 aa20.21■□□□□ 0.83
CHCHD3-201ENST00000262570 IQCA1LA6NCM1 817 aa20.2■□□□□ 0.82
CHCHD3-201ENST00000262570 H7C1D1 291 aa20.2■□□□□ 0.82
CHCHD3-201ENST00000262570 ZNF526Q8TF50 670 aaPredicted RBP20.2■□□□□ 0.82
CHCHD3-201ENST00000262570 MRIQ9BWK5 157 aa20.2■□□□□ 0.82
CHCHD3-201ENST00000262570 HACL1Q9UJ83 578 aa20.2■□□□□ 0.82
CHCHD3-201ENST00000262570 MAST3O60307 1309 aa20.19■□□□□ 0.82
CHCHD3-201ENST00000262570 MAP4K4O95819 1239 aaPredicted RBP20.19■□□□□ 0.82
CHCHD3-201ENST00000262570 HDLBPQ00341 1268 aaKnown RBP20.19■□□□□ 0.82
CHCHD3-201ENST00000262570 NSUN4Q96CB9 384 aaKnown RBP20.19■□□□□ 0.82
CHCHD3-201ENST00000262570 RRAGCQ9HB90 399 aa20.19■□□□□ 0.82
CHCHD3-201ENST00000262570 RAI14Q9P0K7 980 aa20.19■□□□□ 0.82
CHCHD3-201ENST00000262570 IDH1O75874 414 aaKnown RBP20.18■□□□□ 0.82
CHCHD3-201ENST00000262570 VEGFAP15692 232 aaPredicted RBP20.18■□□□□ 0.82
CHCHD3-201ENST00000262570 MECOMQ03112 1051 aa20.18■□□□□ 0.82
CHCHD3-201ENST00000262570 ZNF384Q8TF68 577 aa20.18■□□□□ 0.82
CHCHD3-201ENST00000262570 NMRK2Q9NPI5 230 aa20.18■□□□□ 0.82
CHCHD3-201ENST00000262570 SERPINA10Q9UK55 444 aa20.18■□□□□ 0.82
CHCHD3-201ENST00000262570 MAP3K12Q12852 859 aa20.17■□□□□ 0.82
CHCHD3-201ENST00000262570 SAMD7Q7Z3H4 446 aa20.17■□□□□ 0.82
CHCHD3-201ENST00000262570 DZIP1Q86YF9 867 aaKnown RBP20.17■□□□□ 0.82
CHCHD3-201ENST00000262570 KBTBD3Q8NAB2 608 aa20.17■□□□□ 0.82
CHCHD3-201ENST00000262570 TAF1DQ9H5J8 278 aaPredicted RBP20.17■□□□□ 0.82
CHCHD3-201ENST00000262570 MYOZ2Q9NPC6 264 aa20.17■□□□□ 0.82
CHCHD3-201ENST00000262570 ADARB2Q9NS39 739 aaKnown RBP20.17■□□□□ 0.82
CHCHD3-201ENST00000262570 EGFRP00533 1210 aa20.17■□□□□ 0.82
CHCHD3-201ENST00000262570 EPHX2P34913 555 aa20.17■□□□□ 0.82
CHCHD3-201ENST00000262570 CRKP46108 304 aa20.17■□□□□ 0.82
CHCHD3-201ENST00000262570 RGS3P49796 1198 aa20.17■□□□□ 0.82
CHCHD3-201ENST00000262570 DIXDC1Q155Q3 683 aa20.17■□□□□ 0.82
CHCHD3-201ENST00000262570 TTC22Q5TAA0 569 aa20.17■□□□□ 0.82
CHCHD3-201ENST00000262570 HHIPL2Q6UWX4 724 aa20.17■□□□□ 0.82
CHCHD3-201ENST00000262570 MTMR14Q8NCE2 650 aa20.16■□□□□ 0.82
CHCHD3-201ENST00000262570 TEKT1Q969V4 418 aa20.16■□□□□ 0.82
CHCHD3-201ENST00000262570 EVI5LQ96CN4 794 aa20.16■□□□□ 0.82
CHCHD3-201ENST00000262570 FAM163AQ96GL9 167 aaPredicted RBP20.16■□□□□ 0.82
CHCHD3-201ENST00000262570 GPBP1L1Q9HC44 474 aaPredicted RBP20.16■□□□□ 0.82
CHCHD3-201ENST00000262570 SCN4AP35499 1836 aa20.16■□□□□ 0.82
CHCHD3-201ENST00000262570 GSPT1P15170 499 aaKnown RBP20.15■□□□□ 0.82
CHCHD3-201ENST00000262570 CFAP100Q494V2 611 aa20.15■□□□□ 0.82
CHCHD3-201ENST00000262570 TBC1D10BQ4KMP7 808 aaPredicted RBP20.15■□□□□ 0.82
CHCHD3-201ENST00000262570 TMED8Q6PL24 325 aaPredicted RBP20.15■□□□□ 0.82
CHCHD3-201ENST00000262570 SLF2Q8IX21 1173 aa20.15■□□□□ 0.82
CHCHD3-201ENST00000262570 TRPM4Q8TD43 1214 aa20.15■□□□□ 0.82
CHCHD3-201ENST00000262570 ZBED3Q96IU2 234 aaPredicted RBP20.15■□□□□ 0.82
CHCHD3-201ENST00000262570 TRIM6-TRIM34B2RNG4 842 aa20.14■□□□□ 0.81
CHCHD3-201ENST00000262570 HIRAP54198 1017 aaPredicted RBP20.14■□□□□ 0.81
CHCHD3-201ENST00000262570 GSTO1P78417 241 aa20.14■□□□□ 0.81
CHCHD3-201ENST00000262570 KIF4BQ2VIQ3 1234 aa20.14■□□□□ 0.81
CHCHD3-201ENST00000262570 RBM26Q5T8P6 1007 aaKnown RBP20.14■□□□□ 0.81
CHCHD3-201ENST00000262570 SLC9C2Q5TAH2 1124 aa20.14■□□□□ 0.81
CHCHD3-201ENST00000262570 NAA16Q6N069 864 aaPredicted RBP20.14■□□□□ 0.81
CHCHD3-201ENST00000262570 USP50Q70EL3 339 aaPredicted RBP20.14■□□□□ 0.81
CHCHD3-201ENST00000262570 MAGEB6Q8N7X4 407 aa20.14■□□□□ 0.81
CHCHD3-201ENST00000262570 ZNF784Q8NCA9 323 aaPredicted RBP20.14■□□□□ 0.81
CHCHD3-201ENST00000262570 ZDHHC15Q96MV8 337 aa20.14■□□□□ 0.81
CHCHD3-201ENST00000262570 DDX24Q9GZR7 859 aaKnown RBP eCLIP20.14■□□□□ 0.815e-14■□□□□ 9
CHCHD3-201ENST00000262570 PCDHAC2Q9Y5I4 1007 aa20.14■□□□□ 0.81
CHCHD3-201ENST00000262570 GAKO14976 1311 aa20.14■□□□□ 0.81
CHCHD3-201ENST00000262570 WNT10BO00744 389 aa20.13■□□□□ 0.81
CHCHD3-201ENST00000262570 LDHCP07864 332 aa20.13■□□□□ 0.81
CHCHD3-201ENST00000262570 PDE6AP16499 860 aa20.13■□□□□ 0.81
CHCHD3-201ENST00000262570 RBM5P52756 815 aaKnown RBP eCLIP20.13■□□□□ 0.81
CHCHD3-201ENST00000262570 DLGAP5Q15398 846 aa20.13■□□□□ 0.81
CHCHD3-201ENST00000262570 PNMA8AQ86V59 439 aaPredicted RBP20.13■□□□□ 0.81
CHCHD3-201ENST00000262570 CNTROBQ8N137 903 aa20.13■□□□□ 0.81
CHCHD3-201ENST00000262570 DAGLAQ9Y4D2 1042 aa20.13■□□□□ 0.81
CHCHD3-201ENST00000262570 DOCK2Q92608 1830 aa20.13■□□□□ 0.81
CHCHD3-201ENST00000262570 MYO5AQ9Y4I1 1855 aaKnown RBP20.13■□□□□ 0.81
CHCHD3-201ENST00000262570 SPDYE2BA6NHP3 402 aa20.12■□□□□ 0.81
CHCHD3-201ENST00000262570 SPDYE6P0CI01 402 aa20.12■□□□□ 0.81
CHCHD3-201ENST00000262570 APOBEC3HQ6NTF7 200 aaKnown RBP20.12■□□□□ 0.81
CHCHD3-201ENST00000262570 RILPL2Q969X0 211 aa20.12■□□□□ 0.81
CHCHD3-201ENST00000262570 PRMT6Q96LA8 375 aaPredicted RBP20.12■□□□□ 0.81
CHCHD3-201ENST00000262570 FSD1Q9BTV5 496 aa20.12■□□□□ 0.81
CHCHD3-201ENST00000262570 MROH7-TTC4A0A0A0MT08 1334 aa20.12■□□□□ 0.81
CHCHD3-201ENST00000262570 TCRBV5S4A2TA0A5A2 114 aa20.12■□□□□ 0.81
CHCHD3-201ENST00000262570 ADD2P35612 726 aa20.12■□□□□ 0.81
CHCHD3-201ENST00000262570 NBPF9Q3BBW0 867 aa20.12■□□□□ 0.81
CHCHD3-201ENST00000262570 ZSCAN25Q6NSZ9 544 aa20.12■□□□□ 0.81
CHCHD3-201ENST00000262570 ADGRA1Q86SQ6 560 aa20.12■□□□□ 0.81
CHCHD3-201ENST00000262570 CHGBP05060 677 aa20.11■□□□□ 0.81
CHCHD3-201ENST00000262570 CYP7A1P22680 504 aa20.11■□□□□ 0.81
CHCHD3-201ENST00000262570 UBE3CQ15386 1083 aa20.11■□□□□ 0.81
CHCHD3-201ENST00000262570 TICAM2Q86XR7 235 aa20.11■□□□□ 0.81
CHCHD3-201ENST00000262570 ZNF532Q9HCE3 1301 aa20.11■□□□□ 0.81
CHCHD3-201ENST00000262570 GPR75-ASB3A0A0A6YYF3 556 aa20.1■□□□□ 0.81
CHCHD3-201ENST00000262570 ZFYP08048 801 aaPredicted RBP20.1■□□□□ 0.81
CHCHD3-201ENST00000262570 SDSP20132 328 aa20.1■□□□□ 0.81
CHCHD3-201ENST00000262570 LRRFIP1Q32MZ4 808 aaKnown RBP20.1■□□□□ 0.81
CHCHD3-201ENST00000262570 KIF3CO14782 793 aa20.09■□□□□ 0.81
CHCHD3-201ENST00000262570 RNF113AO15541 343 aaKnown RBP20.09■□□□□ 0.81
CHCHD3-201ENST00000262570 SLFNL1Q499Z3 407 aa20.09■□□□□ 0.81
CHCHD3-201ENST00000262570 EAPPQ56P03 285 aaPredicted RBP20.09■□□□□ 0.81
CHCHD3-201ENST00000262570 BMP2KLQ5H9B9 411 aa20.09■□□□□ 0.81
CHCHD3-201ENST00000262570 POTEIP0CG38 1075 aa20.08■□□□□ 0.81
CHCHD3-201ENST00000262570 POTEJP0CG39 1038 aa20.08■□□□□ 0.81
CHCHD3-201ENST00000262570 BTDP43251 543 aa20.08■□□□□ 0.81
CHCHD3-201ENST00000262570 ZC3H15Q8WU90 426 aaKnown RBP20.08■□□□□ 0.81
CHCHD3-201ENST00000262570 PGAP2Q9UHJ9 254 aa20.08■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 976.4 ms