RNA–Protein interactions for RNA: ENST00000229265.10

CDCA3-201, Transcript of cell division cycle associated 3, humanhuman

TSL 2 BASIC

Gene CDCA3, Length 1,047 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-201ENST00000229265 CHMP3Q9Y3E7 222 aa12.76□□□□□ -0.37
CDCA3-201ENST00000229265 SNX14Q9Y5W7 946 aa12.76□□□□□ -0.37
CDCA3-201ENST00000229265 A0A1B0GUL7 405 aa12.75□□□□□ -0.37
CDCA3-201ENST00000229265 GOLGA6L22H0YM25 854 aa12.75□□□□□ -0.37
CDCA3-201ENST00000229265 ECE2O60344 883 aa12.75□□□□□ -0.37
CDCA3-201ENST00000229265 FRAT2O75474 233 aaPredicted RBP12.75□□□□□ -0.37
CDCA3-201ENST00000229265 HMGB1P09429 215 aaKnown RBP12.75□□□□□ -0.37
CDCA3-201ENST00000229265 TTF1Q15361 905 aaPredicted RBP12.75□□□□□ -0.37
CDCA3-201ENST00000229265 ZSCAN25Q6NSZ9 544 aa12.75□□□□□ -0.37
CDCA3-201ENST00000229265 CCDC171Q6TFL3 1326 aa12.75□□□□□ -0.37
CDCA3-201ENST00000229265 JDP2Q8WYK2 163 aa12.75□□□□□ -0.37
CDCA3-201ENST00000229265 NEUROD6Q96NK8 337 aa12.75□□□□□ -0.37
CDCA3-201ENST00000229265 DBNDD2Q9BQY9 259 aa12.75□□□□□ -0.37
CDCA3-201ENST00000229265 GLIS2Q9BZE0 524 aaPredicted RBP12.75□□□□□ -0.37
CDCA3-201ENST00000229265 SH2B1Q9NRF2 756 aaPredicted RBP12.75□□□□□ -0.37
CDCA3-201ENST00000229265 LIMCH1Q9UPQ0 1083 aa12.75□□□□□ -0.37
CDCA3-201ENST00000229265 PCDHAC2Q9Y5I4 1007 aa12.75□□□□□ -0.37
CDCA3-201ENST00000229265 U3KPZ7 1027 aaPredicted RBP12.75□□□□□ -0.37
CDCA3-201ENST00000229265 C6orf229H3BNL8 230 aa12.74□□□□□ -0.37
CDCA3-201ENST00000229265 UFL1O94874 794 aa12.74□□□□□ -0.37
CDCA3-201ENST00000229265 PDE8BO95263 885 aa12.74□□□□□ -0.37
CDCA3-201ENST00000229265 CD2BP2O95400 341 aaKnown RBP12.74□□□□□ -0.37
CDCA3-201ENST00000229265 MAP4K4O95819 1239 aaPredicted RBP12.74□□□□□ -0.37
CDCA3-201ENST00000229265 IFIT1P09914 478 aaKnown RBP12.74□□□□□ -0.37
CDCA3-201ENST00000229265 UQCRFS1P1P0C7P4 283 aa12.74□□□□□ -0.37
CDCA3-201ENST00000229265 ITGA6P23229 1130 aa12.74□□□□□ -0.37
CDCA3-201ENST00000229265 EIF6P56537 245 aaKnown RBP12.74□□□□□ -0.37
CDCA3-201ENST00000229265 TIMM10P62072 90 aa12.74□□□□□ -0.37
CDCA3-201ENST00000229265 LRRC24Q50LG9 513 aa12.74□□□□□ -0.37
CDCA3-201ENST00000229265 COL13A1Q5TAT6 717 aaPredicted RBP12.74□□□□□ -0.37
CDCA3-201ENST00000229265 TMED8Q6PL24 325 aaPredicted RBP12.74□□□□□ -0.37
CDCA3-201ENST00000229265 HELBQ8NG08 1087 aaPredicted RBP12.74□□□□□ -0.37
CDCA3-201ENST00000229265 TMX3Q96JJ7 454 aa12.74□□□□□ -0.37
CDCA3-201ENST00000229265 DSCC1Q9BVC3 393 aa12.74□□□□□ -0.37
CDCA3-201ENST00000229265 PAG1Q9NWQ8 432 aa12.74□□□□□ -0.37
CDCA3-201ENST00000229265 PODXL2Q9NZ53 605 aa12.74□□□□□ -0.37
CDCA3-201ENST00000229265 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.74□□□□□ -0.37
CDCA3-201ENST00000229265 CYP46A1Q9Y6A2 500 aa12.74□□□□□ -0.37
CDCA3-201ENST00000229265 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.74□□□□□ -0.37
CDCA3-201ENST00000229265 TAF5LO75529 589 aa12.73□□□□□ -0.37
CDCA3-201ENST00000229265 NMIQ13287 307 aaPredicted RBP12.73□□□□□ -0.37
CDCA3-201ENST00000229265 GSE1Q14687 1217 aa12.73□□□□□ -0.37
CDCA3-201ENST00000229265 WASHC4Q2M389 1173 aa12.73□□□□□ -0.37
CDCA3-201ENST00000229265 CCDC152Q4G0S7 254 aa12.73□□□□□ -0.37
CDCA3-201ENST00000229265 GORABQ5T7V8 394 aa12.73□□□□□ -0.37
CDCA3-201ENST00000229265 CIAPIN1Q6FI81 312 aa12.73□□□□□ -0.37
CDCA3-201ENST00000229265 RUFY3Q7L099 469 aa12.73□□□□□ -0.37
CDCA3-201ENST00000229265 TTC14Q96N46 770 aa12.73□□□□□ -0.37
CDCA3-201ENST00000229265 ZIC5Q96T25 663 aa12.73□□□□□ -0.37
CDCA3-201ENST00000229265 PUS3Q9BZE2 481 aaKnown RBP12.73□□□□□ -0.37
CDCA3-201ENST00000229265 TLR7Q9NYK1 1049 aaKnown RBP12.73□□□□□ -0.37
CDCA3-201ENST00000229265 ISY1Q9ULR0 285 aaKnown RBP12.73□□□□□ -0.37
CDCA3-201ENST00000229265 CLEC11AQ9Y240 323 aa12.73□□□□□ -0.37
CDCA3-201ENST00000229265 RNF113AO15541 343 aaKnown RBP12.72□□□□□ -0.37
CDCA3-201ENST00000229265 CYP2E1P05181 493 aaPredicted RBP12.72□□□□□ -0.37
CDCA3-201ENST00000229265 VEGFBP49765 207 aa12.72□□□□□ -0.37
CDCA3-201ENST00000229265 TBC1D10BQ4KMP7 808 aaPredicted RBP12.72□□□□□ -0.37
CDCA3-201ENST00000229265 MICALL2Q8IY33 904 aa12.72□□□□□ -0.37
CDCA3-201ENST00000229265 LPIN2Q92539 896 aa12.72□□□□□ -0.37
CDCA3-201ENST00000229265 XAGE2Q96GT9 111 aa12.72□□□□□ -0.37
CDCA3-201ENST00000229265 GMLQ99445 158 aa12.72□□□□□ -0.37
CDCA3-201ENST00000229265 CDC5LQ99459 802 aaKnown RBP12.72□□□□□ -0.37
CDCA3-201ENST00000229265 CTNNA3Q9UI47 895 aa12.72□□□□□ -0.37
CDCA3-201ENST00000229265 CNOT7Q9UIV1 285 aaKnown RBP12.72□□□□□ -0.37
CDCA3-201ENST00000229265 CNTNAP1P78357 1384 aa12.71□□□□□ -0.37
CDCA3-201ENST00000229265 MED23Q9ULK4 1368 aa12.71□□□□□ -0.37
CDCA3-201ENST00000229265 THSD7BQ9C0I4 1608 aa12.71□□□□□ -0.37
CDCA3-201ENST00000229265 IQCA1LA6NCM1 817 aa12.71□□□□□ -0.37
CDCA3-201ENST00000229265 ADM5C9JUS6 153 aa12.71□□□□□ -0.37
CDCA3-201ENST00000229265 KCNJ4P48050 445 aa12.71□□□□□ -0.37
CDCA3-201ENST00000229265 TTC39AQ5SRH9 613 aa12.71□□□□□ -0.37
CDCA3-201ENST00000229265 ZMYM1Q5SVZ6 1142 aa12.71□□□□□ -0.37
CDCA3-201ENST00000229265 CREB3L3Q68CJ9 461 aa12.71□□□□□ -0.37
CDCA3-201ENST00000229265 FBXL16Q8N461 479 aa12.71□□□□□ -0.37
CDCA3-201ENST00000229265 TNPO1Q92973 898 aaKnown RBP12.71□□□□□ -0.37
CDCA3-201ENST00000229265 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.71□□□□□ -0.37
CDCA3-201ENST00000229265 CNNM1Q9NRU3 951 aa12.71□□□□□ -0.37
CDCA3-201ENST00000229265 PGAP2Q9UHJ9 254 aa12.71□□□□□ -0.37
CDCA3-201ENST00000229265 PALD1Q9ULE6 856 aa12.71□□□□□ -0.37
CDCA3-201ENST00000229265 RBM8AQ9Y5S9 174 aaKnown RBP12.71□□□□□ -0.37
CDCA3-201ENST00000229265 HSPA1AP0DMV8 641 aaKnown RBP12.7□□□□□ -0.38
CDCA3-201ENST00000229265 HSPA1BP0DMV9 641 aaKnown RBP12.7□□□□□ -0.38
CDCA3-201ENST00000229265 FGFR2P21802 821 aa12.7□□□□□ -0.38
CDCA3-201ENST00000229265 PTH1RQ03431 593 aa12.7□□□□□ -0.38
CDCA3-201ENST00000229265 ATP2B3Q16720 1220 aa12.7□□□□□ -0.38
CDCA3-201ENST00000229265 METTL24Q5JXM2 366 aa12.7□□□□□ -0.38
CDCA3-201ENST00000229265 ANKRD18AQ8IVF6 992 aa12.7□□□□□ -0.38
CDCA3-201ENST00000229265 VGLL2Q8N8G2 317 aa12.7□□□□□ -0.38
CDCA3-201ENST00000229265 FAM227BQ96M60 508 aa12.7□□□□□ -0.38
CDCA3-201ENST00000229265 IL25Q9H293 177 aa12.7□□□□□ -0.38
CDCA3-201ENST00000229265 CREBZFQ9NS37 354 aa12.7□□□□□ -0.38
CDCA3-201ENST00000229265 SLC27A2O14975 620 aa12.69□□□□□ -0.38
CDCA3-201ENST00000229265 VIL1P09327 827 aaKnown RBP12.69□□□□□ -0.38
CDCA3-201ENST00000229265 IGHMBP2P38935 993 aaKnown RBP12.69□□□□□ -0.38
CDCA3-201ENST00000229265 PUM3Q15397 648 aaKnown RBP12.69□□□□□ -0.38
CDCA3-201ENST00000229265 RBM26Q5T8P6 1007 aaKnown RBP12.69□□□□□ -0.38
CDCA3-201ENST00000229265 RASEFQ8IZ41 740 aa12.69□□□□□ -0.38
CDCA3-201ENST00000229265 CERS5Q8N5B7 392 aa12.69□□□□□ -0.38
CDCA3-201ENST00000229265 SPRYD3Q8NCJ5 442 aa12.69□□□□□ -0.38
CDCA3-201ENST00000229265 SUPT20HQ8NEM7 779 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms