RNA–Protein interactions for RNA: ENST00000639841.1

NECAP1-220, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 1,982 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-220ENST00000639841 MYRFQ9Y2G1 1151 aa5.58□□□□□ -1.52
NECAP1-220ENST00000639841 LSM5Q9Y4Y9 91 aaKnown RBP5.58□□□□□ -1.52
NECAP1-220ENST00000639841 ZFHX3Q15911 3703 aa5.58□□□□□ -1.52
NECAP1-220ENST00000639841 IGHV4-30-2A0A087WSY4 118 aa5.58□□□□□ -1.52
NECAP1-220ENST00000639841 PPBPP02775 128 aa5.58□□□□□ -1.52
NECAP1-220ENST00000639841 MMP7P09237 267 aaPredicted RBP5.58□□□□□ -1.52
NECAP1-220ENST00000639841 GKN3PP0CG01 181 aa5.58□□□□□ -1.52
NECAP1-220ENST00000639841 HIST1H1TP22492 207 aaPredicted RBP5.58□□□□□ -1.52
NECAP1-220ENST00000639841 MYL9P24844 172 aa5.58□□□□□ -1.52
NECAP1-220ENST00000639841 LGALS7P47929 136 aa5.58□□□□□ -1.52
NECAP1-220ENST00000639841 DSCR9P59020 149 aa5.58□□□□□ -1.52
NECAP1-220ENST00000639841 RSU1Q15404 277 aa5.58□□□□□ -1.52
NECAP1-220ENST00000639841 CCDC58Q4VC31 144 aa5.58□□□□□ -1.52
NECAP1-220ENST00000639841 MORN5Q5VZ52 161 aa5.58□□□□□ -1.52
NECAP1-220ENST00000639841 SBSNQ6UWP8 590 aa5.58□□□□□ -1.52
NECAP1-220ENST00000639841 LINC00173Q6ZV60 143 aa5.58□□□□□ -1.52
NECAP1-220ENST00000639841 DHFR2Q86XF0 187 aa5.58□□□□□ -1.52
NECAP1-220ENST00000639841 OR51S1Q8NGJ8 323 aa5.58□□□□□ -1.52
NECAP1-220ENST00000639841 OR10G9Q8NGN4 311 aa5.58□□□□□ -1.52
NECAP1-220ENST00000639841 OR1J4Q8NGS1 313 aa5.58□□□□□ -1.52
NECAP1-220ENST00000639841 OR4X1Q8NH49 305 aa5.58□□□□□ -1.52
NECAP1-220ENST00000639841 LINC01560Q8TB33 94 aa5.58□□□□□ -1.52
NECAP1-220ENST00000639841 ZNF524Q96C55 264 aa5.58□□□□□ -1.52
NECAP1-220ENST00000639841 LRRC58Q96CX6 371 aa5.58□□□□□ -1.52
NECAP1-220ENST00000639841 SUCNR1Q9BXA5 334 aa5.58□□□□□ -1.52
NECAP1-220ENST00000639841 DCSTAMPQ9H295 470 aa5.58□□□□□ -1.52
NECAP1-220ENST00000639841 MIXL1Q9H2W2 232 aa5.58□□□□□ -1.52
NECAP1-220ENST00000639841 CSPG4Q6UVK1 2322 aa5.58□□□□□ -1.52
NECAP1-220ENST00000639841 EFCAB10A6NFE3 127 aa5.57□□□□□ -1.52
NECAP1-220ENST00000639841 FAM159BA6NKW6 160 aa5.57□□□□□ -1.52
NECAP1-220ENST00000639841 MPTX1A8MV57 137 aa5.57□□□□□ -1.52
NECAP1-220ENST00000639841 CD5LO43866 347 aa5.57□□□□□ -1.52
NECAP1-220ENST00000639841 NOS1APO75052 506 aaPredicted RBP5.57□□□□□ -1.52
NECAP1-220ENST00000639841 REM1O75628 298 aa5.57□□□□□ -1.52
NECAP1-220ENST00000639841 GPR75O95800 540 aa5.57□□□□□ -1.52
NECAP1-220ENST00000639841 MRPL3P09001 348 aaKnown RBP5.57□□□□□ -1.52
NECAP1-220ENST00000639841 MYL12AP19105 171 aa5.57□□□□□ -1.52
NECAP1-220ENST00000639841 CXCL3P19876 107 aa5.57□□□□□ -1.52
NECAP1-220ENST00000639841 SSR2P43308 183 aa5.57□□□□□ -1.52
NECAP1-220ENST00000639841 GNG3P63215 75 aa5.57□□□□□ -1.52
NECAP1-220ENST00000639841 REG3AQ06141 175 aa5.57□□□□□ -1.52
NECAP1-220ENST00000639841 EBPQ15125 230 aaKnown RBP5.57□□□□□ -1.52
NECAP1-220ENST00000639841 ARHGAP11BQ3KRB8 267 aa5.57□□□□□ -1.52
NECAP1-220ENST00000639841 TMEM255AQ5JRV8 349 aa5.57□□□□□ -1.52
NECAP1-220ENST00000639841 CLVS1Q8IUQ0 354 aaPredicted RBP5.57□□□□□ -1.52
NECAP1-220ENST00000639841 ZCCHC24Q8N2G6 241 aaKnown RBP5.57□□□□□ -1.52
NECAP1-220ENST00000639841 OR13D1Q8NGV5 346 aa5.57□□□□□ -1.52
NECAP1-220ENST00000639841 TM4SF18Q96CE8 201 aa5.57□□□□□ -1.52
NECAP1-220ENST00000639841 CAPZA3Q96KX2 299 aa5.57□□□□□ -1.52
NECAP1-220ENST00000639841 MS4A8Q9BY19 250 aa5.57□□□□□ -1.52
NECAP1-220ENST00000639841 GNB4Q9HAV0 340 aa5.57□□□□□ -1.52
NECAP1-220ENST00000639841 RBFOX1Q9NWB1 397 aaKnown RBP5.57□□□□□ -1.52
NECAP1-220ENST00000639841 DKKL1Q9UK85 242 aa5.57□□□□□ -1.52
NECAP1-220ENST00000639841 PAIP2BQ9ULR5 123 aaKnown RBP5.57□□□□□ -1.52
NECAP1-220ENST00000639841 PYGO1Q9Y3Y4 419 aa5.57□□□□□ -1.52
NECAP1-220ENST00000639841 IGHV3-16A0A0C4DH30 117 aa5.56□□□□□ -1.52
NECAP1-220ENST00000639841 C8orf87E5RJ46 101 aa5.56□□□□□ -1.52
NECAP1-220ENST00000639841 ZSCAN5DPP0CG00 497 aa5.56□□□□□ -1.52
NECAP1-220ENST00000639841 PRSS3P35030 304 aa5.56□□□□□ -1.52
NECAP1-220ENST00000639841 HBG1P69891 147 aa5.56□□□□□ -1.52
NECAP1-220ENST00000639841 HBG2P69892 147 aa5.56□□□□□ -1.52
NECAP1-220ENST00000639841 DNM1P46Q6ZS02 220 aa5.56□□□□□ -1.52
NECAP1-220ENST00000639841 ZNF485Q8NCK3 441 aa5.56□□□□□ -1.52
NECAP1-220ENST00000639841 METTL26Q96S19 204 aa5.56□□□□□ -1.52
NECAP1-220ENST00000639841 SMR3AQ99954 134 aa5.56□□□□□ -1.52
NECAP1-220ENST00000639841 DDX31Q9H8H2 851 aaKnown RBP5.56□□□□□ -1.52
NECAP1-220ENST00000639841 DOCK7Q96N67 2140 aa5.56□□□□□ -1.52
NECAP1-220ENST00000639841 FN1P02751 2386 aaKnown RBP5.56□□□□□ -1.52
NECAP1-220ENST00000639841 RAI1Q7Z5J4 1906 aaPredicted RBP5.56□□□□□ -1.52
NECAP1-220ENST00000639841 UQCRHLA0A096LP55 91 aa5.56□□□□□ -1.52
NECAP1-220ENST00000639841 DEFB108AA8MXU0 73 aa5.56□□□□□ -1.52
NECAP1-220ENST00000639841 STK16O75716 305 aa5.56□□□□□ -1.52
NECAP1-220ENST00000639841 S1PR2O95136 353 aa5.56□□□□□ -1.52
NECAP1-220ENST00000639841 CXCL2P19875 107 aa5.56□□□□□ -1.52
NECAP1-220ENST00000639841 CXCR1P25024 350 aa5.56□□□□□ -1.52
NECAP1-220ENST00000639841 FMO3P31513 532 aa5.56□□□□□ -1.52
NECAP1-220ENST00000639841 GZMMP51124 257 aa5.56□□□□□ -1.52
NECAP1-220ENST00000639841 MS4A2Q01362 244 aa5.56□□□□□ -1.52
NECAP1-220ENST00000639841 LRRC36Q1X8D7 754 aa5.56□□□□□ -1.52
NECAP1-220ENST00000639841 HIST2H3PS2Q5TEC6 136 aa5.56□□□□□ -1.52
NECAP1-220ENST00000639841 C1orf146Q5VVC0 180 aa5.56□□□□□ -1.52
NECAP1-220ENST00000639841 OAFQ86UD1 273 aa5.56□□□□□ -1.52
NECAP1-220ENST00000639841 COX18Q8N8Q8 333 aa5.56□□□□□ -1.52
NECAP1-220ENST00000639841 C9orf106Q8NAJ2 232 aa5.56□□□□□ -1.52
NECAP1-220ENST00000639841 OR4P4Q8NGL7 312 aa5.56□□□□□ -1.52
NECAP1-220ENST00000639841 SPNS1Q9H2V7 528 aa5.56□□□□□ -1.52
NECAP1-220ENST00000639841 PROK2Q9HC23 129 aa5.56□□□□□ -1.52
NECAP1-220ENST00000639841 FAIMQ9NVQ4 179 aa5.56□□□□□ -1.52
NECAP1-220ENST00000639841 POLR1DQ9Y2S0 133 aa5.56□□□□□ -1.52
NECAP1-220ENST00000639841 GCM2O75603 506 aaPredicted RBP5.55□□□□□ -1.52
NECAP1-220ENST00000639841 IFNA1P01562 189 aa5.55□□□□□ -1.52
NECAP1-220ENST00000639841 CSF3P09919 207 aa5.55□□□□□ -1.52
NECAP1-220ENST00000639841 PSMB1P20618 241 aaKnown RBP5.55□□□□□ -1.52
NECAP1-220ENST00000639841 S100A1P23297 94 aa5.55□□□□□ -1.52
NECAP1-220ENST00000639841 RAB5BP61020 215 aa5.55□□□□□ -1.52
NECAP1-220ENST00000639841 RUNX1Q01196 453 aa5.55□□□□□ -1.52
NECAP1-220ENST00000639841 ZNF45Q02386 682 aa5.55□□□□□ -1.52
NECAP1-220ENST00000639841 QPRTQ15274 297 aa5.55□□□□□ -1.52
NECAP1-220ENST00000639841 ZNF774Q6NX45 483 aa5.55□□□□□ -1.52
NECAP1-220ENST00000639841 NEGR1Q7Z3B1 354 aa5.55□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms