RNA–Protein interactions for RNA: ENST00000640652.1

SCN3A-210, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

TSL 5

Gene SCN3A, Length 8,825 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-210ENST00000640652 GFRA1P56159 465 aa4.73□□□□□ -1.65
SCN3A-210ENST00000640652 LTC4SQ16873 150 aa4.73□□□□□ -1.65
SCN3A-210ENST00000640652 CXorf67Q86X51 503 aaPredicted RBP4.73□□□□□ -1.65
SCN3A-210ENST00000640652 TMEM171Q8WVE6 324 aa4.73□□□□□ -1.65
SCN3A-210ENST00000640652 LYZL6O75951 148 aa4.72□□□□□ -1.65
SCN3A-210ENST00000640652 WISP1O95388 367 aa4.72□□□□□ -1.65
SCN3A-210ENST00000640652 ARL14EPLP0DKL9 152 aa4.72□□□□□ -1.65
SCN3A-210ENST00000640652 AESQ08117 197 aa4.72□□□□□ -1.65
SCN3A-210ENST00000640652 FAM90A1Q86YD7 464 aa4.72□□□□□ -1.65
SCN3A-210ENST00000640652 C19orf24Q9BVV8 132 aa4.72□□□□□ -1.65
SCN3A-210ENST00000640652 HSPB7Q9UBY9 170 aa4.72□□□□□ -1.65
SCN3A-210ENST00000640652 TRAV24A0A0B4J272 114 aa4.72□□□□□ -1.65
SCN3A-210ENST00000640652 CRYAAP02489 173 aa4.72□□□□□ -1.65
SCN3A-210ENST00000640652 TNFRSF1AP19438 455 aa4.72□□□□□ -1.65
SCN3A-210ENST00000640652 UBE2G1P62253 170 aa4.72□□□□□ -1.65
SCN3A-210ENST00000640652 ZNF705AQ6ZN79 300 aaPredicted RBP4.72□□□□□ -1.65
SCN3A-210ENST00000640652 RNF2Q99496 336 aa4.72□□□□□ -1.65
SCN3A-210ENST00000640652 GAL3ST2Q9H3Q3 398 aa4.72□□□□□ -1.65
SCN3A-210ENST00000640652 ESRP2Q9H6T0 727 aaKnown RBP4.72□□□□□ -1.65
SCN3A-210ENST00000640652 CLN8Q9UBY8 286 aa4.72□□□□□ -1.65
SCN3A-210ENST00000640652 DUSP13Q9UII6 198 aa4.72□□□□□ -1.65
SCN3A-210ENST00000640652 ERVS71-1P61550 626 aa4.72□□□□□ -1.65
SCN3A-210ENST00000640652 ZADH2Q8N4Q0 377 aa4.72□□□□□ -1.65
SCN3A-210ENST00000640652 SFRP2Q96HF1 295 aa4.72□□□□□ -1.65
SCN3A-210ENST00000640652 ABHD14AQ9BUJ0 271 aa4.72□□□□□ -1.65
SCN3A-210ENST00000640652 TECRQ9NZ01 308 aaKnown RBP4.72□□□□□ -1.65
SCN3A-210ENST00000640652 PLA2G3Q9NZ20 509 aa4.72□□□□□ -1.65
SCN3A-210ENST00000640652 K7EQM0 130 aa4.72□□□□□ -1.65
SCN3A-210ENST00000640652 M0R1X1 148 aa4.72□□□□□ -1.65
SCN3A-210ENST00000640652 RAB29O14966 203 aa4.72□□□□□ -1.65
SCN3A-210ENST00000640652 FCGR3BO75015 233 aa4.72□□□□□ -1.65
SCN3A-210ENST00000640652 Q6ZT83 130 aa4.72□□□□□ -1.65
SCN3A-210ENST00000640652 NPY1RP25929 384 aa4.72□□□□□ -1.65
SCN3A-210ENST00000640652 OPRK1P41145 380 aa4.72□□□□□ -1.65
SCN3A-210ENST00000640652 MYPOPQ86VE0 399 aaPredicted RBP4.72□□□□□ -1.65
SCN3A-210ENST00000640652 FSCN3Q9NQT6 498 aa4.72□□□□□ -1.65
SCN3A-210ENST00000640652 SLC35D1Q9NTN3 355 aa4.72□□□□□ -1.65
SCN3A-210ENST00000640652 RNF115Q9Y4L5 304 aa4.72□□□□□ -1.65
SCN3A-210ENST00000640652 CFAP54Q96N23 3096 aa4.72□□□□□ -1.65
SCN3A-210ENST00000640652 IGKV1D-13A0A0B4J2D9 117 aa4.72□□□□□ -1.65
SCN3A-210ENST00000640652 IGKV1-12A0A0C4DH73 117 aa4.72□□□□□ -1.65
SCN3A-210ENST00000640652 IGKV1D-12P01611 117 aa4.72□□□□□ -1.65
SCN3A-210ENST00000640652 IGKV1-13P0DP09 117 aa4.72□□□□□ -1.65
SCN3A-210ENST00000640652 HNF1AP20823 631 aa4.72□□□□□ -1.65
SCN3A-210ENST00000640652 OR10J1P30954 320 aa4.72□□□□□ -1.65
SCN3A-210ENST00000640652 BRS3P32247 399 aa4.72□□□□□ -1.65
SCN3A-210ENST00000640652 C1orf162Q8NEQ5 155 aaPredicted RBP4.72□□□□□ -1.65
SCN3A-210ENST00000640652 SLC24A4Q8NFF2 622 aa4.72□□□□□ -1.65
SCN3A-210ENST00000640652 LRRC29Q8WV35 223 aa4.72□□□□□ -1.65
SCN3A-210ENST00000640652 HELTA6NFD8 242 aa4.72□□□□□ -1.65
SCN3A-210ENST00000640652 DEFB108AA8MXU0 73 aa4.72□□□□□ -1.65
SCN3A-210ENST00000640652 LINC00587B1AMM8 73 aa4.72□□□□□ -1.65
SCN3A-210ENST00000640652 RAMP3O60896 148 aa4.72□□□□□ -1.65
SCN3A-210ENST00000640652 ZNF880Q6PDB4 577 aa4.72□□□□□ -1.65
SCN3A-210ENST00000640652 REC114Q7Z4M0 266 aa4.72□□□□□ -1.65
SCN3A-210ENST00000640652 DRAM1Q8N682 238 aa4.72□□□□□ -1.65
SCN3A-210ENST00000640652 SLC25A40Q8TBP6 338 aa4.72□□□□□ -1.65
SCN3A-210ENST00000640652 MBD3L1Q8WWY6 194 aa4.72□□□□□ -1.65
SCN3A-210ENST00000640652 K7ESF4 209 aa4.71□□□□□ -1.65
SCN3A-210ENST00000640652 MT-CO3P00414 261 aa4.71□□□□□ -1.65
SCN3A-210ENST00000640652 TRGC1P0CF51 173 aa4.71□□□□□ -1.65
SCN3A-210ENST00000640652 ZNF525Q8N782 197 aa4.71□□□□□ -1.65
SCN3A-210ENST00000640652 GPR146Q96CH1 333 aa4.71□□□□□ -1.65
SCN3A-210ENST00000640652 QTRT1Q9BXR0 403 aaKnown RBP4.71□□□□□ -1.65
SCN3A-210ENST00000640652 SRD5A3Q9H8P0 318 aa4.71□□□□□ -1.65
SCN3A-210ENST00000640652 NAT8BQ9UHF3 227 aa4.71□□□□□ -1.65
SCN3A-210ENST00000640652 E9PLN8 166 aa4.71□□□□□ -1.65
SCN3A-210ENST00000640652 PAGE4O60829 102 aa4.71□□□□□ -1.65
SCN3A-210ENST00000640652 NDUFB7P17568 137 aa4.71□□□□□ -1.65
SCN3A-210ENST00000640652 FABP6P51161 128 aa4.71□□□□□ -1.65
SCN3A-210ENST00000640652 PAFAH1B2P68402 229 aa4.71□□□□□ -1.65
SCN3A-210ENST00000640652 PAX5Q02548 391 aa4.71□□□□□ -1.65
SCN3A-210ENST00000640652 ZFP36L1Q07352 338 aaKnown RBP4.71□□□□□ -1.65
SCN3A-210ENST00000640652 BATFQ16520 125 aa4.71□□□□□ -1.65
SCN3A-210ENST00000640652 RTN4RL2Q86UN3 420 aa4.71□□□□□ -1.65
SCN3A-210ENST00000640652 TMEM251Q8N6I4 163 aa4.71□□□□□ -1.65
SCN3A-210ENST00000640652 RAB24Q969Q5 203 aa4.71□□□□□ -1.65
SCN3A-210ENST00000640652 GPHA2Q96T91 129 aa4.71□□□□□ -1.65
SCN3A-210ENST00000640652 TXN2Q99757 166 aa4.71□□□□□ -1.65
SCN3A-210ENST00000640652 SEBOXQ9HB31 216 aaPredicted RBP4.71□□□□□ -1.65
SCN3A-210ENST00000640652 SSUH2Q9Y2M2 353 aa4.71□□□□□ -1.65
SCN3A-210ENST00000640652 IGHV3-64DA0A0J9YX35 117 aa4.71□□□□□ -1.66
SCN3A-210ENST00000640652 NTN3O00634 580 aaPredicted RBP4.71□□□□□ -1.66
SCN3A-210ENST00000640652 IGHV2-5P01817 119 aa4.71□□□□□ -1.66
SCN3A-210ENST00000640652 HLA-DQA1P01909 254 aa4.71□□□□□ -1.66
SCN3A-210ENST00000640652 Q6ZSR3 168 aa4.71□□□□□ -1.66
SCN3A-210ENST00000640652 VSTM2AQ8TAG5 236 aa4.71□□□□□ -1.66
SCN3A-210ENST00000640652 RNASEH2CQ8TDP1 164 aaKnown RBP4.71□□□□□ -1.66
SCN3A-210ENST00000640652 CT45A6P0DMU7 189 aa4.71□□□□□ -1.66
SCN3A-210ENST00000640652 CT45A5P0DMU8 189 aa4.71□□□□□ -1.66
SCN3A-210ENST00000640652 CT45A7P0DMV0 189 aa4.71□□□□□ -1.66
SCN3A-210ENST00000640652 ZNF146Q15072 292 aa4.71□□□□□ -1.66
SCN3A-210ENST00000640652 CT45A1Q5HYN5 189 aa4.71□□□□□ -1.66
SCN3A-210ENST00000640652 ZNF343Q6P1L6 599 aa4.71□□□□□ -1.66
SCN3A-210ENST00000640652 PCSK4Q6UW60 755 aa4.71□□□□□ -1.66
SCN3A-210ENST00000640652 STXBP6Q8NFX7 210 aa4.71□□□□□ -1.66
SCN3A-210ENST00000640652 CT45A3Q8NHU0 189 aa4.71□□□□□ -1.66
SCN3A-210ENST00000640652 MESP1Q9BRJ9 268 aa4.71□□□□□ -1.66
SCN3A-210ENST00000640652 PCGF1Q9BSM1 259 aa4.71□□□□□ -1.66
SCN3A-210ENST00000640652 SDF2L1Q9HCN8 221 aa4.71□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms