RNA–Protein interactions for RNA: ENST00000245479.2

SOX9-201, Transcript of SRY-box 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SOX9, Length 3,935 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX9-201ENST00000245479 KIF24Q5T7B8 1368 aa13.27□□□□□ -0.29
SOX9-201ENST00000245479 USP31Q70CQ4 1352 aa13.27□□□□□ -0.29
SOX9-201ENST00000245479 ERICH2A1L162 156 aa13.26□□□□□ -0.29
SOX9-201ENST00000245479 EXOC5O00471 708 aa13.26□□□□□ -0.29
SOX9-201ENST00000245479 KIAA0754O94854 1291 aa13.26□□□□□ -0.29
SOX9-201ENST00000245479 ZNF710Q8N1W2 664 aa13.26□□□□□ -0.29
SOX9-201ENST00000245479 PCMTD1Q96MG8 357 aaPredicted RBP13.26□□□□□ -0.29
SOX9-201ENST00000245479 KCNJ14Q9UNX9 436 aa13.26□□□□□ -0.29
SOX9-201ENST00000245479 SLC3A2P08195 630 aaKnown RBP13.26□□□□□ -0.29
SOX9-201ENST00000245479 ZBTB1Q9Y2K1 713 aa13.26□□□□□ -0.29
SOX9-201ENST00000245479 ATP6V1AP38606 617 aa13.26□□□□□ -0.29
SOX9-201ENST00000245479 DZIP3Q86Y13 1208 aaKnown RBP13.26□□□□□ -0.29
SOX9-201ENST00000245479 CCDC12Q8WUD4 166 aaPredicted RBP13.26□□□□□ -0.29
SOX9-201ENST00000245479 FAM170AA1A519 330 aa13.25□□□□□ -0.29
SOX9-201ENST00000245479 PHACTR2O75167 634 aa13.25□□□□□ -0.29
SOX9-201ENST00000245479 PHKA1P46020 1223 aa13.25□□□□□ -0.29
SOX9-201ENST00000245479 ALG1Q9BT22 464 aa13.25□□□□□ -0.29
SOX9-201ENST00000245479 METAP2P50579 478 aaKnown RBP eCLIP13.25□□□□□ -0.29
SOX9-201ENST00000245479 MNAT1P51948 309 aa13.25□□□□□ -0.29
SOX9-201ENST00000245479 EVCP57679 992 aa13.25□□□□□ -0.29
SOX9-201ENST00000245479 CLIC6Q96NY7 704 aa13.25□□□□□ -0.29
SOX9-201ENST00000245479 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.25□□□□□ -0.29
SOX9-201ENST00000245479 GBP3Q9H0R5 595 aa13.25□□□□□ -0.29
SOX9-201ENST00000245479 IFNKQ9P0W0 207 aa13.25□□□□□ -0.29
SOX9-201ENST00000245479 DDX41Q9UJV9 622 aaKnown RBP13.25□□□□□ -0.29
SOX9-201ENST00000245479 SALL3Q9BXA9 1300 aa13.25□□□□□ -0.29
SOX9-201ENST00000245479 GOLGA8AA7E2F4 631 aa13.25□□□□□ -0.29
SOX9-201ENST00000245479 PRKAB2O43741 272 aa13.25□□□□□ -0.29
SOX9-201ENST00000245479 ATP5JP18859 108 aa13.25□□□□□ -0.29
SOX9-201ENST00000245479 AFMP43652 599 aa13.25□□□□□ -0.29
SOX9-201ENST00000245479 JMYQ8N9B5 988 aa13.25□□□□□ -0.29
SOX9-201ENST00000245479 PLIN2Q99541 437 aa13.25□□□□□ -0.29
SOX9-201ENST00000245479 VPS18Q9P253 973 aa13.25□□□□□ -0.29
SOX9-201ENST00000245479 ADGRB2O60241 1585 aa13.25□□□□□ -0.29
SOX9-201ENST00000245479 IVLP07476 585 aa13.24□□□□□ -0.29
SOX9-201ENST00000245479 ERCC3P19447 782 aa13.24□□□□□ -0.29
SOX9-201ENST00000245479 STX17P56962 302 aa13.24□□□□□ -0.29
SOX9-201ENST00000245479 TTC31Q49AM3 519 aaPredicted RBP13.24□□□□□ -0.29
SOX9-201ENST00000245479 FILIP1LQ4L180 1135 aa13.24□□□□□ -0.29
SOX9-201ENST00000245479 NIP7Q9Y221 180 aaKnown RBP eCLIP13.24□□□□□ -0.297e-10■□□□□ 8.2
SOX9-201ENST00000245479 ZNF827Q17R98 1081 aa13.24□□□□□ -0.29
SOX9-201ENST00000245479 CTR9Q6PD62 1173 aa13.24□□□□□ -0.29
SOX9-201ENST00000245479 CACTINQ8WUQ7 758 aaKnown RBP13.24□□□□□ -0.29
SOX9-201ENST00000245479 SDR42E1Q8WUS8 393 aa13.24□□□□□ -0.29
SOX9-201ENST00000245479 SMARCE1Q969G3 411 aa13.24□□□□□ -0.29
SOX9-201ENST00000245479 CRACR2AQ9BSW2 395 aa13.24□□□□□ -0.29
SOX9-201ENST00000245479 CARD6Q9BX69 1037 aa13.24□□□□□ -0.29
SOX9-201ENST00000245479 SRRTQ9BXP5 876 aaKnown RBP13.24□□□□□ -0.29
SOX9-201ENST00000245479 CENPHQ9H3R5 247 aa13.24□□□□□ -0.29
SOX9-201ENST00000245479 MBD4O95243 580 aa13.24□□□□□ -0.29
SOX9-201ENST00000245479 HOXB7P09629 217 aa13.24□□□□□ -0.29
SOX9-201ENST00000245479 ST3GAL1Q11201 340 aa13.24□□□□□ -0.29
SOX9-201ENST00000245479 ZSCAN26Q16670 478 aa13.24□□□□□ -0.29
SOX9-201ENST00000245479 SLAIN2Q9P270 581 aa13.24□□□□□ -0.29
SOX9-201ENST00000245479 ZNF219Q9P2Y4 722 aaPredicted RBP13.24□□□□□ -0.29
SOX9-201ENST00000245479 CLIC4Q9Y696 253 aa13.24□□□□□ -0.29
SOX9-201ENST00000245479 RPAP1Q9BWH6 1393 aaPredicted RBP13.24□□□□□ -0.29
SOX9-201ENST00000245479 BCAMP50895 628 aa13.23□□□□□ -0.29
SOX9-201ENST00000245479 ATP2B2Q01814 1243 aa13.23□□□□□ -0.29
SOX9-201ENST00000245479 PGBD1Q96JS3 809 aa13.23□□□□□ -0.29
SOX9-201ENST00000245479 SPTLC3Q9NUV7 552 aa13.23□□□□□ -0.29
SOX9-201ENST00000245479 CTNNA3Q9UI47 895 aa13.23□□□□□ -0.29
SOX9-201ENST00000245479 MAST3O60307 1309 aa13.23□□□□□ -0.29
SOX9-201ENST00000245479 ZNF335Q9H4Z2 1342 aaPredicted RBP13.23□□□□□ -0.29
SOX9-201ENST00000245479 KIF5CO60282 957 aa13.23□□□□□ -0.29
SOX9-201ENST00000245479 UBASH3AP57075 661 aa13.23□□□□□ -0.29
SOX9-201ENST00000245479 C11orf57Q6ZUT1 292 aaPredicted RBP13.23□□□□□ -0.29
SOX9-201ENST00000245479 SLC12A7Q9Y666 1083 aa13.23□□□□□ -0.29
SOX9-201ENST00000245479 PXDNQ92626 1479 aa13.23□□□□□ -0.29
SOX9-201ENST00000245479 CYP2D7A0A087X1C5 515 aa13.23□□□□□ -0.29
SOX9-201ENST00000245479 AP5Z1O43299 807 aa13.23□□□□□ -0.29
SOX9-201ENST00000245479 SAFBQ15424 915 aaKnown RBP eCLIP13.23□□□□□ -0.29
SOX9-201ENST00000245479 LRRFIP1Q32MZ4 808 aaKnown RBP13.23□□□□□ -0.29
SOX9-201ENST00000245479 NCOA7Q8NI08 942 aa13.23□□□□□ -0.29
SOX9-201ENST00000245479 SMARCC1Q92922 1105 aaPredicted RBP13.23□□□□□ -0.29
SOX9-201ENST00000245479 TFCP2L1Q9NZI6 479 aa13.23□□□□□ -0.29
SOX9-201ENST00000245479 OAS2P29728 719 aaKnown RBP13.22□□□□□ -0.29
SOX9-201ENST00000245479 UBAC1Q9BSL1 405 aa13.22□□□□□ -0.29
SOX9-201ENST00000245479 CLSTN2Q9H4D0 955 aa13.22□□□□□ -0.29
SOX9-201ENST00000245479 ZSCAN16Q9H4T2 348 aaPredicted RBP13.22□□□□□ -0.29
SOX9-201ENST00000245479 RNF216Q9NWF9 866 aaPredicted RBP13.22□□□□□ -0.29
SOX9-201ENST00000245479 HMG20BQ9P0W2 317 aa13.22□□□□□ -0.29
SOX9-201ENST00000245479 WTIPA6NIX2 430 aaPredicted RBP13.22□□□□□ -0.29
SOX9-201ENST00000245479 EPB41L2O43491 1005 aaKnown RBP13.22□□□□□ -0.29
SOX9-201ENST00000245479 VAT1LQ9HCJ6 419 aa13.22□□□□□ -0.29
SOX9-201ENST00000245479 MAPK8IP1Q9UQF2 711 aa13.22□□□□□ -0.29
SOX9-201ENST00000245479 SLC4A4Q9Y6R1 1079 aa13.22□□□□□ -0.29
SOX9-201ENST00000245479 ZNF532Q9HCE3 1301 aa13.22□□□□□ -0.29
SOX9-201ENST00000245479 IARSP41252 1262 aaKnown RBP13.22□□□□□ -0.29
SOX9-201ENST00000245479 PIGBQ92521 554 aa13.22□□□□□ -0.29
SOX9-201ENST00000245479 COPRSQ9NQ92 184 aa13.22□□□□□ -0.29
SOX9-201ENST00000245479 AKAP2Q9Y2D5 859 aa13.22□□□□□ -0.29
SOX9-201ENST00000245479 NCOA3Q9Y6Q9 1424 aa13.22□□□□□ -0.29
SOX9-201ENST00000245479 BAZ2BQ9UIF8 2168 aaKnown RBP13.22□□□□□ -0.29
SOX9-201ENST00000245479 HNRNPH2P55795 449 aaKnown RBP13.21□□□□□ -0.29
SOX9-201ENST00000245479 FBXO38Q6PIJ6 1188 aa13.21□□□□□ -0.29
SOX9-201ENST00000245479 UTP14AQ9BVJ6 771 aaKnown RBP13.21□□□□□ -0.29
SOX9-201ENST00000245479 SENP2Q9HC62 589 aa13.21□□□□□ -0.29
SOX9-201ENST00000245479 MRVI1Q9Y6F6 885 aa13.21□□□□□ -0.29
SOX9-201ENST00000245479 IRX5P78411 483 aaPredicted RBP13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms