RNA–Protein interactions for RNA: ENST00000259006.7

LIMD2-201, Transcript of LIM domain containing 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIMD2, Length 3,193 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2-201ENST00000259006 SERPINC1P01008 464 aa16.06■□□□□ 0.16
LIMD2-201ENST00000259006 CDC25BP30305 580 aa16.06■□□□□ 0.16
LIMD2-201ENST00000259006 KRT32Q14532 448 aa16.06■□□□□ 0.16
LIMD2-201ENST00000259006 TTC19Q6DKK2 380 aaPredicted RBP16.06■□□□□ 0.16
LIMD2-201ENST00000259006 SARM1Q6SZW1 724 aa16.06■□□□□ 0.16
LIMD2-201ENST00000259006 MRPS27Q92552 414 aaKnown RBP16.06■□□□□ 0.16
LIMD2-201ENST00000259006 ZNF396Q96N95 335 aaPredicted RBP16.06■□□□□ 0.16
LIMD2-201ENST00000259006 NEMFO60524 1076 aa16.06■□□□□ 0.16
LIMD2-201ENST00000259006 ALDH1L1O75891 902 aa16.06■□□□□ 0.16
LIMD2-201ENST00000259006 MNAT1P51948 309 aa16.06■□□□□ 0.16
LIMD2-201ENST00000259006 GSCP56915 257 aaPredicted RBP16.06■□□□□ 0.16
LIMD2-201ENST00000259006 NEXNQ0ZGT2 675 aa16.06■□□□□ 0.16
LIMD2-201ENST00000259006 SKIDA1Q1XH10 827 aa16.06■□□□□ 0.16
LIMD2-201ENST00000259006 CFAP100Q494V2 611 aa16.06■□□□□ 0.16
LIMD2-201ENST00000259006 MCMDC2Q4G0Z9 681 aa16.06■□□□□ 0.16
LIMD2-201ENST00000259006 TMCO3Q6UWJ1 677 aa16.06■□□□□ 0.16
LIMD2-201ENST00000259006 ILDR1Q86SU0 546 aaPredicted RBP16.06■□□□□ 0.16
LIMD2-201ENST00000259006 AK7Q96M32 723 aa16.06■□□□□ 0.16
LIMD2-201ENST00000259006 SLC24A3Q9HC58 644 aa16.06■□□□□ 0.16
LIMD2-201ENST00000259006 DPF2Q92785 391 aa16.05■□□□□ 0.16
LIMD2-201ENST00000259006 CTAGE5O15320 804 aa16.05■□□□□ 0.16
LIMD2-201ENST00000259006 SLC3A2P08195 630 aaKnown RBP16.05■□□□□ 0.16
LIMD2-201ENST00000259006 TNNI3KQ59H18 835 aa16.05■□□□□ 0.16
LIMD2-201ENST00000259006 ENGASEQ8NFI3 743 aa16.05■□□□□ 0.16
LIMD2-201ENST00000259006 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.05■□□□□ 0.16
LIMD2-201ENST00000259006 FPGT-TNNI3KV9GXZ4 949 aa16.05■□□□□ 0.16
LIMD2-201ENST00000259006 MED23Q9ULK4 1368 aa16.05■□□□□ 0.16
LIMD2-201ENST00000259006 DDX58O95786 925 aaKnown RBP16.04■□□□□ 0.16
LIMD2-201ENST00000259006 DHX32Q7L7V1 743 aaKnown RBP16.04■□□□□ 0.16
LIMD2-201ENST00000259006 LEKR1Q6ZMV7 388 aa16.04■□□□□ 0.16
LIMD2-201ENST00000259006 U3KPZ7 1027 aaPredicted RBP16.04■□□□□ 0.16
LIMD2-201ENST00000259006 FAM208AQ9UK61 1670 aaKnown RBP16.04■□□□□ 0.16
LIMD2-201ENST00000259006 RNMTO43148 476 aaKnown RBP16.03■□□□□ 0.16
LIMD2-201ENST00000259006 SPECC1Q5M775 1068 aa16.03■□□□□ 0.16
LIMD2-201ENST00000259006 AIFM3Q96NN9 605 aa16.03■□□□□ 0.16
LIMD2-201ENST00000259006 KIAA1468Q9P260 1216 aa16.03■□□□□ 0.16
LIMD2-201ENST00000259006 ZNF609O15014 1411 aa16.03■□□□□ 0.16
LIMD2-201ENST00000259006 MPHOSPH10O00566 681 aaKnown RBP16.03■□□□□ 0.16
LIMD2-201ENST00000259006 H2AFXP16104 143 aaPredicted RBP16.03■□□□□ 0.16
LIMD2-201ENST00000259006 FKBP4Q02790 459 aaKnown RBP eCLIP16.03■□□□□ 0.16
LIMD2-201ENST00000259006 TMEM232C9JQI7 657 aa16.03■□□□□ 0.16
LIMD2-201ENST00000259006 PPP1R12AO14974 1030 aaPredicted RBP16.03■□□□□ 0.16
LIMD2-201ENST00000259006 PLEKHO1Q53GL0 409 aaPredicted RBP16.03■□□□□ 0.16
LIMD2-201ENST00000259006 PPM1EQ8WY54 764 aa16.03■□□□□ 0.16
LIMD2-201ENST00000259006 PFKFB2O60825 505 aa16.02■□□□□ 0.16
LIMD2-201ENST00000259006 GSDMDP57764 484 aa16.02■□□□□ 0.16
LIMD2-201ENST00000259006 MMS22LQ6ZRQ5 1243 aa16.02■□□□□ 0.16
LIMD2-201ENST00000259006 FMR1NBQ8N0W7 255 aaPredicted RBP16.02■□□□□ 0.16
LIMD2-201ENST00000259006 ADGRL3Q9HAR2 1447 aa16.02■□□□□ 0.16
LIMD2-201ENST00000259006 ZNF202O95125 648 aa16.02■□□□□ 0.15
LIMD2-201ENST00000259006 CAVIN2O95810 425 aa16.02■□□□□ 0.15
LIMD2-201ENST00000259006 PDIA3P30101 505 aaKnown RBP16.02■□□□□ 0.15
LIMD2-201ENST00000259006 FANCCQ00597 558 aa16.02■□□□□ 0.15
LIMD2-201ENST00000259006 WASHC4Q2M389 1173 aa16.02■□□□□ 0.15
LIMD2-201ENST00000259006 SYNE3Q6ZMZ3 975 aa16.02■□□□□ 0.15
LIMD2-201ENST00000259006 C8orf76Q96K31 380 aa16.02■□□□□ 0.15
LIMD2-201ENST00000259006 E7EWF7 191 aa16.01■□□□□ 0.15
LIMD2-201ENST00000259006 NRDCO43847 1150 aa16.01■□□□□ 0.15
LIMD2-201ENST00000259006 CHRNA2Q15822 529 aa16.01■□□□□ 0.15
LIMD2-201ENST00000259006 ZNF594Q96JF6 807 aaPredicted RBP16.01■□□□□ 0.15
LIMD2-201ENST00000259006 CPLX1O14810 134 aa16.01■□□□□ 0.15
LIMD2-201ENST00000259006 UBASH3AP57075 661 aa16.01■□□□□ 0.15
LIMD2-201ENST00000259006 REXO1L1PQ8IX06 675 aa16.01■□□□□ 0.15
LIMD2-201ENST00000259006 PLEKHA4Q9H4M7 779 aa16.01■□□□□ 0.15
LIMD2-201ENST00000259006 ZNF330Q9Y3S2 320 aaPredicted RBP16.01■□□□□ 0.15
LIMD2-201ENST00000259006 AKAP12Q02952 1782 aa16.01■□□□□ 0.15
LIMD2-201ENST00000259006 A0A087WZG4 1122 aa16.01■□□□□ 0.15
LIMD2-201ENST00000259006 NEURL1BA8MQ27 555 aa16.01■□□□□ 0.15
LIMD2-201ENST00000259006 H0YHG0 523 aa16.01■□□□□ 0.15
LIMD2-201ENST00000259006 FDPSP14324 419 aaKnown RBP16.01■□□□□ 0.15
LIMD2-201ENST00000259006 ACTN2P35609 894 aa16.01■□□□□ 0.15
LIMD2-201ENST00000259006 SARNPP82979 210 aaKnown RBP16.01■□□□□ 0.15
LIMD2-201ENST00000259006 GCKRQ14397 625 aa16.01■□□□□ 0.15
LIMD2-201ENST00000259006 MICALL1Q8N3F8 863 aa16.01■□□□□ 0.15
LIMD2-201ENST00000259006 SMARCC2Q8TAQ2 1214 aa16.01■□□□□ 0.15
LIMD2-201ENST00000259006 PXDNLA1KZ92 1463 aa16.01■□□□□ 0.15
LIMD2-201ENST00000259006 SPTLC2O15270 562 aa16■□□□□ 0.15
LIMD2-201ENST00000259006 ECM2O94769 699 aaPredicted RBP16■□□□□ 0.15
LIMD2-201ENST00000259006 GCP02774 474 aa16■□□□□ 0.15
LIMD2-201ENST00000259006 AKAP4Q5JQC9 854 aa16■□□□□ 0.15
LIMD2-201ENST00000259006 LMBR1LQ6UX01 489 aa16■□□□□ 0.15
LIMD2-201ENST00000259006 FANCGO15287 622 aa16■□□□□ 0.15
LIMD2-201ENST00000259006 EVCP57679 992 aa16■□□□□ 0.15
LIMD2-201ENST00000259006 PTPN12Q05209 780 aaKnown RBP16■□□□□ 0.15
LIMD2-201ENST00000259006 PNOCQ13519 176 aa16■□□□□ 0.15
LIMD2-201ENST00000259006 KARSQ15046 597 aaKnown RBP16■□□□□ 0.15
LIMD2-201ENST00000259006 MAP9Q49MG5 647 aa16■□□□□ 0.15
LIMD2-201ENST00000259006 DESI2Q9BSY9 194 aa16■□□□□ 0.15
LIMD2-201ENST00000259006 ORC3Q9UBD5 711 aaPredicted RBP16■□□□□ 0.15
LIMD2-201ENST00000259006 RGPD1P0DJD0 1748 aa16■□□□□ 0.15
LIMD2-201ENST00000259006 GNG11P61952 73 aa15.99■□□□□ 0.15
LIMD2-201ENST00000259006 SMC1AQ14683 1233 aaKnown RBP15.99■□□□□ 0.15
LIMD2-201ENST00000259006 NAIF1Q69YI7 327 aaPredicted RBP15.99■□□□□ 0.15
LIMD2-201ENST00000259006 NAA16Q6N069 864 aaPredicted RBP15.99■□□□□ 0.15
LIMD2-201ENST00000259006 CLIC6Q96NY7 704 aa15.99■□□□□ 0.15
LIMD2-201ENST00000259006 ATP5JP18859 108 aa15.99■□□□□ 0.15
LIMD2-201ENST00000259006 ETF1P62495 437 aaKnown RBP15.99■□□□□ 0.15
LIMD2-201ENST00000259006 SWT1Q5T5J6 900 aaKnown RBP15.99■□□□□ 0.15
LIMD2-201ENST00000259006 ARGLU1Q9NWB6 273 aaPredicted RBP15.99■□□□□ 0.15
LIMD2-201ENST00000259006 ADAM21Q9UKJ8 722 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms