RNA–Protein interactions for RNA: ENST00000221166.9

NEFM-201, Transcript of neurofilament medium, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NEFM, Length 4,020 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEFM-201ENST00000221166 NLRP12P59046 1061 aa12.92□□□□□ -0.34
NEFM-201ENST00000221166 PNOCQ13519 176 aa12.92□□□□□ -0.34
NEFM-201ENST00000221166 SAFBQ15424 915 aaKnown RBP eCLIP12.92□□□□□ -0.34
NEFM-201ENST00000221166 CCDC191Q8NCU4 936 aa12.92□□□□□ -0.34
NEFM-201ENST00000221166 AIDAQ96BJ3 306 aa12.92□□□□□ -0.34
NEFM-201ENST00000221166 UTP14AQ9BVJ6 771 aaKnown RBP12.92□□□□□ -0.34
NEFM-201ENST00000221166 C19orf44Q9H6X5 657 aa12.92□□□□□ -0.34
NEFM-201ENST00000221166 KIF2AO00139 706 aaPredicted RBP12.91□□□□□ -0.34
NEFM-201ENST00000221166 CCZ1BP86790 482 aa12.91□□□□□ -0.34
NEFM-201ENST00000221166 CCZ1P86791 482 aaPredicted RBP12.91□□□□□ -0.34
NEFM-201ENST00000221166 BRAPQ7Z569 592 aa12.91□□□□□ -0.34
NEFM-201ENST00000221166 ILDR1Q86SU0 546 aaPredicted RBP12.91□□□□□ -0.34
NEFM-201ENST00000221166 SYNE4Q8N205 404 aa12.91□□□□□ -0.34
NEFM-201ENST00000221166 UBXN4Q92575 508 aa12.91□□□□□ -0.34
NEFM-201ENST00000221166 ERO1AQ96HE7 468 aa12.91□□□□□ -0.34
NEFM-201ENST00000221166 ZFYP08048 801 aaPredicted RBP12.91□□□□□ -0.34
NEFM-201ENST00000221166 TMEM67Q5HYA8 995 aa12.91□□□□□ -0.34
NEFM-201ENST00000221166 KRT222Q8N1A0 295 aa12.91□□□□□ -0.34
NEFM-201ENST00000221166 APPBP2Q92624 585 aa12.91□□□□□ -0.34
NEFM-201ENST00000221166 DENND2AQ9ULE3 1009 aa12.91□□□□□ -0.34
NEFM-201ENST00000221166 KIF28PB7ZC32 967 aa12.91□□□□□ -0.34
NEFM-201ENST00000221166 IFIT3O14879 490 aaKnown RBP12.91□□□□□ -0.34
NEFM-201ENST00000221166 KRT40Q6A162 431 aa12.91□□□□□ -0.34
NEFM-201ENST00000221166 CDKL5O76039 1030 aa12.91□□□□□ -0.34
NEFM-201ENST00000221166 YEATS4O95619 227 aa12.91□□□□□ -0.34
NEFM-201ENST00000221166 INCENPQ9NQS7 918 aa12.91□□□□□ -0.34
NEFM-201ENST00000221166 ZBTB43O43298 467 aa12.9□□□□□ -0.34
NEFM-201ENST00000221166 VPS37DQ86XT2 251 aa12.9□□□□□ -0.34
NEFM-201ENST00000221166 ZKSCAN3Q9BRR0 538 aa12.9□□□□□ -0.34
NEFM-201ENST00000221166 ARHGAP29Q52LW3 1261 aa12.9□□□□□ -0.34
NEFM-201ENST00000221166 ARHGAP23Q9P227 1491 aa12.9□□□□□ -0.34
NEFM-201ENST00000221166 A0A1W2PQ27 194 aa12.9□□□□□ -0.35
NEFM-201ENST00000221166 A0A1W2PQ64 194 aa12.9□□□□□ -0.35
NEFM-201ENST00000221166 A0A1W2PQD8 194 aa12.9□□□□□ -0.35
NEFM-201ENST00000221166 CBFA2T2O43439 604 aa12.9□□□□□ -0.35
NEFM-201ENST00000221166 CCDC102BQ68D86 513 aa12.9□□□□□ -0.35
NEFM-201ENST00000221166 LRRC37A3O60309 1634 aa12.89□□□□□ -0.35
NEFM-201ENST00000221166 RBM6P78332 1123 aaKnown RBP12.89□□□□□ -0.35
NEFM-201ENST00000221166 KIF23Q02241 960 aaPredicted RBP12.89□□□□□ -0.35
NEFM-201ENST00000221166 KMT5BQ4FZB7 885 aa12.89□□□□□ -0.35
NEFM-201ENST00000221166 KLHL10Q6JEL2 608 aa12.89□□□□□ -0.35
NEFM-201ENST00000221166 FBXO38Q6PIJ6 1188 aa12.89□□□□□ -0.35
NEFM-201ENST00000221166 PPP1R13BQ96KQ4 1090 aa12.89□□□□□ -0.35
NEFM-201ENST00000221166 SLC12A7Q9Y666 1083 aa12.89□□□□□ -0.35
NEFM-201ENST00000221166 CPLX3Q8WVH0 158 aa12.89□□□□□ -0.35
NEFM-201ENST00000221166 ANGEL1Q9UNK9 670 aaKnown RBP12.89□□□□□ -0.35
NEFM-201ENST00000221166 KDM6AO15550 1401 aaPredicted RBP12.89□□□□□ -0.35
NEFM-201ENST00000221166 POLR3GO15318 223 aaPredicted RBP12.89□□□□□ -0.35
NEFM-201ENST00000221166 ARMCX5Q6P1M9 558 aa12.89□□□□□ -0.35
NEFM-201ENST00000221166 NAPBQ9H115 298 aa12.89□□□□□ -0.35
NEFM-201ENST00000221166 TRMT112Q9UI30 125 aaKnown RBP12.89□□□□□ -0.35
NEFM-201ENST00000221166 WDHD1O75717 1129 aaPredicted RBP12.88□□□□□ -0.35
NEFM-201ENST00000221166 CASP7P55210 303 aa12.88□□□□□ -0.35
NEFM-201ENST00000221166 UTP14CQ5TAP6 766 aaKnown RBP12.88□□□□□ -0.35
NEFM-201ENST00000221166 CMTR1Q8N1G2 835 aaKnown RBP12.88□□□□□ -0.35
NEFM-201ENST00000221166 GPR108Q9NPR9 543 aa12.88□□□□□ -0.35
NEFM-201ENST00000221166 POLR3EQ9NVU0 708 aa12.88□□□□□ -0.35
NEFM-201ENST00000221166 ARGLU1Q9NWB6 273 aaPredicted RBP12.88□□□□□ -0.35
NEFM-201ENST00000221166 TMOD3Q9NYL9 352 aa12.88□□□□□ -0.35
NEFM-201ENST00000221166 IMPACTQ9P2X3 320 aa12.88□□□□□ -0.35
NEFM-201ENST00000221166 HOOK1Q9UJC3 728 aaKnown RBP12.88□□□□□ -0.35
NEFM-201ENST00000221166 SLIT1O75093 1534 aa12.88□□□□□ -0.35
NEFM-201ENST00000221166 CMA1P23946 247 aa12.88□□□□□ -0.35
NEFM-201ENST00000221166 AKAP17AQ02040 695 aaKnown RBP12.88□□□□□ -0.35
NEFM-201ENST00000221166 SSRP1Q08945 709 aaKnown RBP12.88□□□□□ -0.35
NEFM-201ENST00000221166 ZSWIM4Q9H7M6 989 aa12.88□□□□□ -0.35
NEFM-201ENST00000221166 ERICH2A1L162 156 aa12.88□□□□□ -0.35
NEFM-201ENST00000221166 TDO2P48775 406 aa12.88□□□□□ -0.35
NEFM-201ENST00000221166 MYL5Q02045 173 aa12.88□□□□□ -0.35
NEFM-201ENST00000221166 FANCLQ9NW38 375 aa12.88□□□□□ -0.35
NEFM-201ENST00000221166 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.88□□□□□ -0.35
NEFM-201ENST00000221166 GNG11P61952 73 aa12.87□□□□□ -0.35
NEFM-201ENST00000221166 CTDSPL2Q05D32 466 aa12.87□□□□□ -0.35
NEFM-201ENST00000221166 E4F1Q66K89 784 aaPredicted RBP12.87□□□□□ -0.35
NEFM-201ENST00000221166 DDX41Q9UJV9 622 aaKnown RBP12.87□□□□□ -0.35
NEFM-201ENST00000221166 KCNJ14Q9UNX9 436 aa12.87□□□□□ -0.35
NEFM-201ENST00000221166 ANKRD18BA2A2Z9 1011 aa12.87□□□□□ -0.35
NEFM-201ENST00000221166 ITGA6P23229 1130 aa12.87□□□□□ -0.35
NEFM-201ENST00000221166 ZNF827Q17R98 1081 aa12.87□□□□□ -0.35
NEFM-201ENST00000221166 TEX35Q5T0J7 233 aa12.87□□□□□ -0.35
NEFM-201ENST00000221166 NBPF11Q86T75 865 aa12.87□□□□□ -0.35
NEFM-201ENST00000221166 DNAJC10Q8IXB1 793 aa12.87□□□□□ -0.35
NEFM-201ENST00000221166 TRMT44Q8IYL2 757 aaKnown RBP12.87□□□□□ -0.35
NEFM-201ENST00000221166 TRIM22Q8IYM9 498 aa12.87□□□□□ -0.35
NEFM-201ENST00000221166 KCNH3Q9ULD8 1083 aa12.87□□□□□ -0.35
NEFM-201ENST00000221166 KAT6BQ8WYB5 2073 aa12.87□□□□□ -0.35
NEFM-201ENST00000221166 PALLDQ8WX93 1383 aa12.87□□□□□ -0.35
NEFM-201ENST00000221166 CCP110O43303 1012 aa12.86□□□□□ -0.35
NEFM-201ENST00000221166 ANTXR2P58335 489 aa12.86□□□□□ -0.35
NEFM-201ENST00000221166 TCIRG1Q13488 830 aa12.86□□□□□ -0.35
NEFM-201ENST00000221166 SLC39A14Q15043 492 aa12.86□□□□□ -0.35
NEFM-201ENST00000221166 TMCO3Q6UWJ1 677 aa12.86□□□□□ -0.35
NEFM-201ENST00000221166 NYAP1Q6ZVC0 841 aa12.86□□□□□ -0.35
NEFM-201ENST00000221166 MB21D2Q8IYB1 491 aaPredicted RBP12.86□□□□□ -0.35
NEFM-201ENST00000221166 DPF2Q92785 391 aa12.86□□□□□ -0.35
NEFM-201ENST00000221166 SENP2Q9HC62 589 aa12.86□□□□□ -0.35
NEFM-201ENST00000221166 IQSEC3Q9UPP2 1182 aaPredicted RBP12.86□□□□□ -0.35
NEFM-201ENST00000221166 ZNF532Q9HCE3 1301 aa12.86□□□□□ -0.35
NEFM-201ENST00000221166 LRP10Q7Z4F1 713 aa12.86□□□□□ -0.35
NEFM-201ENST00000221166 CARD6Q9BX69 1037 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms