RNA–Protein interactions for RNA: ENST00000006053.6

CX3CL1-201, Transcript of C-X3-C motif chemokine ligand 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CX3CL1, Length 3,321 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1-201ENST00000006053 TIGD1Q96MW7 591 aa12.16□□□□□ -0.46
CX3CL1-201ENST00000006053 PUS3Q9BZE2 481 aaKnown RBP12.16□□□□□ -0.46
CX3CL1-201ENST00000006053 POLR3EQ9NVU0 708 aa12.16□□□□□ -0.46
CX3CL1-201ENST00000006053 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.16□□□□□ -0.46
CX3CL1-201ENST00000006053 KDM6AO15550 1401 aaPredicted RBP12.16□□□□□ -0.46
CX3CL1-201ENST00000006053 PSDA5PKW4 1024 aaPredicted RBP12.16□□□□□ -0.46
CX3CL1-201ENST00000006053 DHX16O60231 1041 aaKnown RBP12.16□□□□□ -0.46
CX3CL1-201ENST00000006053 IL15P40933 162 aaPredicted RBP12.16□□□□□ -0.46
CX3CL1-201ENST00000006053 NCAPHQ15003 741 aa12.16□□□□□ -0.46
CX3CL1-201ENST00000006053 CFAP100Q494V2 611 aa12.16□□□□□ -0.46
CX3CL1-201ENST00000006053 RALYLQ86SE5 291 aaKnown RBP12.16□□□□□ -0.46
CX3CL1-201ENST00000006053 IFNL2Q8IZJ0 200 aa12.16□□□□□ -0.46
CX3CL1-201ENST00000006053 PLBD2Q8NHP8 589 aa12.16□□□□□ -0.46
CX3CL1-201ENST00000006053 CCDC85AQ96PX6 553 aaPredicted RBP12.16□□□□□ -0.46
CX3CL1-201ENST00000006053 CCDC66A2RUB6 948 aa12.16□□□□□ -0.46
CX3CL1-201ENST00000006053 UBASH3AP57075 661 aa12.16□□□□□ -0.46
CX3CL1-201ENST00000006053 GNL2Q13823 731 aaKnown RBP12.16□□□□□ -0.46
CX3CL1-201ENST00000006053 BMS1Q14692 1282 aaKnown RBP12.16□□□□□ -0.46
CX3CL1-201ENST00000006053 HSP90AA4PQ58FG1 418 aa12.16□□□□□ -0.46
CX3CL1-201ENST00000006053 KRT28Q7Z3Y7 464 aa12.16□□□□□ -0.46
CX3CL1-201ENST00000006053 AIFM3Q96NN9 605 aa12.16□□□□□ -0.46
CX3CL1-201ENST00000006053 L2HGDHQ9H9P8 463 aa12.16□□□□□ -0.46
CX3CL1-201ENST00000006053 KCND1Q9NSA2 647 aa12.16□□□□□ -0.46
CX3CL1-201ENST00000006053 URI1O94763 535 aaPredicted RBP12.15□□□□□ -0.46
CX3CL1-201ENST00000006053 SYKP43405 635 aa12.15□□□□□ -0.46
CX3CL1-201ENST00000006053 CLCN6P51797 869 aa12.15□□□□□ -0.46
CX3CL1-201ENST00000006053 TTLL7Q6ZT98 887 aa12.15□□□□□ -0.46
CX3CL1-201ENST00000006053 DPF2Q92785 391 aa12.15□□□□□ -0.46
CX3CL1-201ENST00000006053 BPIFA3Q9BQP9 254 aa12.15□□□□□ -0.46
CX3CL1-201ENST00000006053 ZBTB3Q9H5J0 574 aa12.15□□□□□ -0.46
CX3CL1-201ENST00000006053 EYA2O00167 538 aa12.15□□□□□ -0.46
CX3CL1-201ENST00000006053 WDHD1O75717 1129 aaPredicted RBP12.15□□□□□ -0.46
CX3CL1-201ENST00000006053 FGAP02671 866 aa12.15□□□□□ -0.46
CX3CL1-201ENST00000006053 RXRAP19793 462 aa12.15□□□□□ -0.46
CX3CL1-201ENST00000006053 CABP4P57796 275 aa12.15□□□□□ -0.46
CX3CL1-201ENST00000006053 CHRNA2Q15822 529 aa12.15□□□□□ -0.46
CX3CL1-201ENST00000006053 TTC39AQ5SRH9 613 aa12.15□□□□□ -0.46
CX3CL1-201ENST00000006053 MNS1Q8NEH6 495 aa12.15□□□□□ -0.46
CX3CL1-201ENST00000006053 UBXN4Q92575 508 aa12.15□□□□□ -0.46
CX3CL1-201ENST00000006053 UTP14AQ9BVJ6 771 aaKnown RBP12.15□□□□□ -0.46
CX3CL1-201ENST00000006053 NEDD4P46934 1319 aa12.15□□□□□ -0.46
CX3CL1-201ENST00000006053 TNNT3P45378 269 aaPredicted RBP12.14□□□□□ -0.47
CX3CL1-201ENST00000006053 BRAPQ7Z569 592 aa12.14□□□□□ -0.47
CX3CL1-201ENST00000006053 TMX1Q9H3N1 280 aa12.14□□□□□ -0.47
CX3CL1-201ENST00000006053 RNF216Q9NWF9 866 aaPredicted RBP12.14□□□□□ -0.47
CX3CL1-201ENST00000006053 CWC25Q9NXE8 425 aaPredicted RBP12.14□□□□□ -0.47
CX3CL1-201ENST00000006053 LAMA4Q16363 1823 aa12.14□□□□□ -0.47
CX3CL1-201ENST00000006053 ETF1P62495 437 aaKnown RBP12.14□□□□□ -0.47
CX3CL1-201ENST00000006053 KIF23Q02241 960 aaPredicted RBP12.14□□□□□ -0.47
CX3CL1-201ENST00000006053 AXDND1Q5T1B0 1012 aaPredicted RBP12.14□□□□□ -0.47
CX3CL1-201ENST00000006053 CEP126Q9P2H0 1117 aa12.14□□□□□ -0.47
CX3CL1-201ENST00000006053 HPS5Q9UPZ3 1129 aa12.14□□□□□ -0.47
CX3CL1-201ENST00000006053 MROH7-TTC4A0A0A0MT08 1334 aa12.14□□□□□ -0.47
CX3CL1-201ENST00000006053 H7C1W4 665 aa12.14□□□□□ -0.47
CX3CL1-201ENST00000006053 MYCNP04198 464 aaPredicted RBP12.14□□□□□ -0.47
CX3CL1-201ENST00000006053 CMA1P23946 247 aa12.14□□□□□ -0.47
CX3CL1-201ENST00000006053 ADORA1P30542 326 aa12.14□□□□□ -0.47
CX3CL1-201ENST00000006053 PNOCQ13519 176 aa12.14□□□□□ -0.47
CX3CL1-201ENST00000006053 NOL10Q9BSC4 688 aaKnown RBP12.14□□□□□ -0.47
CX3CL1-201ENST00000006053 H2AFXP16104 143 aaPredicted RBP12.13□□□□□ -0.47
CX3CL1-201ENST00000006053 CCDC93Q567U6 631 aa12.13□□□□□ -0.47
CX3CL1-201ENST00000006053 CCDC158Q5M9N0 1113 aa12.13□□□□□ -0.47
CX3CL1-201ENST00000006053 NCOA7Q8NI08 942 aa12.13□□□□□ -0.47
CX3CL1-201ENST00000006053 CNKSR2Q8WXI2 1034 aa12.13□□□□□ -0.47
CX3CL1-201ENST00000006053 ZNF330Q9Y3S2 320 aaPredicted RBP12.13□□□□□ -0.47
CX3CL1-201ENST00000006053 C5P01031 1676 aa12.13□□□□□ -0.47
CX3CL1-201ENST00000006053 CLIC6Q96NY7 704 aa12.13□□□□□ -0.47
CX3CL1-201ENST00000006053 BCCIPQ9P287 314 aaKnown RBP eCLIP12.13□□□□□ -0.47
CX3CL1-201ENST00000006053 TMEM232C9JQI7 657 aa12.13□□□□□ -0.47
CX3CL1-201ENST00000006053 ZNF213O14771 459 aa12.13□□□□□ -0.47
CX3CL1-201ENST00000006053 CYP27B1O15528 508 aa12.13□□□□□ -0.47
CX3CL1-201ENST00000006053 TOP1P11387 765 aaKnown RBP12.13□□□□□ -0.47
CX3CL1-201ENST00000006053 ANTXR2P58335 489 aa12.13□□□□□ -0.47
CX3CL1-201ENST00000006053 PDILTQ8N807 584 aa12.13□□□□□ -0.47
CX3CL1-201ENST00000006053 ALG1Q9BT22 464 aa12.13□□□□□ -0.47
CX3CL1-201ENST00000006053 CARD6Q9BX69 1037 aa12.13□□□□□ -0.47
CX3CL1-201ENST00000006053 PUS7LQ9H0K6 701 aaKnown RBP12.13□□□□□ -0.47
CX3CL1-201ENST00000006053 GPR108Q9NPR9 543 aa12.13□□□□□ -0.47
CX3CL1-201ENST00000006053 FAM53CQ9NYF3 392 aa12.13□□□□□ -0.47
CX3CL1-201ENST00000006053 DENND2AQ9ULE3 1009 aa12.13□□□□□ -0.47
CX3CL1-201ENST00000006053 MYH15Q9Y2K3 1946 aa12.13□□□□□ -0.47
CX3CL1-201ENST00000006053 TMCO3Q6UWJ1 677 aa12.12□□□□□ -0.47
CX3CL1-201ENST00000006053 PI16Q6UXB8 463 aa12.12□□□□□ -0.47
CX3CL1-201ENST00000006053 MB21D2Q8IYB1 491 aaPredicted RBP12.12□□□□□ -0.47
CX3CL1-201ENST00000006053 NBPF26B4DH59 902 aa12.12□□□□□ -0.47
CX3CL1-201ENST00000006053 POLR3GO15318 223 aaPredicted RBP12.12□□□□□ -0.47
CX3CL1-201ENST00000006053 A1BGP04217 495 aa12.12□□□□□ -0.47
CX3CL1-201ENST00000006053 EVCP57679 992 aa12.12□□□□□ -0.47
CX3CL1-201ENST00000006053 MYL5Q02045 173 aa12.12□□□□□ -0.47
CX3CL1-201ENST00000006053 SLC39A14Q15043 492 aa12.12□□□□□ -0.47
CX3CL1-201ENST00000006053 NBPF14Q5TI25 921 aa12.12□□□□□ -0.47
CX3CL1-201ENST00000006053 NBPF10Q6P3W6 841 aaKnown RBP12.12□□□□□ -0.47
CX3CL1-201ENST00000006053 OLFM4Q6UX06 510 aa12.12□□□□□ -0.47
CX3CL1-201ENST00000006053 NBPF15Q8N660 670 aa12.12□□□□□ -0.47
CX3CL1-201ENST00000006053 PHKBQ93100 1093 aa12.12□□□□□ -0.47
CX3CL1-201ENST00000006053 DCAF5Q96JK2 942 aa12.12□□□□□ -0.47
CX3CL1-201ENST00000006053 EPC1Q9H2F5 836 aa12.12□□□□□ -0.47
CX3CL1-201ENST00000006053 ARGLU1Q9NWB6 273 aaPredicted RBP12.12□□□□□ -0.47
CX3CL1-201ENST00000006053 FHOD1Q9Y613 1164 aa12.12□□□□□ -0.47
CX3CL1-201ENST00000006053 IKBKBO14920 756 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms