RNA–Protein interactions for RNA: ENST00000216294.4

SNAPC1-201, Transcript of small nuclear RNA activating complex polypeptide 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNAPC1, Length 2,656 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC1-201ENST00000216294 SF3A1Q15459 793 aaKnown RBP18.46■□□□□ 0.54
SNAPC1-201ENST00000216294 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.45■□□□□ 0.54
SNAPC1-201ENST00000216294 MAP3K15Q6ZN16 1313 aa18.45■□□□□ 0.54
SNAPC1-201ENST00000216294 KLF18A0A0U1RQI7 1052 aa18.45■□□□□ 0.54
SNAPC1-201ENST00000216294 SMC2O95347 1197 aa18.45■□□□□ 0.54
SNAPC1-201ENST00000216294 ARHGAP30Q7Z6I6 1101 aaPredicted RBP18.45■□□□□ 0.54
SNAPC1-201ENST00000216294 FMR1NBQ8N0W7 255 aaPredicted RBP18.45■□□□□ 0.54
SNAPC1-201ENST00000216294 SENP2Q9HC62 589 aa18.45■□□□□ 0.54
SNAPC1-201ENST00000216294 FGAP02671 866 aa18.45■□□□□ 0.54
SNAPC1-201ENST00000216294 STK38Q15208 465 aa18.45■□□□□ 0.54
SNAPC1-201ENST00000216294 GORABQ5T7V8 394 aa18.45■□□□□ 0.54
SNAPC1-201ENST00000216294 DOT1LQ8TEK3 1739 aa18.44■□□□□ 0.54
SNAPC1-201ENST00000216294 MARCH10Q8NA82 808 aaPredicted RBP18.44■□□□□ 0.54
SNAPC1-201ENST00000216294 XPO4Q9C0E2 1151 aaKnown RBP18.44■□□□□ 0.54
SNAPC1-201ENST00000216294 HELLSQ9NRZ9 838 aa18.44■□□□□ 0.54
SNAPC1-201ENST00000216294 GOLGA8BA8MQT2 603 aa18.44■□□□□ 0.54
SNAPC1-201ENST00000216294 ZAP70P43403 619 aa18.44■□□□□ 0.54
SNAPC1-201ENST00000216294 MRPS27Q92552 414 aaKnown RBP18.44■□□□□ 0.54
SNAPC1-201ENST00000216294 LLPHQ9BRT6 129 aaKnown RBP18.44■□□□□ 0.54
SNAPC1-201ENST00000216294 DSCC1Q9BVC3 393 aa18.44■□□□□ 0.54
SNAPC1-201ENST00000216294 IFNKQ9P0W0 207 aa18.44■□□□□ 0.54
SNAPC1-201ENST00000216294 EYA2O00167 538 aa18.43■□□□□ 0.54
SNAPC1-201ENST00000216294 PRC1O43663 620 aa18.43■□□□□ 0.54
SNAPC1-201ENST00000216294 TOM1O60784 492 aa18.43■□□□□ 0.54
SNAPC1-201ENST00000216294 PTPN14Q15678 1187 aa18.43■□□□□ 0.54
SNAPC1-201ENST00000216294 TMC6Q7Z403 805 aa18.43■□□□□ 0.54
SNAPC1-201ENST00000216294 ZNF396Q96N95 335 aaPredicted RBP18.43■□□□□ 0.54
SNAPC1-201ENST00000216294 SPATA31A5Q5VU36 1347 aa18.43■□□□□ 0.54
SNAPC1-201ENST00000216294 SPATA31A7Q8IWB4 1347 aa18.43■□□□□ 0.54
SNAPC1-201ENST00000216294 ATP1A3P13637 1013 aa18.43■□□□□ 0.54
SNAPC1-201ENST00000216294 LMOD1P29536 600 aaPredicted RBP18.43■□□□□ 0.54
SNAPC1-201ENST00000216294 ANTXR2P58335 489 aa18.43■□□□□ 0.54
SNAPC1-201ENST00000216294 GIGYF2Q6Y7W6 1299 aaKnown RBP18.43■□□□□ 0.54
SNAPC1-201ENST00000216294 C8orf76Q96K31 380 aa18.43■□□□□ 0.54
SNAPC1-201ENST00000216294 ANO10Q9NW15 660 aa18.43■□□□□ 0.54
SNAPC1-201ENST00000216294 HPS5Q9UPZ3 1129 aa18.43■□□□□ 0.54
SNAPC1-201ENST00000216294 THRAP3Q9Y2W1 955 aaKnown RBP18.43■□□□□ 0.54
SNAPC1-201ENST00000216294 NWD2Q9ULI1 1742 aa18.43■□□□□ 0.54
SNAPC1-201ENST00000216294 PDIA4P13667 645 aaKnown RBP18.42■□□□□ 0.54
SNAPC1-201ENST00000216294 LINC00301Q8NCQ3 95 aa18.42■□□□□ 0.54
SNAPC1-201ENST00000216294 MRFAP1L1Q96HT8 127 aa18.42■□□□□ 0.54
SNAPC1-201ENST00000216294 CDCA7Q9BWT1 371 aaPredicted RBP18.42■□□□□ 0.54
SNAPC1-201ENST00000216294 ORC3Q9UBD5 711 aaPredicted RBP18.42■□□□□ 0.54
SNAPC1-201ENST00000216294 CTNNA3Q9UI47 895 aa18.42■□□□□ 0.54
SNAPC1-201ENST00000216294 NEDD4P46934 1319 aa18.42■□□□□ 0.54
SNAPC1-201ENST00000216294 HMGB1P09429 215 aaKnown RBP18.42■□□□□ 0.54
SNAPC1-201ENST00000216294 ELF2Q15723 593 aa18.42■□□□□ 0.54
SNAPC1-201ENST00000216294 CEP57L1Q8IYX8 460 aa18.42■□□□□ 0.54
SNAPC1-201ENST00000216294 XAGE2Q96GT9 111 aa18.42■□□□□ 0.54
SNAPC1-201ENST00000216294 MYL10Q9BUA6 226 aa18.42■□□□□ 0.54
SNAPC1-201ENST00000216294 AGXT2Q9BYV1 514 aa18.42■□□□□ 0.54
SNAPC1-201ENST00000216294 MROH7-TTC4A0A0A0MT08 1334 aa18.41■□□□□ 0.54
SNAPC1-201ENST00000216294 WDHD1O75717 1129 aaPredicted RBP18.41■□□□□ 0.54
SNAPC1-201ENST00000216294 TRIM28Q13263 835 aaKnown RBP18.41■□□□□ 0.54
SNAPC1-201ENST00000216294 SARM1Q6SZW1 724 aa18.41■□□□□ 0.54
SNAPC1-201ENST00000216294 PHKBQ93100 1093 aa18.41■□□□□ 0.54
SNAPC1-201ENST00000216294 ST7Q9NRC1 585 aa18.41■□□□□ 0.54
SNAPC1-201ENST00000216294 TBC1D2BQ9UPU7 963 aa18.41■□□□□ 0.54
SNAPC1-201ENST00000216294 PCCAP05165 728 aaPredicted RBP18.41■□□□□ 0.54
SNAPC1-201ENST00000216294 IL15P40933 162 aaPredicted RBP18.41■□□□□ 0.54
SNAPC1-201ENST00000216294 TTC39AQ5SRH9 613 aa18.41■□□□□ 0.54
SNAPC1-201ENST00000216294 ARMCX5Q6P1M9 558 aa18.41■□□□□ 0.54
SNAPC1-201ENST00000216294 SPECC1Q5M775 1068 aa18.4■□□□□ 0.54
SNAPC1-201ENST00000216294 CCAR2Q8N163 923 aaKnown RBP18.4■□□□□ 0.54
SNAPC1-201ENST00000216294 KMT5BQ4FZB7 885 aa18.4■□□□□ 0.54
SNAPC1-201ENST00000216294 NLRP10Q86W26 655 aa18.4■□□□□ 0.54
SNAPC1-201ENST00000216294 ZBTB38Q8NAP3 1195 aaPredicted RBP18.4■□□□□ 0.54
SNAPC1-201ENST00000216294 KIAA1468Q9P260 1216 aa18.4■□□□□ 0.54
SNAPC1-201ENST00000216294 MYO5AQ9Y4I1 1855 aaKnown RBP18.4■□□□□ 0.54
SNAPC1-201ENST00000216294 CDC25BP30305 580 aa18.39■□□□□ 0.54
SNAPC1-201ENST00000216294 CCDC57Q2TAC2 916 aa18.39■□□□□ 0.54
SNAPC1-201ENST00000216294 NYAP1Q6ZVC0 841 aa18.39■□□□□ 0.54
SNAPC1-201ENST00000216294 ZNF274Q96GC6 653 aaPredicted RBP18.39■□□□□ 0.54
SNAPC1-201ENST00000216294 CLIC6Q96NY7 704 aa18.39■□□□□ 0.54
SNAPC1-201ENST00000216294 SLIT2O94813 1529 aa18.39■□□□□ 0.53
SNAPC1-201ENST00000216294 SPTLC2O15270 562 aa18.39■□□□□ 0.53
SNAPC1-201ENST00000216294 ADALQ6DHV7 355 aa18.39■□□□□ 0.53
SNAPC1-201ENST00000216294 DZIP3Q86Y13 1208 aaKnown RBP18.39■□□□□ 0.53
SNAPC1-201ENST00000216294 DPF2Q92785 391 aa18.39■□□□□ 0.53
SNAPC1-201ENST00000216294 TMX1Q9H3N1 280 aa18.39■□□□□ 0.53
SNAPC1-201ENST00000216294 CEP126Q9P2H0 1117 aa18.39■□□□□ 0.53
SNAPC1-201ENST00000216294 UBAP1LF5GYI3 381 aa18.38■□□□□ 0.53
SNAPC1-201ENST00000216294 CPLX1O14810 134 aa18.38■□□□□ 0.53
SNAPC1-201ENST00000216294 CTAGE5O15320 804 aa18.38■□□□□ 0.53
SNAPC1-201ENST00000216294 ZNF202O95125 648 aa18.38■□□□□ 0.53
SNAPC1-201ENST00000216294 RBM6P78332 1123 aaKnown RBP18.38■□□□□ 0.53
SNAPC1-201ENST00000216294 MYSM1Q5VVJ2 828 aa18.38■□□□□ 0.53
SNAPC1-201ENST00000216294 E4F1Q66K89 784 aaPredicted RBP18.38■□□□□ 0.53
SNAPC1-201ENST00000216294 SNAP23O00161 211 aa18.38■□□□□ 0.53
SNAPC1-201ENST00000216294 ZBTB9Q96C00 473 aa18.38■□□□□ 0.53
SNAPC1-201ENST00000216294 RTEL1Q9NZ71 1219 aa18.38■□□□□ 0.53
SNAPC1-201ENST00000216294 PFKFB1P16118 471 aa18.37■□□□□ 0.53
SNAPC1-201ENST00000216294 SYT10Q6XYQ8 523 aa18.37■□□□□ 0.53
SNAPC1-201ENST00000216294 FBXO18Q8NFZ0 1043 aa18.37■□□□□ 0.53
SNAPC1-201ENST00000216294 NBPF3Q9H094 633 aa18.37■□□□□ 0.53
SNAPC1-201ENST00000216294 PAXBP1Q9Y5B6 917 aa18.37■□□□□ 0.53
SNAPC1-201ENST00000216294 APPP05067 770 aa18.37■□□□□ 0.53
SNAPC1-201ENST00000216294 ATP6V1AP38606 617 aa18.37■□□□□ 0.53
SNAPC1-201ENST00000216294 ZRSR1Q15695 479 aaKnown RBP18.37■□□□□ 0.53
SNAPC1-201ENST00000216294 FAM98CQ17RN3 349 aaKnown RBP18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms