RNA–Protein interactions for RNA: ENST00000255266.9

PDE6A-201, Transcript of phosphodiesterase 6A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDE6A, Length 5,642 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6A-201ENST00000255266 HOMER1Q86YM7 354 aa10.62□□□□□ -0.71
PDE6A-201ENST00000255266 SPATA32Q96LK8 384 aa10.62□□□□□ -0.71
PDE6A-201ENST00000255266 ARHGAP23Q9P227 1491 aa10.62□□□□□ -0.71
PDE6A-201ENST00000255266 IBTKQ9P2D0 1353 aaPredicted RBP10.62□□□□□ -0.71
PDE6A-201ENST00000255266 USP17L3A6NCW0 530 aa10.62□□□□□ -0.71
PDE6A-201ENST00000255266 USP17L4A6NCW7 530 aa10.62□□□□□ -0.71
PDE6A-201ENST00000255266 DOK7Q18PE1 504 aa10.62□□□□□ -0.71
PDE6A-201ENST00000255266 USP17L1Q7RTZ2 530 aa10.62□□□□□ -0.71
PDE6A-201ENST00000255266 PDE4CQ08493 712 aa10.61□□□□□ -0.71
PDE6A-201ENST00000255266 ZNHIT6Q9NWK9 470 aaKnown RBP10.61□□□□□ -0.71
PDE6A-201ENST00000255266 JAG2Q9Y219 1238 aa10.61□□□□□ -0.71
PDE6A-201ENST00000255266 NOD1Q9Y239 953 aa10.61□□□□□ -0.71
PDE6A-201ENST00000255266 A0A0U1RQG5 324 aaPredicted RBP10.61□□□□□ -0.71
PDE6A-201ENST00000255266 HEATR3Q7Z4Q2 680 aa10.61□□□□□ -0.71
PDE6A-201ENST00000255266 CHURC1Q8WUH1 139 aa10.61□□□□□ -0.71
PDE6A-201ENST00000255266 RNF181Q9P0P0 153 aa10.61□□□□□ -0.71
PDE6A-201ENST00000255266 ZFYVE27Q5T4F4 411 aa10.61□□□□□ -0.71
PDE6A-201ENST00000255266 MCTP2Q6DN12 878 aa10.61□□□□□ -0.71
PDE6A-201ENST00000255266 SLC26A6Q9BXS9 759 aa10.61□□□□□ -0.71
PDE6A-201ENST00000255266 CD163L1Q9NR16 1453 aa10.61□□□□□ -0.71
PDE6A-201ENST00000255266 KCNQ3O43525 872 aa10.61□□□□□ -0.71
PDE6A-201ENST00000255266 NMIQ13287 307 aaPredicted RBP10.61□□□□□ -0.71
PDE6A-201ENST00000255266 USP37Q86T82 979 aa10.61□□□□□ -0.71
PDE6A-201ENST00000255266 MICU3Q86XE3 530 aa10.61□□□□□ -0.71
PDE6A-201ENST00000255266 CYP27B1O15528 508 aa10.61□□□□□ -0.71
PDE6A-201ENST00000255266 KIF4AO95239 1232 aa10.61□□□□□ -0.71
PDE6A-201ENST00000255266 ZNF594Q96JF6 807 aaPredicted RBP10.61□□□□□ -0.71
PDE6A-201ENST00000255266 SWAP70Q9UH65 585 aa10.61□□□□□ -0.71
PDE6A-201ENST00000255266 NAP1L1P55209 391 aaKnown RBP10.6□□□□□ -0.71
PDE6A-201ENST00000255266 GPR108Q9NPR9 543 aa10.6□□□□□ -0.71
PDE6A-201ENST00000255266 SRP68Q9UHB9 627 aaKnown RBP10.6□□□□□ -0.71
PDE6A-201ENST00000255266 SDSP20132 328 aa10.6□□□□□ -0.71
PDE6A-201ENST00000255266 CEBPZQ03701 1054 aaKnown RBP10.6□□□□□ -0.71
PDE6A-201ENST00000255266 CCDC173Q0VFZ6 552 aa10.6□□□□□ -0.71
PDE6A-201ENST00000255266 VWDEQ8N2E2 1590 aa10.6□□□□□ -0.71
PDE6A-201ENST00000255266 IQSEC2Q5JU85 1478 aa10.6□□□□□ -0.71
PDE6A-201ENST00000255266 C3P01024 1663 aa10.6□□□□□ -0.71
PDE6A-201ENST00000255266 PSDA5PKW4 1024 aaPredicted RBP10.6□□□□□ -0.71
PDE6A-201ENST00000255266 ANAPC15P60006 121 aa10.6□□□□□ -0.71
PDE6A-201ENST00000255266 PRKG1Q13976 671 aa10.6□□□□□ -0.71
PDE6A-201ENST00000255266 NLRP10Q86W26 655 aa10.6□□□□□ -0.71
PDE6A-201ENST00000255266 DDX11Q96FC9 970 aa10.6□□□□□ -0.71
PDE6A-201ENST00000255266 BRIP1Q9BX63 1249 aa10.6□□□□□ -0.71
PDE6A-201ENST00000255266 KLF18A0A0U1RQI7 1052 aa10.6□□□□□ -0.71
PDE6A-201ENST00000255266 GADL1Q6ZQY3 521 aa10.6□□□□□ -0.71
PDE6A-201ENST00000255266 APOBEC3FQ8IUX4 373 aaKnown RBP10.6□□□□□ -0.71
PDE6A-201ENST00000255266 AATFQ9NY61 560 aaKnown RBP eCLIP10.6□□□□□ -0.71
PDE6A-201ENST00000255266 CIZ1Q9ULV3 898 aaPredicted RBP10.6□□□□□ -0.71
PDE6A-201ENST00000255266 PPP2R5BQ15173 497 aa10.59□□□□□ -0.71
PDE6A-201ENST00000255266 CCDC83Q8IWF9 413 aa10.59□□□□□ -0.71
PDE6A-201ENST00000255266 USP32Q8NFA0 1604 aa10.59□□□□□ -0.71
PDE6A-201ENST00000255266 CBFA2T2O43439 604 aa10.59□□□□□ -0.71
PDE6A-201ENST00000255266 TBCAO75347 108 aaKnown RBP10.59□□□□□ -0.71
PDE6A-201ENST00000255266 ARHGEF1Q92888 912 aaKnown RBP10.59□□□□□ -0.71
PDE6A-201ENST00000255266 CETN1Q12798 172 aa10.59□□□□□ -0.71
PDE6A-201ENST00000255266 ZNF526Q8TF50 670 aaPredicted RBP10.59□□□□□ -0.71
PDE6A-201ENST00000255266 TMEM87BQ96K49 555 aa10.59□□□□□ -0.71
PDE6A-201ENST00000255266 PLEKHF1Q96S99 279 aa10.59□□□□□ -0.71
PDE6A-201ENST00000255266 SLC15A2Q16348 729 aa10.59□□□□□ -0.71
PDE6A-201ENST00000255266 GTPBP4Q9BZE4 634 aaKnown RBP10.59□□□□□ -0.71
PDE6A-201ENST00000255266 BSDC1Q9NW68 430 aaPredicted RBP10.59□□□□□ -0.71
PDE6A-201ENST00000255266 ORC3Q9UBD5 711 aaPredicted RBP10.59□□□□□ -0.71
PDE6A-201ENST00000255266 PRC1O43663 620 aa10.59□□□□□ -0.71
PDE6A-201ENST00000255266 FERMT2Q96AC1 680 aa10.59□□□□□ -0.71
PDE6A-201ENST00000255266 AXIN2Q9Y2T1 843 aa10.59□□□□□ -0.71
PDE6A-201ENST00000255266 CNTNAP4Q9C0A0 1308 aa10.59□□□□□ -0.71
PDE6A-201ENST00000255266 TCP10L2B9ZVM9 353 aa10.58□□□□□ -0.72
PDE6A-201ENST00000255266 PNMA3Q9UL41 463 aa10.58□□□□□ -0.72
PDE6A-201ENST00000255266 RBM8AQ9Y5S9 174 aaKnown RBP10.58□□□□□ -0.72
PDE6A-201ENST00000255266 CYP19A1P11511 503 aaPredicted RBP10.58□□□□□ -0.72
PDE6A-201ENST00000255266 FIBPO43427 364 aa10.58□□□□□ -0.72
PDE6A-201ENST00000255266 PCP11498 1178 aaKnown RBP10.58□□□□□ -0.72
PDE6A-201ENST00000255266 KANK3Q6NY19 840 aa10.58□□□□□ -0.72
PDE6A-201ENST00000255266 KIAA0825Q8IV33 1275 aa10.58□□□□□ -0.72
PDE6A-201ENST00000255266 TGFBRAP1Q8WUH2 860 aa10.58□□□□□ -0.72
PDE6A-201ENST00000255266 ARMT1Q9H993 441 aa10.58□□□□□ -0.72
PDE6A-201ENST00000255266 TCP10Q12799 353 aa10.58□□□□□ -0.72
PDE6A-201ENST00000255266 SCAND2PQ9GZW5 306 aaPredicted RBP10.58□□□□□ -0.72
PDE6A-201ENST00000255266 MYO6Q9UM54 1294 aa10.58□□□□□ -0.72
PDE6A-201ENST00000255266 BEND3Q5T5X7 828 aa10.57□□□□□ -0.72
PDE6A-201ENST00000255266 SYNE4Q8N205 404 aa10.57□□□□□ -0.72
PDE6A-201ENST00000255266 CCDC82Q8N4S0 544 aa10.57□□□□□ -0.72
PDE6A-201ENST00000255266 MTFR1LQ9H019 292 aa10.57□□□□□ -0.72
PDE6A-201ENST00000255266 DHX36Q9H2U1 1008 aaKnown RBP10.57□□□□□ -0.72
PDE6A-201ENST00000255266 C21orf2O43822 256 aa10.57□□□□□ -0.72
PDE6A-201ENST00000255266 ZEB2O60315 1214 aa10.57□□□□□ -0.72
PDE6A-201ENST00000255266 NT5C2P49902 561 aa10.57□□□□□ -0.72
PDE6A-201ENST00000255266 CCDC17Q96LX7 622 aa10.57□□□□□ -0.72
PDE6A-201ENST00000255266 ESYT1Q9BSJ8 1104 aa10.57□□□□□ -0.72
PDE6A-201ENST00000255266 ZBTB40Q9NUA8 1239 aa10.57□□□□□ -0.72
PDE6A-201ENST00000255266 CCP110O43303 1012 aa10.57□□□□□ -0.72
PDE6A-201ENST00000255266 BTDP43251 543 aa10.57□□□□□ -0.72
PDE6A-201ENST00000255266 RBM25P49756 843 aaKnown RBP10.57□□□□□ -0.72
PDE6A-201ENST00000255266 TIMM10P62072 90 aa10.57□□□□□ -0.72
PDE6A-201ENST00000255266 SMTNL1A8MU46 457 aa10.57□□□□□ -0.72
PDE6A-201ENST00000255266 M0QZ92 97 aa10.57□□□□□ -0.72
PDE6A-201ENST00000255266 LPXNO60711 386 aa10.57□□□□□ -0.72
PDE6A-201ENST00000255266 STYK1Q6J9G0 422 aa10.57□□□□□ -0.72
PDE6A-201ENST00000255266 CDHR2Q9BYE9 1310 aa10.57□□□□□ -0.72
PDE6A-201ENST00000255266 DEKP35659 375 aaKnown RBP10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 126 ms