RNA–Protein interactions for RNA: ENST00000219084.10

CHD9-201, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 1 (best)

Gene CHD9, Length 8,739 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-201ENST00000219084 E9PCH4 1651 aa4.98□□□□□ -1.61
CHD9-201ENST00000219084 ACTN4O43707 911 aaKnown RBP4.98□□□□□ -1.61
CHD9-201ENST00000219084 CUTAO60888 179 aa4.98□□□□□ -1.61
CHD9-201ENST00000219084 CNGA1P29973 690 aa4.98□□□□□ -1.61
CHD9-201ENST00000219084 MAP3K9P80192 1104 aa4.98□□□□□ -1.61
CHD9-201ENST00000219084 TMTC1Q8IUR5 882 aa4.98□□□□□ -1.61
CHD9-201ENST00000219084 STK11IPQ8N1F8 1099 aa4.98□□□□□ -1.61
CHD9-201ENST00000219084 CCDC42Q96M95 316 aa4.98□□□□□ -1.61
CHD9-201ENST00000219084 NAPGQ99747 312 aaPredicted RBP4.98□□□□□ -1.61
CHD9-201ENST00000219084 SLC26A6Q9BXS9 759 aa4.98□□□□□ -1.61
CHD9-201ENST00000219084 DACT1Q9NYF0 836 aa4.98□□□□□ -1.61
CHD9-201ENST00000219084 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP4.98□□□□□ -1.61
CHD9-201ENST00000219084 GNA14O95837 355 aa4.98□□□□□ -1.61
CHD9-201ENST00000219084 RPS6KB1P23443 525 aa4.98□□□□□ -1.61
CHD9-201ENST00000219084 RRAGBQ5VZM2 374 aa4.98□□□□□ -1.61
CHD9-201ENST00000219084 CRACR2BQ8N4Y2 399 aaPredicted RBP4.98□□□□□ -1.61
CHD9-201ENST00000219084 AOPEPQ8N6M6 819 aa4.98□□□□□ -1.61
CHD9-201ENST00000219084 CCDC113Q9H0I3 377 aa4.98□□□□□ -1.61
CHD9-201ENST00000219084 PARP2Q9UGN5 583 aa4.98□□□□□ -1.61
CHD9-201ENST00000219084 KCNG1Q9UIX4 513 aa4.98□□□□□ -1.61
CHD9-201ENST00000219084 PTPRTO14522 1441 aa4.98□□□□□ -1.61
CHD9-201ENST00000219084 LACTBP83111 547 aaPredicted RBP4.98□□□□□ -1.61
CHD9-201ENST00000219084 ATP11AP98196 1134 aa4.98□□□□□ -1.61
CHD9-201ENST00000219084 TRIML1Q8N9V2 468 aa4.98□□□□□ -1.61
CHD9-201ENST00000219084 C6orf50Q9HD87 102 aa4.98□□□□□ -1.61
CHD9-201ENST00000219084 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP4.98□□□□□ -1.61
CHD9-201ENST00000219084 EFCAB6Q5THR3 1501 aa4.98□□□□□ -1.61
CHD9-201ENST00000219084 MINDY4BA8MYZ0 360 aa4.97□□□□□ -1.61
CHD9-201ENST00000219084 TMED8Q6PL24 325 aaPredicted RBP4.97□□□□□ -1.61
CHD9-201ENST00000219084 NME9Q86XW9 330 aa4.97□□□□□ -1.61
CHD9-201ENST00000219084 RPGRQ92834 1020 aaKnown RBP4.97□□□□□ -1.61
CHD9-201ENST00000219084 SMC6Q96SB8 1091 aa4.97□□□□□ -1.61
CHD9-201ENST00000219084 BCORL1Q5H9F3 1711 aa4.97□□□□□ -1.61
CHD9-201ENST00000219084 KLF18A0A0U1RQI7 1052 aa4.97□□□□□ -1.61
CHD9-201ENST00000219084 SSR1P43307 286 aaKnown RBP4.97□□□□□ -1.61
CHD9-201ENST00000219084 PPP2R3AQ06190 1150 aa4.97□□□□□ -1.61
CHD9-201ENST00000219084 ARHGAP24Q8N264 748 aa4.97□□□□□ -1.61
CHD9-201ENST00000219084 GABPB2Q8TAK5 448 aaPredicted RBP4.97□□□□□ -1.61
CHD9-201ENST00000219084 KIFAP3Q92845 792 aa4.97□□□□□ -1.61
CHD9-201ENST00000219084 RUNDC3BQ96NL0 473 aa4.97□□□□□ -1.61
CHD9-201ENST00000219084 STIM2Q9P246 746 aa4.97□□□□□ -1.61
CHD9-201ENST00000219084 MYO1AQ9UBC5 1043 aa4.97□□□□□ -1.61
CHD9-201ENST00000219084 UGGT1Q9NYU2 1555 aa4.97□□□□□ -1.61
CHD9-201ENST00000219084 PCP11498 1178 aaKnown RBP4.97□□□□□ -1.61
CHD9-201ENST00000219084 NOP2P46087 812 aaKnown RBP4.97□□□□□ -1.61
CHD9-201ENST00000219084 SNX16P57768 344 aa4.97□□□□□ -1.61
CHD9-201ENST00000219084 CHMP4BP1P59074 171 aa4.97□□□□□ -1.61
CHD9-201ENST00000219084 APBA1Q02410 837 aa4.97□□□□□ -1.61
CHD9-201ENST00000219084 CCDC186Q7Z3E2 898 aa4.97□□□□□ -1.61
CHD9-201ENST00000219084 MICU3Q86XE3 530 aa4.97□□□□□ -1.61
CHD9-201ENST00000219084 SYCP3Q8IZU3 236 aa4.97□□□□□ -1.61
CHD9-201ENST00000219084 UBL4BQ8N7F7 174 aa4.97□□□□□ -1.61
CHD9-201ENST00000219084 FBF1Q8TES7 1133 aa4.97□□□□□ -1.61
CHD9-201ENST00000219084 PPP1R9BQ96SB3 815 aa4.97□□□□□ -1.61
CHD9-201ENST00000219084 PI4KAP2A4QPH2 592 aa4.97□□□□□ -1.61
CHD9-201ENST00000219084 DEXIO95424 95 aa4.97□□□□□ -1.61
CHD9-201ENST00000219084 RASSF2P50749 326 aa4.97□□□□□ -1.61
CHD9-201ENST00000219084 PI4KAP1Q8N8J0 262 aa4.97□□□□□ -1.61
CHD9-201ENST00000219084 SPAG5Q96R06 1193 aa4.97□□□□□ -1.61
CHD9-201ENST00000219084 ABCF2Q9UG63 623 aa4.97□□□□□ -1.61
CHD9-201ENST00000219084 TRMT112Q9UI30 125 aaKnown RBP4.97□□□□□ -1.61
CHD9-201ENST00000219084 PLEKHG1Q9ULL1 1385 aa4.97□□□□□ -1.61
CHD9-201ENST00000219084 TMCO5BA8MYB1 307 aa4.97□□□□□ -1.61
CHD9-201ENST00000219084 SETSIPP0DME0 302 aa4.97□□□□□ -1.61
CHD9-201ENST00000219084 CCT2P78371 535 aaKnown RBP4.97□□□□□ -1.61
CHD9-201ENST00000219084 UBXN1Q04323 297 aa4.97□□□□□ -1.61
CHD9-201ENST00000219084 DNM1Q05193 864 aaKnown RBP4.97□□□□□ -1.61
CHD9-201ENST00000219084 CCDC84Q86UT8 332 aaPredicted RBP4.97□□□□□ -1.61
CHD9-201ENST00000219084 WDR66Q8TBY9 1149 aa4.97□□□□□ -1.61
CHD9-201ENST00000219084 ANKRD2Q9GZV1 360 aa4.97□□□□□ -1.61
CHD9-201ENST00000219084 FEZ2Q9UHY8 353 aaPredicted RBP4.97□□□□□ -1.61
CHD9-201ENST00000219084 USP32Q8NFA0 1604 aa4.97□□□□□ -1.61
CHD9-201ENST00000219084 SYNRGQ9UMZ2 1314 aa4.97□□□□□ -1.61
CHD9-201ENST00000219084 GLI2P10070 1586 aa4.97□□□□□ -1.61
CHD9-201ENST00000219084 AK2P54819 239 aa4.97□□□□□ -1.61
CHD9-201ENST00000219084 ZNF804AQ7Z570 1209 aa4.97□□□□□ -1.61
CHD9-201ENST00000219084 RRP36Q96EU6 259 aaKnown RBP4.97□□□□□ -1.61
CHD9-201ENST00000219084 ZMYND15Q9H091 742 aa4.97□□□□□ -1.61
CHD9-201ENST00000219084 HOMER2Q9NSB8 354 aa4.97□□□□□ -1.61
CHD9-201ENST00000219084 UTP11Q9Y3A2 253 aaKnown RBP4.97□□□□□ -1.61
CHD9-201ENST00000219084 EMILIN1Q9Y6C2 1016 aa4.97□□□□□ -1.61
CHD9-201ENST00000219084 TSPY2A6NKD2 308 aa4.97□□□□□ -1.61
CHD9-201ENST00000219084 IRX4P78413 519 aa4.97□□□□□ -1.61
CHD9-201ENST00000219084 PCDH11XQ9BZA7 1347 aa4.97□□□□□ -1.61
CHD9-201ENST00000219084 PCDH11YQ9BZA8 1340 aa4.97□□□□□ -1.61
CHD9-201ENST00000219084 ADGRL3Q9HAR2 1447 aa4.96□□□□□ -1.61
CHD9-201ENST00000219084 VAMP4O75379 141 aa4.96□□□□□ -1.61
CHD9-201ENST00000219084 ZNF75DP51815 510 aa4.96□□□□□ -1.61
CHD9-201ENST00000219084 IRX3P78415 501 aaPredicted RBP4.96□□□□□ -1.61
CHD9-201ENST00000219084 SF3B2Q13435 895 aaKnown RBP4.96□□□□□ -1.61
CHD9-201ENST00000219084 PAXIP1Q6ZW49 1069 aaPredicted RBP4.96□□□□□ -1.61
CHD9-201ENST00000219084 UBE3BQ7Z3V4 1068 aa4.96□□□□□ -1.61
CHD9-201ENST00000219084 DAAM2Q86T65 1068 aa4.96□□□□□ -1.61
CHD9-201ENST00000219084 CNPY4Q8N129 248 aa4.96□□□□□ -1.61
CHD9-201ENST00000219084 CALR3Q96L12 384 aaKnown RBP4.96□□□□□ -1.61
CHD9-201ENST00000219084 ACEP12821 1306 aa4.96□□□□□ -1.61
CHD9-201ENST00000219084 AATKQ6ZMQ8 1374 aa4.96□□□□□ -1.61
CHD9-201ENST00000219084 WDHD1O75717 1129 aaPredicted RBP4.96□□□□□ -1.61
CHD9-201ENST00000219084 IDI1Q13907 227 aa4.96□□□□□ -1.61
CHD9-201ENST00000219084 SH2D4BQ5SQS7 431 aa4.96□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms