RNA–Protein interactions for RNA: ENST00000256552.10

TRPM1-201, Transcript of transient receptor potential cation channel subfamily M member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRPM1, Length 5,514 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM1-201ENST00000256552 AIDAQ96BJ3 306 aa11.52□□□□□ -0.57
TRPM1-201ENST00000256552 C8orf74Q6P047 294 aa11.51□□□□□ -0.57
TRPM1-201ENST00000256552 ZNF365Q70YC5 407 aa11.51□□□□□ -0.57
TRPM1-201ENST00000256552 SEC62Q99442 399 aaKnown RBP11.51□□□□□ -0.57
TRPM1-201ENST00000256552 POLKQ9UBT6 870 aa11.51□□□□□ -0.57
TRPM1-201ENST00000256552 LRRD1A4D1F6 860 aa11.51□□□□□ -0.57
TRPM1-201ENST00000256552 FAM43BQ6ZT52 329 aaPredicted RBP11.51□□□□□ -0.57
TRPM1-201ENST00000256552 ANKRD24Q8TF21 1146 aa11.51□□□□□ -0.57
TRPM1-201ENST00000256552 DHX58Q96C10 678 aa11.51□□□□□ -0.57
TRPM1-201ENST00000256552 SELENOOQ9BVL4 669 aa11.51□□□□□ -0.57
TRPM1-201ENST00000256552 TTC19Q6DKK2 380 aaPredicted RBP11.51□□□□□ -0.57
TRPM1-201ENST00000256552 SUGP1Q8IWZ8 645 aaKnown RBP11.51□□□□□ -0.57
TRPM1-201ENST00000256552 CCDC110Q8TBZ0 833 aa11.51□□□□□ -0.57
TRPM1-201ENST00000256552 DESI2Q9BSY9 194 aa11.51□□□□□ -0.57
TRPM1-201ENST00000256552 HOMER2Q9NSB8 354 aa11.51□□□□□ -0.57
TRPM1-201ENST00000256552 RMND1Q9NWS8 449 aa11.51□□□□□ -0.57
TRPM1-201ENST00000256552 RABGAP1Q9Y3P9 1069 aa11.51□□□□□ -0.57
TRPM1-201ENST00000256552 A0A1W2PRG0 241 aa11.51□□□□□ -0.57
TRPM1-201ENST00000256552 ADKP55263 362 aaKnown RBP11.51□□□□□ -0.57
TRPM1-201ENST00000256552 NAIF1Q69YI7 327 aaPredicted RBP11.51□□□□□ -0.57
TRPM1-201ENST00000256552 RAPGEF4Q8WZA2 1011 aa11.51□□□□□ -0.57
TRPM1-201ENST00000256552 PPANQ9NQ55 473 aaKnown RBP11.51□□□□□ -0.57
TRPM1-201ENST00000256552 BSDC1Q9NW68 430 aaPredicted RBP11.51□□□□□ -0.57
TRPM1-201ENST00000256552 HMGB1P1B2RPK0 211 aaPredicted RBP11.5□□□□□ -0.57
TRPM1-201ENST00000256552 IFIT3O14879 490 aaKnown RBP11.5□□□□□ -0.57
TRPM1-201ENST00000256552 PFDN1O60925 122 aa11.5□□□□□ -0.57
TRPM1-201ENST00000256552 CCT6AP40227 531 aaKnown RBP11.5□□□□□ -0.57
TRPM1-201ENST00000256552 CYP26C1Q6V0L0 522 aa11.5□□□□□ -0.57
TRPM1-201ENST00000256552 SMARCC2Q8TAQ2 1214 aa11.5□□□□□ -0.57
TRPM1-201ENST00000256552 CEP104O60308 925 aa11.5□□□□□ -0.57
TRPM1-201ENST00000256552 ATP1A2P50993 1020 aa11.5□□□□□ -0.57
TRPM1-201ENST00000256552 CACNA2D3Q8IZS8 1091 aa11.5□□□□□ -0.57
TRPM1-201ENST00000256552 WHAMMQ8TF30 809 aa11.5□□□□□ -0.57
TRPM1-201ENST00000256552 TBC1D22AQ8WUA7 517 aa11.5□□□□□ -0.57
TRPM1-201ENST00000256552 CTNNBL1Q8WYA6 563 aaPredicted RBP11.5□□□□□ -0.57
TRPM1-201ENST00000256552 ETAA1Q9NY74 926 aa11.5□□□□□ -0.57
TRPM1-201ENST00000256552 PALD1Q9ULE6 856 aa11.5□□□□□ -0.57
TRPM1-201ENST00000256552 ADGRF5Q8IZF2 1346 aa11.5□□□□□ -0.57
TRPM1-201ENST00000256552 CREB3O43889 395 aa11.5□□□□□ -0.57
TRPM1-201ENST00000256552 GBP1P32455 592 aa11.5□□□□□ -0.57
TRPM1-201ENST00000256552 RFC1P35251 1148 aaPredicted RBP11.5□□□□□ -0.57
TRPM1-201ENST00000256552 CCDC92Q53HC0 331 aaPredicted RBP11.5□□□□□ -0.57
TRPM1-201ENST00000256552 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.5□□□□□ -0.57
TRPM1-201ENST00000256552 ZNF692Q9BU19 519 aaPredicted RBP11.5□□□□□ -0.57
TRPM1-201ENST00000256552 PSEN1P49768 467 aa11.5□□□□□ -0.57
TRPM1-201ENST00000256552 IFI16Q16666 785 aaKnown RBP11.5□□□□□ -0.57
TRPM1-201ENST00000256552 NCOA7Q8NI08 942 aa11.5□□□□□ -0.57
TRPM1-201ENST00000256552 DDX27Q96GQ7 796 aaKnown RBP11.5□□□□□ -0.57
TRPM1-201ENST00000256552 ST7Q9NRC1 585 aa11.5□□□□□ -0.57
TRPM1-201ENST00000256552 KCNG1Q9UIX4 513 aa11.5□□□□□ -0.57
TRPM1-201ENST00000256552 MTMR6Q9Y217 621 aa11.5□□□□□ -0.57
TRPM1-201ENST00000256552 SAMM50Q9Y512 469 aa11.5□□□□□ -0.57
TRPM1-201ENST00000256552 GOLGA8KD6RF30 607 aa11.49□□□□□ -0.57
TRPM1-201ENST00000256552 RNF40O75150 1001 aa11.49□□□□□ -0.57
TRPM1-201ENST00000256552 SF3A3Q12874 501 aaKnown RBP eCLIP11.49□□□□□ -0.57
TRPM1-201ENST00000256552 ZNF530Q6P9A1 599 aaPredicted RBP11.49□□□□□ -0.57
TRPM1-201ENST00000256552 ZMAT2Q96NC0 199 aaKnown RBP11.49□□□□□ -0.57
TRPM1-201ENST00000256552 TSC22D3Q99576 134 aa11.49□□□□□ -0.57
TRPM1-201ENST00000256552 PARD6BQ9BYG5 372 aa11.49□□□□□ -0.57
TRPM1-201ENST00000256552 E2F5Q15329 346 aa11.49□□□□□ -0.57
TRPM1-201ENST00000256552 TMEM132AQ24JP5 1023 aa11.49□□□□□ -0.57
TRPM1-201ENST00000256552 BRAPQ7Z569 592 aa11.49□□□□□ -0.57
TRPM1-201ENST00000256552 TRIM7Q9C029 511 aa11.49□□□□□ -0.57
TRPM1-201ENST00000256552 TTC41PQ6P2S7 1318 aa11.49□□□□□ -0.57
TRPM1-201ENST00000256552 CASQ2O14958 399 aaPredicted RBP11.49□□□□□ -0.57
TRPM1-201ENST00000256552 RPS6KB1P23443 525 aa11.49□□□□□ -0.57
TRPM1-201ENST00000256552 TNNC1P63316 161 aa11.49□□□□□ -0.57
TRPM1-201ENST00000256552 MAP3K9P80192 1104 aa11.49□□□□□ -0.57
TRPM1-201ENST00000256552 CRYMQ14894 314 aa11.49□□□□□ -0.57
TRPM1-201ENST00000256552 SETDB1Q15047 1291 aa11.49□□□□□ -0.57
TRPM1-201ENST00000256552 CCDC40Q4G0X9 1142 aa11.49□□□□□ -0.57
TRPM1-201ENST00000256552 TTC6Q86TZ1 520 aa11.49□□□□□ -0.57
TRPM1-201ENST00000256552 PYM1Q9BRP8 204 aaKnown RBP11.49□□□□□ -0.57
TRPM1-201ENST00000256552 PSD3Q9NYI0 1048 aa11.49□□□□□ -0.57
TRPM1-201ENST00000256552 RTEL1-TNFRSF6BF6WH68 1400 aa11.49□□□□□ -0.57
TRPM1-201ENST00000256552 SPDL1Q96EA4 605 aa11.49□□□□□ -0.57
TRPM1-201ENST00000256552 PHLPP2Q6ZVD8 1323 aa11.49□□□□□ -0.57
TRPM1-201ENST00000256552 MSH6P52701 1360 aa11.49□□□□□ -0.57
TRPM1-201ENST00000256552 TSNAXIP1Q2TAA8 658 aa11.49□□□□□ -0.57
TRPM1-201ENST00000256552 IFT20Q8IY31 132 aa11.49□□□□□ -0.57
TRPM1-201ENST00000256552 ZC3H6P61129 1189 aaKnown RBP11.48□□□□□ -0.57
TRPM1-201ENST00000256552 CCDC174Q6PII3 467 aa11.48□□□□□ -0.57
TRPM1-201ENST00000256552 TSGA10Q9BZW7 698 aa11.48□□□□□ -0.57
TRPM1-201ENST00000256552 DNAI2Q9GZS0 605 aa11.48□□□□□ -0.57
TRPM1-201ENST00000256552 COL17A1Q9UMD9 1497 aaPredicted RBP11.48□□□□□ -0.57
TRPM1-201ENST00000256552 ZNF202O95125 648 aa11.48□□□□□ -0.57
TRPM1-201ENST00000256552 CORO7P57737 925 aa11.48□□□□□ -0.57
TRPM1-201ENST00000256552 PPP1R7Q15435 360 aa11.48□□□□□ -0.57
TRPM1-201ENST00000256552 TMEM67Q5HYA8 995 aa11.48□□□□□ -0.57
TRPM1-201ENST00000256552 CHST3Q7LGC8 479 aa11.48□□□□□ -0.57
TRPM1-201ENST00000256552 SERPINA10Q9UK55 444 aa11.48□□□□□ -0.57
TRPM1-201ENST00000256552 SLMAPQ14BN4 828 aa11.48□□□□□ -0.57
TRPM1-201ENST00000256552 SRGAP1Q7Z6B7 1085 aa11.48□□□□□ -0.57
TRPM1-201ENST00000256552 NME9Q86XW9 330 aa11.48□□□□□ -0.57
TRPM1-201ENST00000256552 JAKMIP2Q96AA8 810 aa11.48□□□□□ -0.57
TRPM1-201ENST00000256552 CARD14Q9BXL6 1004 aa11.48□□□□□ -0.57
TRPM1-201ENST00000256552 SGSM2O43147 1006 aa11.48□□□□□ -0.57
TRPM1-201ENST00000256552 TRIM68Q6AZZ1 485 aa11.48□□□□□ -0.57
TRPM1-201ENST00000256552 TMTC1Q8IUR5 882 aa11.48□□□□□ -0.57
TRPM1-201ENST00000256552 TRMT2AQ8IZ69 625 aaKnown RBP11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms