RNA–Protein interactions for RNA: ENST00000194152.3

PCDHB4-201, Transcript of protocadherin beta 4, humanhuman

APPRIS P1 BASIC

Gene PCDHB4, Length 3,825 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB4-201ENST00000194152 USPL1Q5W0Q7 1092 aa14.98□□□□□ -0.01
PCDHB4-201ENST00000194152 INTS4Q96HW7 963 aaKnown RBP14.98□□□□□ -0.01
PCDHB4-201ENST00000194152 UIMC1Q96RL1 719 aa14.98□□□□□ -0.01
PCDHB4-201ENST00000194152 HMG20BQ9P0W2 317 aa14.98□□□□□ -0.01
PCDHB4-201ENST00000194152 PEAK1Q9H792 1746 aa14.97□□□□□ -0.01
PCDHB4-201ENST00000194152 ARHGAP23Q9P227 1491 aa14.97□□□□□ -0.01
PCDHB4-201ENST00000194152 ZSCAN25Q6NSZ9 544 aa14.97□□□□□ -0.01
PCDHB4-201ENST00000194152 TTC6Q86TZ1 520 aa14.97□□□□□ -0.01
PCDHB4-201ENST00000194152 AK7Q96M32 723 aa14.97□□□□□ -0.01
PCDHB4-201ENST00000194152 CCNL1Q9UK58 526 aaPredicted RBP14.97□□□□□ -0.01
PCDHB4-201ENST00000194152 ATG9AQ7Z3C6 839 aa14.97□□□□□ -0.01
PCDHB4-201ENST00000194152 DZIP1Q86YF9 867 aaKnown RBP14.97□□□□□ -0.01
PCDHB4-201ENST00000194152 NOL10Q9BSC4 688 aaKnown RBP14.97□□□□□ -0.01
PCDHB4-201ENST00000194152 PTF1AQ7RTS3 328 aa14.97□□□□□ -0.01
PCDHB4-201ENST00000194152 AOX1Q06278 1338 aa14.97□□□□□ -0.01
PCDHB4-201ENST00000194152 SCRN1Q12765 414 aa14.96□□□□□ -0.01
PCDHB4-201ENST00000194152 MFSD6Q6ZSS7 791 aa14.96□□□□□ -0.01
PCDHB4-201ENST00000194152 RBM5P52756 815 aaKnown RBP eCLIP14.96□□□□□ -0.01
PCDHB4-201ENST00000194152 LRMPQ12912 555 aa14.96□□□□□ -0.01
PCDHB4-201ENST00000194152 MTX1Q13505 466 aa14.96□□□□□ -0.01
PCDHB4-201ENST00000194152 VIRMAQ69YN4 1812 aaKnown RBP14.96□□□□□ -0.01
PCDHB4-201ENST00000194152 SCAND2PQ9GZW5 306 aaPredicted RBP14.96□□□□□ -0.01
PCDHB4-201ENST00000194152 TMX4Q9H1E5 349 aaPredicted RBP14.96□□□□□ -0.01
PCDHB4-201ENST00000194152 MCAMP43121 646 aa14.96□□□□□ -0.02
PCDHB4-201ENST00000194152 USP5P45974 858 aa14.96□□□□□ -0.02
PCDHB4-201ENST00000194152 DHX8Q14562 1220 aaKnown RBP14.96□□□□□ -0.02
PCDHB4-201ENST00000194152 ANO6Q4KMQ2 910 aa14.96□□□□□ -0.02
PCDHB4-201ENST00000194152 FAM177A1Q8N128 213 aaPredicted RBP14.96□□□□□ -0.02
PCDHB4-201ENST00000194152 NLRP3Q96P20 1036 aa14.96□□□□□ -0.02
PCDHB4-201ENST00000194152 ALG1Q9BT22 464 aa14.96□□□□□ -0.02
PCDHB4-201ENST00000194152 ST7Q9NRC1 585 aa14.96□□□□□ -0.02
PCDHB4-201ENST00000194152 CFAP45Q9UL16 551 aa14.96□□□□□ -0.02
PCDHB4-201ENST00000194152 C10orf67Q8IYJ2 551 aa14.95□□□□□ -0.02
PCDHB4-201ENST00000194152 CDC5LQ99459 802 aaKnown RBP14.95□□□□□ -0.02
PCDHB4-201ENST00000194152 PIH1D3Q9NQM4 214 aaKnown RBP14.95□□□□□ -0.02
PCDHB4-201ENST00000194152 KLHL10Q6JEL2 608 aa14.95□□□□□ -0.02
PCDHB4-201ENST00000194152 STOX1Q6ZVD7 989 aa14.95□□□□□ -0.02
PCDHB4-201ENST00000194152 ZNF396Q96N95 335 aaPredicted RBP14.95□□□□□ -0.02
PCDHB4-201ENST00000194152 STX8Q9UNK0 236 aa14.95□□□□□ -0.02
PCDHB4-201ENST00000194152 DLG5Q8TDM6 1919 aa14.95□□□□□ -0.02
PCDHB4-201ENST00000194152 PCCAP05165 728 aaPredicted RBP14.95□□□□□ -0.02
PCDHB4-201ENST00000194152 IARSP41252 1262 aaKnown RBP14.95□□□□□ -0.02
PCDHB4-201ENST00000194152 PTPN21Q16825 1174 aa14.95□□□□□ -0.02
PCDHB4-201ENST00000194152 GPATCH11Q8N954 259 aa14.95□□□□□ -0.02
PCDHB4-201ENST00000194152 AATFQ9NY61 560 aaKnown RBP eCLIP14.95□□□□□ -0.02
PCDHB4-201ENST00000194152 USP21Q9UK80 565 aa14.95□□□□□ -0.02
PCDHB4-201ENST00000194152 ERFEQ4G0M1 354 aa14.94□□□□□ -0.02
PCDHB4-201ENST00000194152 ZNF165P49910 485 aa14.94□□□□□ -0.02
PCDHB4-201ENST00000194152 GABPB1Q06547 395 aaPredicted RBP14.94□□□□□ -0.02
PCDHB4-201ENST00000194152 APPBP2Q92624 585 aa14.94□□□□□ -0.02
PCDHB4-201ENST00000194152 SLIT1O75093 1534 aa14.94□□□□□ -0.02
PCDHB4-201ENST00000194152 SALL3Q9BXA9 1300 aa14.94□□□□□ -0.02
PCDHB4-201ENST00000194152 MARCH6O60337 910 aa14.94□□□□□ -0.02
PCDHB4-201ENST00000194152 TRIM22Q8IYM9 498 aa14.94□□□□□ -0.02
PCDHB4-201ENST00000194152 SPATA5Q8NB90 893 aa14.94□□□□□ -0.02
PCDHB4-201ENST00000194152 SAP30BPQ9UHR5 308 aaKnown RBP14.94□□□□□ -0.02
PCDHB4-201ENST00000194152 KCNJ14Q9UNX9 436 aa14.94□□□□□ -0.02
PCDHB4-201ENST00000194152 ZBTB43O43298 467 aa14.93□□□□□ -0.02
PCDHB4-201ENST00000194152 PDE8BO95263 885 aa14.93□□□□□ -0.02
PCDHB4-201ENST00000194152 PDE6AP16499 860 aa14.93□□□□□ -0.02
PCDHB4-201ENST00000194152 CYP19A1P11511 503 aaPredicted RBP14.93□□□□□ -0.02
PCDHB4-201ENST00000194152 RFX5P48382 616 aaPredicted RBP14.93□□□□□ -0.02
PCDHB4-201ENST00000194152 NCBP1Q09161 790 aaKnown RBP14.93□□□□□ -0.02
PCDHB4-201ENST00000194152 CUL4AQ13619 759 aa14.93□□□□□ -0.02
PCDHB4-201ENST00000194152 TOB2Q14106 344 aaPredicted RBP14.93□□□□□ -0.02
PCDHB4-201ENST00000194152 TEX35Q5T0J7 233 aa14.93□□□□□ -0.02
PCDHB4-201ENST00000194152 MSL1Q68DK7 614 aa14.93□□□□□ -0.02
PCDHB4-201ENST00000194152 NAA16Q6N069 864 aaPredicted RBP14.93□□□□□ -0.02
PCDHB4-201ENST00000194152 MST1RQ04912 1400 aa14.93□□□□□ -0.02
PCDHB4-201ENST00000194152 PUM3Q15397 648 aaKnown RBP14.93□□□□□ -0.02
PCDHB4-201ENST00000194152 RTCBQ9Y3I0 505 aaKnown RBP14.93□□□□□ -0.02
PCDHB4-201ENST00000194152 FAM47AQ5JRC9 791 aa14.92□□□□□ -0.02
PCDHB4-201ENST00000194152 MKNK2Q9HBH9 465 aa14.92□□□□□ -0.02
PCDHB4-201ENST00000194152 NR1I2O75469 434 aa14.92□□□□□ -0.02
PCDHB4-201ENST00000194152 HMGB1P09429 215 aaKnown RBP14.92□□□□□ -0.02
PCDHB4-201ENST00000194152 DYNLL1P63167 89 aaKnown RBP14.92□□□□□ -0.02
PCDHB4-201ENST00000194152 CHRNDQ07001 517 aa14.92□□□□□ -0.02
PCDHB4-201ENST00000194152 PICALMQ13492 652 aa14.92□□□□□ -0.02
PCDHB4-201ENST00000194152 ZSCAN29Q8IWY8 852 aaPredicted RBP14.92□□□□□ -0.02
PCDHB4-201ENST00000194152 MARCH10Q8NA82 808 aaPredicted RBP14.92□□□□□ -0.02
PCDHB4-201ENST00000194152 RPGRQ92834 1020 aaKnown RBP14.91□□□□□ -0.02
PCDHB4-201ENST00000194152 USP28Q96RU2 1077 aa14.91□□□□□ -0.02
PCDHB4-201ENST00000194152 TSPY2A6NKD2 308 aa14.91□□□□□ -0.02
PCDHB4-201ENST00000194152 CYP2E1P05181 493 aaPredicted RBP14.91□□□□□ -0.02
PCDHB4-201ENST00000194152 EIF6P56537 245 aaKnown RBP14.91□□□□□ -0.02
PCDHB4-201ENST00000194152 LEO1Q8WVC0 666 aaPredicted RBP14.91□□□□□ -0.02
PCDHB4-201ENST00000194152 TTC14Q96N46 770 aa14.91□□□□□ -0.02
PCDHB4-201ENST00000194152 SLC4A9Q96Q91 983 aa14.91□□□□□ -0.02
PCDHB4-201ENST00000194152 RSPH14Q9UHP6 348 aa14.91□□□□□ -0.02
PCDHB4-201ENST00000194152 RASGRF1Q13972 1273 aa14.91□□□□□ -0.02
PCDHB4-201ENST00000194152 TERF2Q15554 542 aa14.91□□□□□ -0.02
PCDHB4-201ENST00000194152 ELF2Q15723 593 aa14.91□□□□□ -0.02
PCDHB4-201ENST00000194152 HELLSQ9NRZ9 838 aa14.91□□□□□ -0.02
PCDHB4-201ENST00000194152 IKQ13123 557 aaPredicted RBP14.9□□□□□ -0.02
PCDHB4-201ENST00000194152 WTAPQ15007 396 aa14.9□□□□□ -0.02
PCDHB4-201ENST00000194152 ZNF622Q969S3 477 aaKnown RBP eCLIP14.9□□□□□ -0.02
PCDHB4-201ENST00000194152 NAT10Q9H0A0 1025 aaKnown RBP14.9□□□□□ -0.02
PCDHB4-201ENST00000194152 NCOA3Q9Y6Q9 1424 aa14.9□□□□□ -0.02
PCDHB4-201ENST00000194152 ITPK1Q13572 414 aa14.9□□□□□ -0.02
PCDHB4-201ENST00000194152 UVSSAQ2YD98 709 aa14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms