RNA–Protein interactions for RNA: ENST00000216085.11

RHBDD3-201, Transcript of rhomboid domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RHBDD3, Length 1,794 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3-201ENST00000216085 DDX24Q9GZR7 859 aaKnown RBP eCLIP24.5■■□□□ 1.51
RHBDD3-201ENST00000216085 NDUFB9Q9Y6M9 179 aa24.5■■□□□ 1.51
RHBDD3-201ENST00000216085 SCN4AP35499 1836 aa24.49■■□□□ 1.51
RHBDD3-201ENST00000216085 IDH1O75874 414 aaKnown RBP24.49■■□□□ 1.51
RHBDD3-201ENST00000216085 GSTO1P78417 241 aa24.49■■□□□ 1.51
RHBDD3-201ENST00000216085 LRRFIP1Q32MZ4 808 aaKnown RBP24.49■■□□□ 1.51
RHBDD3-201ENST00000216085 TMED8Q6PL24 325 aaPredicted RBP24.49■■□□□ 1.51
RHBDD3-201ENST00000216085 GPBP1L1Q9HC44 474 aaPredicted RBP24.49■■□□□ 1.51
RHBDD3-201ENST00000216085 VEGFAP15692 232 aaPredicted RBP24.49■■□□□ 1.51
RHBDD3-201ENST00000216085 HDLBPQ00341 1268 aaKnown RBP24.49■■□□□ 1.51
RHBDD3-201ENST00000216085 ADARB2Q9NS39 739 aaKnown RBP24.49■■□□□ 1.51
RHBDD3-201ENST00000216085 SERPINA10Q9UK55 444 aa24.49■■□□□ 1.51
RHBDD3-201ENST00000216085 ZNF280AP59817 542 aaPredicted RBP24.48■■□□□ 1.51
RHBDD3-201ENST00000216085 TEKT1Q969V4 418 aa24.48■■□□□ 1.51
RHBDD3-201ENST00000216085 RBM5P52756 815 aaKnown RBP eCLIP24.47■■□□□ 1.51
RHBDD3-201ENST00000216085 ZSCAN25Q6NSZ9 544 aa24.47■■□□□ 1.51
RHBDD3-201ENST00000216085 CNTROBQ8N137 903 aa24.47■■□□□ 1.51
RHBDD3-201ENST00000216085 MYOZ2Q9NPC6 264 aa24.47■■□□□ 1.51
RHBDD3-201ENST00000216085 PIH1D3Q9NQM4 214 aaKnown RBP24.47■■□□□ 1.51
RHBDD3-201ENST00000216085 TRIM6-TRIM34B2RNG4 842 aa24.47■■□□□ 1.51
RHBDD3-201ENST00000216085 EPHX2P34913 555 aa24.47■■□□□ 1.51
RHBDD3-201ENST00000216085 EVI5LQ96CN4 794 aa24.47■■□□□ 1.51
RHBDD3-201ENST00000216085 ANTXR1Q9H6X2 564 aa24.47■■□□□ 1.51
RHBDD3-201ENST00000216085 LDHCP07864 332 aa24.46■■□□□ 1.51
RHBDD3-201ENST00000216085 EPS15P42566 896 aa24.46■■□□□ 1.51
RHBDD3-201ENST00000216085 NAA16Q6N069 864 aaPredicted RBP24.46■■□□□ 1.51
RHBDD3-201ENST00000216085 PNMA8AQ86V59 439 aaPredicted RBP24.46■■□□□ 1.51
RHBDD3-201ENST00000216085 MRIQ9BWK5 157 aa24.46■■□□□ 1.51
RHBDD3-201ENST00000216085 MAST2Q6P0Q8 1798 aa24.46■■□□□ 1.51
RHBDD3-201ENST00000216085 RGS3P49796 1198 aa24.45■■□□□ 1.5
RHBDD3-201ENST00000216085 MECOMQ03112 1051 aa24.45■■□□□ 1.5
RHBDD3-201ENST00000216085 DLGAP5Q15398 846 aa24.45■■□□□ 1.5
RHBDD3-201ENST00000216085 GRIK5Q16478 980 aa24.45■■□□□ 1.5
RHBDD3-201ENST00000216085 KIF4BQ2VIQ3 1234 aa24.45■■□□□ 1.5
RHBDD3-201ENST00000216085 KBTBD3Q8NAB2 608 aa24.45■■□□□ 1.5
RHBDD3-201ENST00000216085 EDC3Q96F86 508 aaKnown RBP24.45■■□□□ 1.5
RHBDD3-201ENST00000216085 RRAGCQ9HB90 399 aa24.45■■□□□ 1.5
RHBDD3-201ENST00000216085 MAP4K4O95819 1239 aaPredicted RBP24.44■■□□□ 1.5
RHBDD3-201ENST00000216085 CRKP46108 304 aa24.44■■□□□ 1.5
RHBDD3-201ENST00000216085 TTC22Q5TAA0 569 aa24.44■■□□□ 1.5
RHBDD3-201ENST00000216085 HHIPL2Q6UWX4 724 aa24.44■■□□□ 1.5
RHBDD3-201ENST00000216085 USP50Q70EL3 339 aaPredicted RBP24.44■■□□□ 1.5
RHBDD3-201ENST00000216085 NSUN4Q96CB9 384 aaKnown RBP24.44■■□□□ 1.5
RHBDD3-201ENST00000216085 NOL10Q9BSC4 688 aaKnown RBP24.44■■□□□ 1.5
RHBDD3-201ENST00000216085 FSD1Q9BTV5 496 aa24.44■■□□□ 1.5
RHBDD3-201ENST00000216085 DOCK2Q92608 1830 aa24.44■■□□□ 1.5
RHBDD3-201ENST00000216085 TAF1DQ9H5J8 278 aaPredicted RBP24.44■■□□□ 1.5
RHBDD3-201ENST00000216085 MYO1BO43795 1136 aa24.43■■□□□ 1.5
RHBDD3-201ENST00000216085 CFAP100Q494V2 611 aa24.43■■□□□ 1.5
RHBDD3-201ENST00000216085 TBC1D10BQ4KMP7 808 aaPredicted RBP24.43■■□□□ 1.5
RHBDD3-201ENST00000216085 NMRK2Q9NPI5 230 aa24.43■■□□□ 1.5
RHBDD3-201ENST00000216085 SHTN1A0MZ66 631 aa24.42■■□□□ 1.5
RHBDD3-201ENST00000216085 RBM26Q5T8P6 1007 aaKnown RBP24.42■■□□□ 1.5
RHBDD3-201ENST00000216085 SLC9C2Q5TAH2 1124 aa24.42■■□□□ 1.5
RHBDD3-201ENST00000216085 SAMD7Q7Z3H4 446 aa24.42■■□□□ 1.5
RHBDD3-201ENST00000216085 MAGEB6Q8N7X4 407 aa24.42■■□□□ 1.5
RHBDD3-201ENST00000216085 MTMR14Q8NCE2 650 aa24.42■■□□□ 1.5
RHBDD3-201ENST00000216085 RILPL2Q969X0 211 aa24.42■■□□□ 1.5
RHBDD3-201ENST00000216085 ZFYP08048 801 aaPredicted RBP24.42■■□□□ 1.5
RHBDD3-201ENST00000216085 DIXDC1Q155Q3 683 aa24.42■■□□□ 1.5
RHBDD3-201ENST00000216085 TICAM2Q86XR7 235 aa24.42■■□□□ 1.5
RHBDD3-201ENST00000216085 MROH7-TTC4A0A0A0MT08 1334 aa24.41■■□□□ 1.5
RHBDD3-201ENST00000216085 ZDHHC15Q96MV8 337 aa24.41■■□□□ 1.5
RHBDD3-201ENST00000216085 POTECB2RU33 542 aa24.4■■□□□ 1.5
RHBDD3-201ENST00000216085 EAPPQ56P03 285 aaPredicted RBP24.4■■□□□ 1.5
RHBDD3-201ENST00000216085 CERS3Q8IU89 383 aa24.4■■□□□ 1.5
RHBDD3-201ENST00000216085 FAM163AQ96GL9 167 aaPredicted RBP24.4■■□□□ 1.5
RHBDD3-201ENST00000216085 SPDYE2BA6NHP3 402 aa24.39■■□□□ 1.5
RHBDD3-201ENST00000216085 BAG3O95817 575 aa24.39■■□□□ 1.5
RHBDD3-201ENST00000216085 SPDYE6P0CI01 402 aa24.39■■□□□ 1.5
RHBDD3-201ENST00000216085 PDE6AP16499 860 aa24.39■■□□□ 1.5
RHBDD3-201ENST00000216085 CYP7A1P22680 504 aa24.39■■□□□ 1.5
RHBDD3-201ENST00000216085 GAKO14976 1311 aa24.39■■□□□ 1.5
RHBDD3-201ENST00000216085 RFX7Q2KHR2 1363 aa24.39■■□□□ 1.5
RHBDD3-201ENST00000216085 ZNF784Q8NCA9 323 aaPredicted RBP24.39■■□□□ 1.49
RHBDD3-201ENST00000216085 TRPM4Q8TD43 1214 aa24.39■■□□□ 1.49
RHBDD3-201ENST00000216085 DAGLAQ9Y4D2 1042 aa24.39■■□□□ 1.49
RHBDD3-201ENST00000216085 UBE3CQ15386 1083 aa24.38■■□□□ 1.49
RHBDD3-201ENST00000216085 TMOD2Q9NZR1 351 aa24.38■■□□□ 1.49
RHBDD3-201ENST00000216085 MYH2Q9UKX2 1941 aa24.38■■□□□ 1.49
RHBDD3-201ENST00000216085 WNT10BO00744 389 aa24.37■■□□□ 1.49
RHBDD3-201ENST00000216085 GSPT1P15170 499 aaKnown RBP24.37■■□□□ 1.49
RHBDD3-201ENST00000216085 ADD2P35612 726 aa24.37■■□□□ 1.49
RHBDD3-201ENST00000216085 ZC3H15Q8WU90 426 aaKnown RBP24.37■■□□□ 1.49
RHBDD3-201ENST00000216085 ZNF532Q9HCE3 1301 aa24.37■■□□□ 1.49
RHBDD3-201ENST00000216085 MYO5AQ9Y4I1 1855 aaKnown RBP24.37■■□□□ 1.49
RHBDD3-201ENST00000216085 HIP1O00291 1037 aa24.37■■□□□ 1.49
RHBDD3-201ENST00000216085 PLCG2P16885 1265 aa24.37■■□□□ 1.49
RHBDD3-201ENST00000216085 BMP2KLQ5H9B9 411 aa24.37■■□□□ 1.49
RHBDD3-201ENST00000216085 SKAP1Q86WV1 359 aa24.37■■□□□ 1.49
RHBDD3-201ENST00000216085 MYH7P12883 1935 aa24.36■■□□□ 1.49
RHBDD3-201ENST00000216085 RNF113AO15541 343 aaKnown RBP24.36■■□□□ 1.49
RHBDD3-201ENST00000216085 BTDP43251 543 aa24.36■■□□□ 1.49
RHBDD3-201ENST00000216085 CLEC11AQ9Y240 323 aa24.36■■□□□ 1.49
RHBDD3-201ENST00000216085 GPR75-ASB3A0A0A6YYF3 556 aa24.35■■□□□ 1.49
RHBDD3-201ENST00000216085 EGFRP00533 1210 aa24.35■■□□□ 1.49
RHBDD3-201ENST00000216085 NBPF9Q3BBW0 867 aa24.35■■□□□ 1.49
RHBDD3-201ENST00000216085 LDHDQ86WU2 507 aa24.35■■□□□ 1.49
RHBDD3-201ENST00000216085 ZNF384Q8TF68 577 aa24.35■■□□□ 1.49
RHBDD3-201ENST00000216085 ZBED3Q96IU2 234 aaPredicted RBP24.35■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms