RNA–Protein interactions for RNA: ENST00000244741.9

CDKN1A-201, Transcript of cyclin dependent kinase inhibitor 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDKN1A, Length 2,180 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1A-201ENST00000244741 GRIK5Q16478 980 aa20.26■□□□□ 0.83
CDKN1A-201ENST00000244741 LRP2BPQ9P2M1 347 aa20.26■□□□□ 0.83
CDKN1A-201ENST00000244741 MYH13Q9UKX3 1938 aa20.25■□□□□ 0.83
CDKN1A-201ENST00000244741 COL4A5P29400 1685 aa20.25■□□□□ 0.83
CDKN1A-201ENST00000244741 PRDX5P30044 214 aa20.25■□□□□ 0.83
CDKN1A-201ENST00000244741 ANAPC15P60006 121 aa20.25■□□□□ 0.83
CDKN1A-201ENST00000244741 GRIPAP1Q4V328 841 aa20.25■□□□□ 0.83
CDKN1A-201ENST00000244741 TMX3Q96JJ7 454 aa20.25■□□□□ 0.83
CDKN1A-201ENST00000244741 SEC62Q99442 399 aaKnown RBP20.25■□□□□ 0.83
CDKN1A-201ENST00000244741 DIAPH3Q9NSV4 1193 aa20.25■□□□□ 0.83
CDKN1A-201ENST00000244741 SEMA3EO15041 775 aa20.24■□□□□ 0.83
CDKN1A-201ENST00000244741 IARSP41252 1262 aaKnown RBP20.24■□□□□ 0.83
CDKN1A-201ENST00000244741 NMIQ13287 307 aaPredicted RBP20.24■□□□□ 0.83
CDKN1A-201ENST00000244741 SLC9C2Q5TAH2 1124 aa20.24■□□□□ 0.83
CDKN1A-201ENST00000244741 GAS2L3Q86XJ1 694 aa20.24■□□□□ 0.83
CDKN1A-201ENST00000244741 GRPEL1Q9HAV7 217 aa20.24■□□□□ 0.83
CDKN1A-201ENST00000244741 RAI14Q9P0K7 980 aa20.24■□□□□ 0.83
CDKN1A-201ENST00000244741 ZDHHC9Q9Y397 364 aa20.24■□□□□ 0.83
CDKN1A-201ENST00000244741 FER1L6Q2WGJ9 1857 aa20.24■□□□□ 0.83
CDKN1A-201ENST00000244741 A0A0D9SFI3 127 aa20.24■□□□□ 0.83
CDKN1A-201ENST00000244741 YDJCA8MPS7 323 aa20.24■□□□□ 0.83
CDKN1A-201ENST00000244741 TTLL5Q6EMB2 1281 aa20.24■□□□□ 0.83
CDKN1A-201ENST00000244741 FAM43AQ8N2R8 423 aa20.24■□□□□ 0.83
CDKN1A-201ENST00000244741 TTF1Q15361 905 aaPredicted RBP20.23■□□□□ 0.83
CDKN1A-201ENST00000244741 MCTP1Q6DN14 999 aa20.23■□□□□ 0.83
CDKN1A-201ENST00000244741 ISY1Q9ULR0 285 aaKnown RBP20.23■□□□□ 0.83
CDKN1A-201ENST00000244741 MFSD14BQ5SR56 506 aa20.22■□□□□ 0.83
CDKN1A-201ENST00000244741 MAGEB6Q8N7X4 407 aa20.22■□□□□ 0.83
CDKN1A-201ENST00000244741 IL17RAQ96F46 866 aa20.22■□□□□ 0.83
CDKN1A-201ENST00000244741 SCN9AQ15858 1988 aa20.22■□□□□ 0.83
CDKN1A-201ENST00000244741 ARFGEF1Q9Y6D6 1849 aa20.22■□□□□ 0.83
CDKN1A-201ENST00000244741 F8W031 263 aaPredicted RBP20.22■□□□□ 0.83
CDKN1A-201ENST00000244741 RAD17O75943 681 aa20.22■□□□□ 0.83
CDKN1A-201ENST00000244741 MCM2P49736 904 aa20.22■□□□□ 0.83
CDKN1A-201ENST00000244741 PODNQ7Z5L7 613 aa20.22■□□□□ 0.83
CDKN1A-201ENST00000244741 GPR162Q16538 588 aa20.21■□□□□ 0.83
CDKN1A-201ENST00000244741 CCDC129Q6ZRS4 1044 aa20.21■□□□□ 0.83
CDKN1A-201ENST00000244741 DDX49Q9Y6V7 483 aaKnown RBP20.21■□□□□ 0.83
CDKN1A-201ENST00000244741 RNF113AO15541 343 aaKnown RBP20.21■□□□□ 0.83
CDKN1A-201ENST00000244741 KLHL40Q2TBA0 621 aa20.21■□□□□ 0.83
CDKN1A-201ENST00000244741 WDR66Q8TBY9 1149 aa20.21■□□□□ 0.83
CDKN1A-201ENST00000244741 PDE6AP16499 860 aa20.2■□□□□ 0.82
CDKN1A-201ENST00000244741 MAP3K12Q12852 859 aa20.2■□□□□ 0.82
CDKN1A-201ENST00000244741 NIM1KQ8IY84 436 aa20.2■□□□□ 0.82
CDKN1A-201ENST00000244741 CERS5Q8N5B7 392 aa20.2■□□□□ 0.82
CDKN1A-201ENST00000244741 ZNF384Q8TF68 577 aa20.2■□□□□ 0.82
CDKN1A-201ENST00000244741 DDX24Q9GZR7 859 aaKnown RBP eCLIP20.2■□□□□ 0.82
CDKN1A-201ENST00000244741 ZNF532Q9HCE3 1301 aa20.2■□□□□ 0.82
CDKN1A-201ENST00000244741 CUL4AQ13619 759 aa20.19■□□□□ 0.82
CDKN1A-201ENST00000244741 LMBRD1Q9NUN5 540 aa20.19■□□□□ 0.82
CDKN1A-201ENST00000244741 SGSM2O43147 1006 aa20.19■□□□□ 0.82
CDKN1A-201ENST00000244741 EPB41L2O43491 1005 aaKnown RBP20.19■□□□□ 0.82
CDKN1A-201ENST00000244741 HSPA4P34932 840 aa20.19■□□□□ 0.82
CDKN1A-201ENST00000244741 MECOMQ03112 1051 aa20.19■□□□□ 0.82
CDKN1A-201ENST00000244741 ADGRA1Q86SQ6 560 aa20.19■□□□□ 0.82
CDKN1A-201ENST00000244741 ZNF589Q86UQ0 364 aaPredicted RBP20.19■□□□□ 0.82
CDKN1A-201ENST00000244741 OSBP2Q969R2 916 aa20.19■□□□□ 0.82
CDKN1A-201ENST00000244741 UPF3BQ9BZI7 483 aaKnown RBP20.19■□□□□ 0.82
CDKN1A-201ENST00000244741 PUS7LQ9H0K6 701 aaKnown RBP20.19■□□□□ 0.82
CDKN1A-201ENST00000244741 LDHBP07195 334 aaKnown RBP20.18■□□□□ 0.82
CDKN1A-201ENST00000244741 ADD2P35612 726 aa20.18■□□□□ 0.82
CDKN1A-201ENST00000244741 DIXDC1Q155Q3 683 aa20.18■□□□□ 0.82
CDKN1A-201ENST00000244741 NOL8Q76FK4 1167 aaKnown RBP20.18■□□□□ 0.82
CDKN1A-201ENST00000244741 JDP2Q8WYK2 163 aa20.18■□□□□ 0.82
CDKN1A-201ENST00000244741 PDS5AQ29RF7 1337 aaKnown RBP20.18■□□□□ 0.82
CDKN1A-201ENST00000244741 M0R2C6 588 aa20.18■□□□□ 0.82
CDKN1A-201ENST00000244741 MIGA1Q8NAN2 632 aa20.18■□□□□ 0.82
CDKN1A-201ENST00000244741 FAM205AQ6ZU69 1335 aa20.17■□□□□ 0.82
CDKN1A-201ENST00000244741 USP17L3A6NCW0 530 aa20.17■□□□□ 0.82
CDKN1A-201ENST00000244741 USP17L4A6NCW7 530 aa20.17■□□□□ 0.82
CDKN1A-201ENST00000244741 USP17L1Q7RTZ2 530 aa20.17■□□□□ 0.82
CDKN1A-201ENST00000244741 DZIP1Q86YF9 867 aaKnown RBP20.17■□□□□ 0.82
CDKN1A-201ENST00000244741 ZNRF3Q9ULT6 936 aa20.17■□□□□ 0.82
CDKN1A-201ENST00000244741 CCDC88AQ3V6T2 1871 aa20.17■□□□□ 0.82
CDKN1A-201ENST00000244741 TCRBV5S4A2TA0A5A2 114 aa20.17■□□□□ 0.82
CDKN1A-201ENST00000244741 CYP7A1P22680 504 aa20.17■□□□□ 0.82
CDKN1A-201ENST00000244741 ZMYM1Q5SVZ6 1142 aa20.17■□□□□ 0.82
CDKN1A-201ENST00000244741 NSUN4Q96CB9 384 aaKnown RBP20.17■□□□□ 0.82
CDKN1A-201ENST00000244741 HIP1O00291 1037 aa20.16■□□□□ 0.82
CDKN1A-201ENST00000244741 PSMD14O00487 310 aa20.16■□□□□ 0.82
CDKN1A-201ENST00000244741 DACT2Q5SW24 774 aa20.16■□□□□ 0.82
CDKN1A-201ENST00000244741 KIAA0825Q8IV33 1275 aa20.16■□□□□ 0.82
CDKN1A-201ENST00000244741 CHAMP1Q96JM3 812 aa20.16■□□□□ 0.82
CDKN1A-201ENST00000244741 LSG1Q9H089 658 aaKnown RBP20.16■□□□□ 0.82
CDKN1A-201ENST00000244741 ZBTB12Q9Y330 459 aaPredicted RBP20.16■□□□□ 0.82
CDKN1A-201ENST00000244741 RAD50Q92878 1312 aa20.15■□□□□ 0.82
CDKN1A-201ENST00000244741 LTBP3Q9NS15 1303 aa20.15■□□□□ 0.82
CDKN1A-201ENST00000244741 SCNN1DP51172 638 aa20.15■□□□□ 0.82
CDKN1A-201ENST00000244741 STRIP1Q5VSL9 837 aa20.15■□□□□ 0.82
CDKN1A-201ENST00000244741 NAA16Q6N069 864 aaPredicted RBP20.15■□□□□ 0.82
CDKN1A-201ENST00000244741 MYH7P12883 1935 aa20.15■□□□□ 0.82
CDKN1A-201ENST00000244741 DOCK2Q92608 1830 aa20.15■□□□□ 0.82
CDKN1A-201ENST00000244741 MAST3O60307 1309 aa20.15■□□□□ 0.82
CDKN1A-201ENST00000244741 SALL1Q9NSC2 1324 aa20.15■□□□□ 0.82
CDKN1A-201ENST00000244741 FOXD4L5Q5VV16 416 aaPredicted RBP20.15■□□□□ 0.82
CDKN1A-201ENST00000244741 ZSCAN25Q6NSZ9 544 aa20.15■□□□□ 0.82
CDKN1A-201ENST00000244741 TBC1D22AQ8WUA7 517 aa20.15■□□□□ 0.82
CDKN1A-201ENST00000244741 FOXD4L4Q8WXT5 416 aaPredicted RBP20.15■□□□□ 0.82
CDKN1A-201ENST00000244741 RRAGDQ9NQL2 400 aaPredicted RBP20.15■□□□□ 0.82
CDKN1A-201ENST00000244741 PRPF40AO75400 957 aaKnown RBP20.14■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms