RNA–Protein interactions for RNA: ENST00000641411.1

CASC19-227, Transcript of cancer susceptibility 19, humanhuman

BASIC

Gene CASC19, Length 1,285 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC19-227ENST00000641411 PDLIM3Q53GG5 364 aaPredicted RBP6.27□□□□□ -1.41
CASC19-227ENST00000641411 PRR30Q53SZ7 412 aaPredicted RBP6.27□□□□□ -1.41
CASC19-227ENST00000641411 SPRNQ5BIV9 151 aa6.27□□□□□ -1.41
CASC19-227ENST00000641411 Q6ZRM9 215 aa6.27□□□□□ -1.41
CASC19-227ENST00000641411 ODF3L1Q8IXM7 274 aa6.27□□□□□ -1.41
CASC19-227ENST00000641411 PUSL1Q8N0Z8 303 aaKnown RBP6.27□□□□□ -1.41
CASC19-227ENST00000641411 TCTEX1D2Q8WW35 142 aa6.27□□□□□ -1.41
CASC19-227ENST00000641411 BSCL2Q96G97 398 aaPredicted RBP6.27□□□□□ -1.41
CASC19-227ENST00000641411 WFIKKN1Q96NZ8 548 aa6.27□□□□□ -1.41
CASC19-227ENST00000641411 MS4A5Q9H3V2 200 aa6.27□□□□□ -1.41
CASC19-227ENST00000641411 CTNNBIP1Q9NSA3 81 aaPredicted RBP6.27□□□□□ -1.41
CASC19-227ENST00000641411 GNG12Q9UBI6 72 aa6.27□□□□□ -1.41
CASC19-227ENST00000641411 KAAG1Q9UBP8 84 aa6.27□□□□□ -1.41
CASC19-227ENST00000641411 RNF150Q9ULK6 438 aa6.27□□□□□ -1.41
CASC19-227ENST00000641411 PSG11Q9UQ72 335 aa6.27□□□□□ -1.41
CASC19-227ENST00000641411 PRELID3BQ9Y3B1 194 aa6.27□□□□□ -1.41
CASC19-227ENST00000641411 LINC00312Q9Y6C7 94 aa6.27□□□□□ -1.41
CASC19-227ENST00000641411 USF3Q68DE3 2245 aa6.26□□□□□ -1.41
CASC19-227ENST00000641411 CACNA1DQ01668 2161 aa6.26□□□□□ -1.41
CASC19-227ENST00000641411 IGHV3OR15-7A0A075B7D8 119 aa6.26□□□□□ -1.41
CASC19-227ENST00000641411 hADV38S2A0JD32 116 aa6.26□□□□□ -1.41
CASC19-227ENST00000641411 TMEM178BH3BS89 294 aa6.26□□□□□ -1.41
CASC19-227ENST00000641411 TNFRSF13BO14836 293 aaPredicted RBP6.26□□□□□ -1.41
CASC19-227ENST00000641411 PPIHO43447 177 aaKnown RBP6.26□□□□□ -1.41
CASC19-227ENST00000641411 CD5P06127 495 aa6.26□□□□□ -1.41
CASC19-227ENST00000641411 APOBEC3AP31941 199 aaPredicted RBP6.26□□□□□ -1.41
CASC19-227ENST00000641411 BRWD1-AS2P59051 145 aa6.26□□□□□ -1.41
CASC19-227ENST00000641411 UBE2KP61086 200 aa6.26□□□□□ -1.41
CASC19-227ENST00000641411 RPL30P62888 115 aaKnown RBP6.26□□□□□ -1.41
CASC19-227ENST00000641411 SUMO1P63165 101 aaKnown RBP6.26□□□□□ -1.41
CASC19-227ENST00000641411 TLE1Q04724 770 aa6.26□□□□□ -1.41
CASC19-227ENST00000641411 EDDM3AQ14507 147 aa6.26□□□□□ -1.41
CASC19-227ENST00000641411 POU2AF1Q16633 256 aa6.26□□□□□ -1.41
CASC19-227ENST00000641411 ATP6V1FQ16864 119 aa6.26□□□□□ -1.41
CASC19-227ENST00000641411 C17orf58Q2M2W7 97 aa6.26□□□□□ -1.41
CASC19-227ENST00000641411 TMEM14EPQ6UXP3 125 aa6.26□□□□□ -1.41
CASC19-227ENST00000641411 C8orf31Q8N9H6 132 aa6.26□□□□□ -1.41
CASC19-227ENST00000641411 ZNRF1Q8ND25 227 aa6.26□□□□□ -1.41
CASC19-227ENST00000641411 ZNF439Q8NDP4 499 aa6.26□□□□□ -1.41
CASC19-227ENST00000641411 BPIFCQ8NFQ6 507 aa6.26□□□□□ -1.41
CASC19-227ENST00000641411 OR5C1Q8NGR4 320 aa6.26□□□□□ -1.41
CASC19-227ENST00000641411 OR52E5Q8NH55 327 aa6.26□□□□□ -1.41
CASC19-227ENST00000641411 GPHA2Q96T91 129 aa6.26□□□□□ -1.41
CASC19-227ENST00000641411 PSMG3Q9BT73 122 aaPredicted RBP6.26□□□□□ -1.41
CASC19-227ENST00000641411 ABHD14AQ9BUJ0 271 aa6.26□□□□□ -1.41
CASC19-227ENST00000641411 SEC11CQ9BY50 192 aa6.26□□□□□ -1.41
CASC19-227ENST00000641411 SMIM3Q9BZL3 60 aa6.26□□□□□ -1.41
CASC19-227ENST00000641411 MAGT1Q9H0U3 335 aa6.26□□□□□ -1.41
CASC19-227ENST00000641411 IFI27L2Q9H2X8 130 aa6.26□□□□□ -1.41
CASC19-227ENST00000641411 NARFLQ9H6Q4 476 aa6.26□□□□□ -1.41
CASC19-227ENST00000641411 SAP30LQ9HAJ7 183 aa6.26□□□□□ -1.41
CASC19-227ENST00000641411 IDI2-AS1Q9NZ38 188 aa6.26□□□□□ -1.41
CASC19-227ENST00000641411 NDRG3Q9UGV2 375 aa6.26□□□□□ -1.41
CASC19-227ENST00000641411 RPUSD1Q9UJJ7 312 aaKnown RBP6.26□□□□□ -1.41
CASC19-227ENST00000641411 ANKRD11Q6UB99 2663 aaPredicted RBP6.26□□□□□ -1.41
CASC19-227ENST00000641411 AKAP13Q12802 2813 aa6.26□□□□□ -1.41
CASC19-227ENST00000641411 ARID1AO14497 2285 aa6.25□□□□□ -1.41
CASC19-227ENST00000641411 RAI1Q7Z5J4 1906 aaPredicted RBP6.25□□□□□ -1.41
CASC19-227ENST00000641411 TRAV1-1A0A0B4J248 108 aa6.25□□□□□ -1.41
CASC19-227ENST00000641411 TRGV8A0A0C4DH27 118 aa6.25□□□□□ -1.41
CASC19-227ENST00000641411 LINC00473A8K010 186 aa6.25□□□□□ -1.41
CASC19-227ENST00000641411 C17orf98A8MV24 154 aa6.25□□□□□ -1.41
CASC19-227ENST00000641411 SOX15O60248 233 aa6.25□□□□□ -1.41
CASC19-227ENST00000641411 RAMP3O60896 148 aa6.25□□□□□ -1.41
CASC19-227ENST00000641411 NDUFS6O75380 124 aaKnown RBP6.25□□□□□ -1.41
CASC19-227ENST00000641411 S1PR2O95136 353 aa6.25□□□□□ -1.41
CASC19-227ENST00000641411 CYB5R3P00387 301 aaPredicted RBP6.25□□□□□ -1.41
CASC19-227ENST00000641411 IFNA5P01569 189 aa6.25□□□□□ -1.41
CASC19-227ENST00000641411 ATP6V0CP27449 155 aa6.25□□□□□ -1.41
CASC19-227ENST00000641411 THBS3P49746 956 aa6.25□□□□□ -1.41
CASC19-227ENST00000641411 DYNLT3P51808 116 aa6.25□□□□□ -1.41
CASC19-227ENST00000641411 DVL1P1P54792 670 aaPredicted RBP6.25□□□□□ -1.41
CASC19-227ENST00000641411 EDDM3BP56851 147 aa6.25□□□□□ -1.41
CASC19-227ENST00000641411 SP5Q6BEB4 398 aaPredicted RBP6.25□□□□□ -1.41
CASC19-227ENST00000641411 DHRS7BQ6IAN0 325 aaPredicted RBP6.25□□□□□ -1.41
CASC19-227ENST00000641411 FAM71F2Q6NXP2 309 aa6.25□□□□□ -1.41
CASC19-227ENST00000641411 Q6ZRG5 221 aa6.25□□□□□ -1.41
CASC19-227ENST00000641411 SLC25A48Q6ZT89 311 aaKnown RBP6.25□□□□□ -1.41
CASC19-227ENST00000641411 TCF23Q7RTU1 214 aa6.25□□□□□ -1.41
CASC19-227ENST00000641411 H2BFWTQ7Z2G1 175 aa6.25□□□□□ -1.41
CASC19-227ENST00000641411 SVBPQ8N300 66 aa6.25□□□□□ -1.41
CASC19-227ENST00000641411 TPRX1Q8N7U7 411 aa6.25□□□□□ -1.41
CASC19-227ENST00000641411 BOLLQ8N9W6 283 aaKnown RBP6.25□□□□□ -1.41
CASC19-227ENST00000641411 OR4S2Q8NH73 311 aa6.25□□□□□ -1.41
CASC19-227ENST00000641411 UBALD1Q8TB05 177 aa6.25□□□□□ -1.41
CASC19-227ENST00000641411 ZNF596Q8TC21 504 aa6.25□□□□□ -1.41
CASC19-227ENST00000641411 SUN5Q8TC36 379 aa6.25□□□□□ -1.41
CASC19-227ENST00000641411 DDB2Q92466 427 aa6.25□□□□□ -1.41
CASC19-227ENST00000641411 RAB39BQ96DA2 213 aa6.25□□□□□ -1.41
CASC19-227ENST00000641411 GAL3ST2Q9H3Q3 398 aa6.25□□□□□ -1.41
CASC19-227ENST00000641411 KCNJ16Q9NPI9 418 aa6.25□□□□□ -1.41
CASC19-227ENST00000641411 C19orf12Q9NSK7 152 aa6.25□□□□□ -1.41
CASC19-227ENST00000641411 PSENENQ9NZ42 101 aa6.25□□□□□ -1.41
CASC19-227ENST00000641411 COQ3Q9NZJ6 369 aa6.25□□□□□ -1.41
CASC19-227ENST00000641411 TIMM9Q9Y5J7 89 aa6.25□□□□□ -1.41
CASC19-227ENST00000641411 POLEQ07864 2286 aa6.25□□□□□ -1.41
CASC19-227ENST00000641411 PPIAL4EA0A075B759 164 aa6.24□□□□□ -1.41
CASC19-227ENST00000641411 TRBV23-1A0A0A0MS06 115 aa6.24□□□□□ -1.41
CASC19-227ENST00000641411 IGHV3-43A0A0B4J1X8 118 aa6.24□□□□□ -1.41
CASC19-227ENST00000641411 TMEM8BA6NDV4 472 aa6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms