RNA–Protein interactions for RNA: ENST00000253193.8

LRP3-201, Transcript of LDL receptor related protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRP3, Length 3,807 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP3-201ENST00000253193 SLC12A7Q9Y666 1083 aa21.36■■□□□ 1.01
LRP3-201ENST00000253193 IRS4O14654 1257 aaPredicted RBP21.35■■□□□ 1.01
LRP3-201ENST00000253193 ZBTB43O43298 467 aa21.35■■□□□ 1.01
LRP3-201ENST00000253193 SPECC1Q5M775 1068 aa21.35■■□□□ 1.01
LRP3-201ENST00000253193 IQSEC3Q9UPP2 1182 aaPredicted RBP21.35■■□□□ 1.01
LRP3-201ENST00000253193 OVOS2A0A0G2JMS6 1433 aa21.35■■□□□ 1.01
LRP3-201ENST00000253193 USP27XA6NNY8 438 aa21.35■■□□□ 1.01
LRP3-201ENST00000253193 FDPSP14324 419 aaKnown RBP21.35■■□□□ 1.01
LRP3-201ENST00000253193 IQCB1Q15051 598 aa21.35■■□□□ 1.01
LRP3-201ENST00000253193 ZKSCAN3Q9BRR0 538 aa21.35■■□□□ 1.01
LRP3-201ENST00000253193 RGPD2P0DJD1 1756 aa21.34■■□□□ 1.01
LRP3-201ENST00000253193 XPO4Q9C0E2 1151 aaKnown RBP21.34■■□□□ 1.01
LRP3-201ENST00000253193 RTEL1Q9NZ71 1219 aa21.34■■□□□ 1.01
LRP3-201ENST00000253193 CIAO1O76071 339 aa21.34■■□□□ 1.01
LRP3-201ENST00000253193 AKAP17AQ02040 695 aaKnown RBP21.34■■□□□ 1.01
LRP3-201ENST00000253193 BRAPQ7Z569 592 aa21.34■■□□□ 1.01
LRP3-201ENST00000253193 ANGEL1Q9UNK9 670 aaKnown RBP21.34■■□□□ 1.01
LRP3-201ENST00000253193 SNW1Q13573 536 aaKnown RBP21.34■■□□□ 1.01
LRP3-201ENST00000253193 CNNM3Q8NE01 707 aa21.34■■□□□ 1.01
LRP3-201ENST00000253193 MRFAP1L1Q96HT8 127 aa21.34■■□□□ 1.01
LRP3-201ENST00000253193 GSDMDP57764 484 aa21.33■■□□□ 1.01
LRP3-201ENST00000253193 INCENPQ9NQS7 918 aa21.33■■□□□ 1.01
LRP3-201ENST00000253193 CTIFO43310 598 aaKnown RBP21.33■■□□□ 1.01
LRP3-201ENST00000253193 PTPN21Q16825 1174 aa21.33■■□□□ 1.01
LRP3-201ENST00000253193 ABCF2Q9UG63 623 aa21.33■■□□□ 1.01
LRP3-201ENST00000253193 DENND2AQ9ULE3 1009 aa21.33■■□□□ 1.01
LRP3-201ENST00000253193 ZNF532Q9HCE3 1301 aa21.33■■□□□ 1
LRP3-201ENST00000253193 PFKFB1P16118 471 aa21.33■■□□□ 1
LRP3-201ENST00000253193 PALLDQ8WX93 1383 aa21.32■■□□□ 1
LRP3-201ENST00000253193 MINDY4BA8MYZ0 360 aa21.32■■□□□ 1
LRP3-201ENST00000253193 RBM43Q6ZSC3 357 aaKnown RBP21.32■■□□□ 1
LRP3-201ENST00000253193 KLHL34Q8N239 644 aa21.32■■□□□ 1
LRP3-201ENST00000253193 LRP2BPQ9P2M1 347 aa21.32■■□□□ 1
LRP3-201ENST00000253193 SNAP23O00161 211 aa21.32■■□□□ 1
LRP3-201ENST00000253193 SART3Q15020 963 aaKnown RBP21.32■■□□□ 1
LRP3-201ENST00000253193 TTF1Q15361 905 aaPredicted RBP21.32■■□□□ 1
LRP3-201ENST00000253193 KRT40Q6A162 431 aa21.32■■□□□ 1
LRP3-201ENST00000253193 ZNF771Q7L3S4 317 aaPredicted RBP21.32■■□□□ 1
LRP3-201ENST00000253193 VPS37DQ86XT2 251 aa21.32■■□□□ 1
LRP3-201ENST00000253193 TRIM22Q8IYM9 498 aa21.32■■□□□ 1
LRP3-201ENST00000253193 RFX7Q2KHR2 1363 aa21.31■■□□□ 1
LRP3-201ENST00000253193 CTDSPL2Q05D32 466 aa21.31■■□□□ 1
LRP3-201ENST00000253193 UTP14CQ5TAP6 766 aaKnown RBP21.31■■□□□ 1
LRP3-201ENST00000253193 FMR1NBQ8N0W7 255 aaPredicted RBP21.31■■□□□ 1
LRP3-201ENST00000253193 MAGEB6Q8N7X4 407 aa21.31■■□□□ 1
LRP3-201ENST00000253193 CLIC6Q96NY7 704 aa21.31■■□□□ 1
LRP3-201ENST00000253193 MCAMP43121 646 aa21.31■■□□□ 1
LRP3-201ENST00000253193 UBASH3AP57075 661 aa21.31■■□□□ 1
LRP3-201ENST00000253193 DHX40Q8IX18 779 aaKnown RBP21.31■■□□□ 1
LRP3-201ENST00000253193 TMX1Q9H3N1 280 aa21.31■■□□□ 1
LRP3-201ENST00000253193 A0A0U1RQG5 324 aaPredicted RBP21.3■■□□□ 1
LRP3-201ENST00000253193 PHKA1P46020 1223 aa21.3■■□□□ 1
LRP3-201ENST00000253193 SSRP1Q08945 709 aaKnown RBP21.3■■□□□ 1
LRP3-201ENST00000253193 MAP3K12Q12852 859 aa21.3■■□□□ 1
LRP3-201ENST00000253193 HLFQ16534 295 aa21.3■■□□□ 1
LRP3-201ENST00000253193 ZBTB38Q8NAP3 1195 aaPredicted RBP21.3■■□□□ 1
LRP3-201ENST00000253193 WDR17Q8IZU2 1322 aa21.3■■□□□ 1
LRP3-201ENST00000253193 YEATS4O95619 227 aa21.3■■□□□ 1
LRP3-201ENST00000253193 CCAR2Q8N163 923 aaKnown RBP21.3■■□□□ 1
LRP3-201ENST00000253193 SPATA31A3Q5VYP0 1347 aa21.3■■□□□ 1
LRP3-201ENST00000253193 CMTR1Q8N1G2 835 aaKnown RBP21.3■■□□□ 1
LRP3-201ENST00000253193 MIGA1Q8NAN2 632 aa21.3■■□□□ 1
LRP3-201ENST00000253193 PCCAP05165 728 aaPredicted RBP21.29■■□□□ 1
LRP3-201ENST00000253193 TEX13AQ9BXU3 409 aaPredicted RBP21.29■■□□□ 1
LRP3-201ENST00000253193 MED1Q15648 1581 aaPredicted RBP21.29■■□□□ 1
LRP3-201ENST00000253193 KIF28PB7ZC32 967 aa21.29■■□□□ 1
LRP3-201ENST00000253193 MBD4O95243 580 aa21.29■■□□□ 1
LRP3-201ENST00000253193 SYT10Q6XYQ8 523 aa21.29■■□□□ 1
LRP3-201ENST00000253193 NACAP1Q9BZK3 213 aa21.29■■□□□ 1
LRP3-201ENST00000253193 HOOK1Q9UJC3 728 aaKnown RBP21.29■■□□□ 1
LRP3-201ENST00000253193 PNOCQ13519 176 aa21.29■■□□□ 1
LRP3-201ENST00000253193 CCDC102BQ68D86 513 aa21.29■■□□□ 1
LRP3-201ENST00000253193 ARMT1Q9H993 441 aa21.29■■□□□ 1
LRP3-201ENST00000253193 ATG3Q9NT62 314 aa21.29■■□□□ 1
LRP3-201ENST00000253193 KIF23Q02241 960 aaPredicted RBP21.28■■□□□ 1
LRP3-201ENST00000253193 GTF2E1P29083 439 aaPredicted RBP21.28■■□□□ 1
LRP3-201ENST00000253193 MFSD6Q6ZSS7 791 aa21.28■■□□□ 1
LRP3-201ENST00000253193 ILDR1Q86SU0 546 aaPredicted RBP21.28■■□□□ 1
LRP3-201ENST00000253193 ENGASEQ8NFI3 743 aa21.28■■□□□ 1
LRP3-201ENST00000253193 ZNF215Q9UL58 517 aaPredicted RBP21.28■■□□□ 1
LRP3-201ENST00000253193 MB21D2Q8IYB1 491 aaPredicted RBP21.28■■□□□ 1
LRP3-201ENST00000253193 MNS1Q8NEH6 495 aa21.28■■□□□ 1
LRP3-201ENST00000253193 WWC3Q9ULE0 1092 aa21.27■■□□□ 1
LRP3-201ENST00000253193 A0A1W2PQ27 194 aa21.27■■□□□ 1
LRP3-201ENST00000253193 A0A1W2PQ64 194 aa21.27■■□□□ 1
LRP3-201ENST00000253193 A0A1W2PQD8 194 aa21.27■■□□□ 1
LRP3-201ENST00000253193 TOP1P11387 765 aaKnown RBP21.27■■□□□ 1
LRP3-201ENST00000253193 UBAC1Q9BSL1 405 aa21.27■■□□□ 1
LRP3-201ENST00000253193 PIH1D3Q9NQM4 214 aaKnown RBP21.27■■□□□ 1
LRP3-201ENST00000253193 POLR3EQ9NVU0 708 aa21.27■■□□□ 1
LRP3-201ENST00000253193 FANCCQ00597 558 aa21.27■■□□□ 1
LRP3-201ENST00000253193 CGNQ9P2M7 1197 aaKnown RBP21.27■■□□□ 1
LRP3-201ENST00000253193 KCNJ14Q9UNX9 436 aa21.27■■□□□ 1
LRP3-201ENST00000253193 PDE6AP16499 860 aa21.26■□□□□ 0.99
LRP3-201ENST00000253193 CDC25BP30305 580 aa21.26■□□□□ 0.99
LRP3-201ENST00000253193 ANTXR2P58335 489 aa21.26■□□□□ 0.99
LRP3-201ENST00000253193 NLRP12P59046 1061 aa21.26■□□□□ 0.99
LRP3-201ENST00000253193 SARM1Q6SZW1 724 aa21.26■□□□□ 0.99
LRP3-201ENST00000253193 TBC1D10CQ8IV04 446 aa21.26■□□□□ 0.99
LRP3-201ENST00000253193 ISCA1Q9BUE6 129 aa21.26■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms