RNA–Protein interactions for RNA: ENST00000639715.1

SCARB2-218, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 4,355 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-218ENST00000639715 PAGE4O60829 102 aa4.87□□□□□ -1.63
SCARB2-218ENST00000639715 GNG3P63215 75 aa4.87□□□□□ -1.63
SCARB2-218ENST00000639715 DMRTC1Q5HYR2 192 aa4.87□□□□□ -1.63
SCARB2-218ENST00000639715 LCN12Q6JVE5 192 aa4.87□□□□□ -1.63
SCARB2-218ENST00000639715 ZNF841Q6ZN19 808 aa4.87□□□□□ -1.63
SCARB2-218ENST00000639715 OR13G1Q8NGZ3 307 aa4.87□□□□□ -1.63
SCARB2-218ENST00000639715 OR10AG1Q8NH19 301 aa4.87□□□□□ -1.63
SCARB2-218ENST00000639715 DNASE2BQ8WZ79 361 aa4.87□□□□□ -1.63
SCARB2-218ENST00000639715 RDH5Q92781 318 aa4.87□□□□□ -1.63
SCARB2-218ENST00000639715 RSPO3Q9BXY4 272 aaPredicted RBP4.87□□□□□ -1.63
SCARB2-218ENST00000639715 GCM1Q9NP62 436 aa4.87□□□□□ -1.63
SCARB2-218ENST00000639715 FBLN5Q9UBX5 448 aa4.87□□□□□ -1.63
SCARB2-218ENST00000639715 C3orf85A0A1B0GTC6 90 aa4.86□□□□□ -1.63
SCARB2-218ENST00000639715 HS3ST1O14792 307 aa4.86□□□□□ -1.63
SCARB2-218ENST00000639715 PITX3O75364 302 aa4.86□□□□□ -1.63
SCARB2-218ENST00000639715 TUSC2O75896 110 aa4.86□□□□□ -1.63
SCARB2-218ENST00000639715 IGFBP3P17936 291 aaPredicted RBP4.86□□□□□ -1.63
SCARB2-218ENST00000639715 PTGER4P35408 488 aa4.86□□□□□ -1.63
SCARB2-218ENST00000639715 MDH2P40926 338 aaKnown RBP4.86□□□□□ -1.63
SCARB2-218ENST00000639715 PDLIM3Q53GG5 364 aaPredicted RBP4.86□□□□□ -1.63
SCARB2-218ENST00000639715 WIPI1Q5MNZ9 446 aaPredicted RBP4.86□□□□□ -1.63
SCARB2-218ENST00000639715 OR10D3Q8NH80 312 aa4.86□□□□□ -1.63
SCARB2-218ENST00000639715 FAM222BQ8WU58 562 aa4.86□□□□□ -1.63
SCARB2-218ENST00000639715 PERPQ96FX8 193 aa4.86□□□□□ -1.63
SCARB2-218ENST00000639715 YPEL4Q96NS1 127 aa4.86□□□□□ -1.63
SCARB2-218ENST00000639715 RAB40CQ96S21 281 aa4.86□□□□□ -1.63
SCARB2-218ENST00000639715 UBTD1Q9HAC8 227 aa4.86□□□□□ -1.63
SCARB2-218ENST00000639715 TUBD1Q9UJT1 453 aa4.86□□□□□ -1.63
SCARB2-218ENST00000639715 LHFPL6Q9Y693 200 aa4.86□□□□□ -1.63
SCARB2-218ENST00000639715 SPINT2O43291 252 aa4.86□□□□□ -1.63
SCARB2-218ENST00000639715 SNAI2O43623 268 aa4.86□□□□□ -1.63
SCARB2-218ENST00000639715 IL11P20809 199 aa4.86□□□□□ -1.63
SCARB2-218ENST00000639715 RNPS1Q15287 305 aaKnown RBP4.86□□□□□ -1.63
SCARB2-218ENST00000639715 FAM90A2PQ658T7 463 aa4.86□□□□□ -1.63
SCARB2-218ENST00000639715 SPSB3Q6PJ21 355 aa4.86□□□□□ -1.63
SCARB2-218ENST00000639715 MUC15Q8N387 334 aa4.86□□□□□ -1.63
SCARB2-218ENST00000639715 ZNF611Q8N823 705 aa4.86□□□□□ -1.63
SCARB2-218ENST00000639715 CNEP1R1Q8N9A8 125 aa4.86□□□□□ -1.63
SCARB2-218ENST00000639715 OR2M7Q8NG81 312 aa4.86□□□□□ -1.63
SCARB2-218ENST00000639715 OR2I1PQ8NGU4 316 aa4.86□□□□□ -1.63
SCARB2-218ENST00000639715 GPR146Q96CH1 333 aa4.86□□□□□ -1.63
SCARB2-218ENST00000639715 HIF1ANQ9NWT6 349 aa4.86□□□□□ -1.63
SCARB2-218ENST00000639715 FBXL7Q9UJT9 491 aa4.86□□□□□ -1.63
SCARB2-218ENST00000639715 FAM186AA6NE01 2351 aa4.86□□□□□ -1.63
SCARB2-218ENST00000639715 GAGE12HA6NDE8 117 aa4.86□□□□□ -1.63
SCARB2-218ENST00000639715 C11orf94C9JXX5 98 aa4.86□□□□□ -1.63
SCARB2-218ENST00000639715 NUPR1O60356 82 aa4.86□□□□□ -1.63
SCARB2-218ENST00000639715 LYL1P12980 280 aa4.86□□□□□ -1.63
SCARB2-218ENST00000639715 SPANXN5Q5MJ07 72 aa4.86□□□□□ -1.63
SCARB2-218ENST00000639715 WDR82Q6UXN9 313 aa4.86□□□□□ -1.63
SCARB2-218ENST00000639715 SLC25A45Q8N413 288 aa4.86□□□□□ -1.63
SCARB2-218ENST00000639715 OR2T6Q8NHC8 308 aa4.86□□□□□ -1.63
SCARB2-218ENST00000639715 TMEM230Q96A57 120 aa4.86□□□□□ -1.63
SCARB2-218ENST00000639715 PKIBQ9C010 78 aa4.86□□□□□ -1.63
SCARB2-218ENST00000639715 KIF26BQ2KJY2 2108 aa4.86□□□□□ -1.63
SCARB2-218ENST00000639715 A0A096LPE4 126 aa4.86□□□□□ -1.63
SCARB2-218ENST00000639715 A0A1W2PPZ6 126 aa4.86□□□□□ -1.63
SCARB2-218ENST00000639715 G3V4G9 280 aa4.86□□□□□ -1.63
SCARB2-218ENST00000639715 CD5LO43866 347 aa4.86□□□□□ -1.63
SCARB2-218ENST00000639715 CHST1O43916 411 aa4.86□□□□□ -1.63
SCARB2-218ENST00000639715 TIMM8AO60220 97 aaPredicted RBP4.86□□□□□ -1.63
SCARB2-218ENST00000639715 CA2P00918 260 aa4.86□□□□□ -1.63
SCARB2-218ENST00000639715 CRYAAP02489 173 aa4.86□□□□□ -1.63
SCARB2-218ENST00000639715 FTH1P19P0C7X4 201 aa4.86□□□□□ -1.63
SCARB2-218ENST00000639715 C3orf79P0CE67 100 aa4.86□□□□□ -1.63
SCARB2-218ENST00000639715 IAPPP10997 89 aa4.86□□□□□ -1.63
SCARB2-218ENST00000639715 VDAC1P21796 283 aa4.86□□□□□ -1.63
SCARB2-218ENST00000639715 TCL1AP56279 114 aa4.86□□□□□ -1.63
SCARB2-218ENST00000639715 SLC35B1P78383 322 aa4.86□□□□□ -1.63
SCARB2-218ENST00000639715 PRSS8Q16651 343 aa4.86□□□□□ -1.63
SCARB2-218ENST00000639715 OR2Z1Q8NG97 314 aa4.86□□□□□ -1.63
SCARB2-218ENST00000639715 OR52M1Q8NGK5 317 aa4.86□□□□□ -1.63
SCARB2-218ENST00000639715 OR1K1Q8NGR3 316 aa4.86□□□□□ -1.63
SCARB2-218ENST00000639715 SARAFQ96BY9 339 aa4.86□□□□□ -1.63
SCARB2-218ENST00000639715 QTRT1Q9BXR0 403 aaKnown RBP4.86□□□□□ -1.63
SCARB2-218ENST00000639715 GP6Q9HCN6 339 aa4.86□□□□□ -1.63
SCARB2-218ENST00000639715 HSPB8Q9UJY1 196 aa4.86□□□□□ -1.63
SCARB2-218ENST00000639715 MPC1Q9Y5U8 109 aa4.86□□□□□ -1.63
SCARB2-218ENST00000639715 ASXL3Q9C0F0 2248 aa4.85□□□□□ -1.63
SCARB2-218ENST00000639715 NKX2-6A6NCS4 301 aa4.85□□□□□ -1.63
SCARB2-218ENST00000639715 PRR32B1ATL7 298 aa4.85□□□□□ -1.63
SCARB2-218ENST00000639715 MPPED1O15442 326 aa4.85□□□□□ -1.63
SCARB2-218ENST00000639715 PDLIM4P50479 330 aa4.85□□□□□ -1.63
SCARB2-218ENST00000639715 PRDX4Q13162 271 aa4.85□□□□□ -1.63
SCARB2-218ENST00000639715 SHISA2Q6UWI4 295 aa4.85□□□□□ -1.63
SCARB2-218ENST00000639715 OR8B3Q8NGG8 313 aa4.85□□□□□ -1.63
SCARB2-218ENST00000639715 SSBP4Q9BWG4 385 aaPredicted RBP4.85□□□□□ -1.63
SCARB2-218ENST00000639715 OCIAD1Q9NX40 245 aa4.85□□□□□ -1.63
SCARB2-218ENST00000639715 GNG12Q9UBI6 72 aa4.85□□□□□ -1.63
SCARB2-218ENST00000639715 DOCK11Q5JSL3 2073 aa4.85□□□□□ -1.63
SCARB2-218ENST00000639715 EP300Q09472 2414 aaPredicted RBP4.85□□□□□ -1.63
SCARB2-218ENST00000639715 IGLC7A0M8Q6 106 aa4.85□□□□□ -1.63
SCARB2-218ENST00000639715 FAM231BA6NCW3 169 aa4.85□□□□□ -1.63
SCARB2-218ENST00000639715 B5MCH6 92 aa4.85□□□□□ -1.63
SCARB2-218ENST00000639715 ADAM20O43506 726 aa4.85□□□□□ -1.63
SCARB2-218ENST00000639715 CCL3P10147 92 aa4.85□□□□□ -1.63
SCARB2-218ENST00000639715 EGR1P18146 543 aa4.85□□□□□ -1.63
SCARB2-218ENST00000639715 COX5AP20674 150 aa4.85□□□□□ -1.63
SCARB2-218ENST00000639715 LMO1P25800 156 aa4.85□□□□□ -1.63
SCARB2-218ENST00000639715 SRIP30626 198 aa4.85□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms