RNA–Protein interactions for RNA: ENST00000637083.1

CLN8-212, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLN8, Length 2,001 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-212ENST00000637083 SPCS3P61009 180 aa10.07□□□□□ -0.8
CLN8-212ENST00000637083 GTF3C1Q12789 2109 aa10.07□□□□□ -0.8
CLN8-212ENST00000637083 VWC2Q2TAL6 325 aa10.07□□□□□ -0.8
CLN8-212ENST00000637083 PRAMEF5Q5TYX0 476 aa10.07□□□□□ -0.8
CLN8-212ENST00000637083 NCR3LG1Q68D85 454 aa10.07□□□□□ -0.8
CLN8-212ENST00000637083 LCN15Q6UWW0 184 aa10.07□□□□□ -0.8
CLN8-212ENST00000637083 CYB561D1Q8N8Q1 229 aa10.07□□□□□ -0.8
CLN8-212ENST00000637083 ZNRF1Q8ND25 227 aa10.07□□□□□ -0.8
CLN8-212ENST00000637083 MALSU1Q96EH3 234 aa10.07□□□□□ -0.8
CLN8-212ENST00000637083 ADTRPQ96IZ2 230 aa10.07□□□□□ -0.8
CLN8-212ENST00000637083 MAP1LC3BQ9GZQ8 125 aa10.07□□□□□ -0.8
CLN8-212ENST00000637083 RP1L1Q8IWN7 2480 aaPredicted RBP10.06□□□□□ -0.8
CLN8-212ENST00000637083 PMS2P5A8MQ11 134 aa10.06□□□□□ -0.8
CLN8-212ENST00000637083 VSTM5A8MXK1 200 aa10.06□□□□□ -0.8
CLN8-212ENST00000637083 IFNA17P01571 189 aa10.06□□□□□ -0.8
CLN8-212ENST00000637083 S100A6P06703 90 aa10.06□□□□□ -0.8
CLN8-212ENST00000637083 TNFRSF1AP19438 455 aa10.06□□□□□ -0.8
CLN8-212ENST00000637083 RAB5AP20339 215 aa10.06□□□□□ -0.8
CLN8-212ENST00000637083 FGF7P21781 194 aa10.06□□□□□ -0.8
CLN8-212ENST00000637083 LOXL3P58215 753 aa10.06□□□□□ -0.8
CLN8-212ENST00000637083 FAM27E3Q08E93 113 aa10.06□□□□□ -0.8
CLN8-212ENST00000637083 FAM53AQ6NSI3 398 aaPredicted RBP10.06□□□□□ -0.8
CLN8-212ENST00000637083 LHX4Q969G2 390 aa10.06□□□□□ -0.8
CLN8-212ENST00000637083 RAB39BQ96DA2 213 aa10.06□□□□□ -0.8
CLN8-212ENST00000637083 ZNF251Q9BRH9 671 aa10.06□□□□□ -0.8
CLN8-212ENST00000637083 GCM1Q9NP62 436 aa10.06□□□□□ -0.8
CLN8-212ENST00000637083 GFOD1Q9NXC2 390 aa10.06□□□□□ -0.8
CLN8-212ENST00000637083 DMXL2Q8TDJ6 3036 aa10.06□□□□□ -0.8
CLN8-212ENST00000637083 KBTBD11-OT1A0A1B0GTJ5 212 aa10.06□□□□□ -0.8
CLN8-212ENST00000637083 CTXND1A0A1B0GTU2 59 aa10.06□□□□□ -0.8
CLN8-212ENST00000637083 ZFP92A6NM28 416 aa10.06□□□□□ -0.8
CLN8-212ENST00000637083 C16orf97H3BN30 126 aa10.06□□□□□ -0.8
CLN8-212ENST00000637083 CYB5BO43169 146 aa10.06□□□□□ -0.8
CLN8-212ENST00000637083 IGHV1-46P01743 117 aa10.06□□□□□ -0.8
CLN8-212ENST00000637083 ELLP55199 621 aaPredicted RBP10.06□□□□□ -0.8
CLN8-212ENST00000637083 OR4S2Q8NH73 311 aa10.06□□□□□ -0.8
CLN8-212ENST00000637083 GGACTQ9BVM4 153 aa10.06□□□□□ -0.8
CLN8-212ENST00000637083 ACTR3CQ9C0K3 210 aaPredicted RBP10.06□□□□□ -0.8
CLN8-212ENST00000637083 VSIRQ9H7M9 311 aa10.06□□□□□ -0.8
CLN8-212ENST00000637083 A0A1W2PPH5 198 aa10.05□□□□□ -0.8
CLN8-212ENST00000637083 ZNF729A6NN14 1252 aaPredicted RBP10.05□□□□□ -0.8
CLN8-212ENST00000637083 CGB3P0DN86 165 aa10.05□□□□□ -0.8
CLN8-212ENST00000637083 CGB7P0DN87 165 aa10.05□□□□□ -0.8
CLN8-212ENST00000637083 DAOP14920 347 aa10.05□□□□□ -0.8
CLN8-212ENST00000637083 AGAP20933 346 aa10.05□□□□□ -0.8
CLN8-212ENST00000637083 THBS3P49746 956 aa10.05□□□□□ -0.8
CLN8-212ENST00000637083 RAB11AP62491 216 aa10.05□□□□□ -0.8
CLN8-212ENST00000637083 DLK1P80370 383 aa10.05□□□□□ -0.8
CLN8-212ENST00000637083 ZNF726P1Q15940 193 aa10.05□□□□□ -0.8
CLN8-212ENST00000637083 PDLIM3Q53GG5 364 aaPredicted RBP10.05□□□□□ -0.8
CLN8-212ENST00000637083 STUMQ69YW2 141 aa10.05□□□□□ -0.8
CLN8-212ENST00000637083 LINC00518Q8N0U6 118 aa10.05□□□□□ -0.8
CLN8-212ENST00000637083 ISOC2Q96AB3 205 aa10.05□□□□□ -0.8
CLN8-212ENST00000637083 IFI27L2Q9H2X8 130 aa10.05□□□□□ -0.8
CLN8-212ENST00000637083 A0A1W2PPE2 198 aa10.04□□□□□ -0.8
CLN8-212ENST00000637083 MPDU1O75352 247 aa10.04□□□□□ -0.8
CLN8-212ENST00000637083 ARG1P05089 322 aa10.04□□□□□ -0.8
CLN8-212ENST00000637083 AKR1D1P51857 326 aa10.04□□□□□ -0.8
CLN8-212ENST00000637083 HABP2Q14520 560 aaPredicted RBP10.04□□□□□ -0.8
CLN8-212ENST00000637083 FAM24BQ8N5W8 94 aa10.04□□□□□ -0.8
CLN8-212ENST00000637083 OR10G9Q8NGN4 311 aa10.04□□□□□ -0.8
CLN8-212ENST00000637083 OR10G7Q8NGN6 311 aa10.04□□□□□ -0.8
CLN8-212ENST00000637083 ZDHHC16Q969W1 377 aa10.04□□□□□ -0.8
CLN8-212ENST00000637083 QTRT1Q9BXR0 403 aaKnown RBP10.04□□□□□ -0.8
CLN8-212ENST00000637083 MANBALQ9NQG1 85 aa10.04□□□□□ -0.8
CLN8-212ENST00000637083 KIAA2026Q5HYC2 2103 aa10.04□□□□□ -0.8
CLN8-212ENST00000637083 DCHS1Q96JQ0 3298 aa10.04□□□□□ -0.8
CLN8-212ENST00000637083 NKX6-3A6NJ46 265 aa10.04□□□□□ -0.8
CLN8-212ENST00000637083 PROP1O75360 226 aa10.04□□□□□ -0.8
CLN8-212ENST00000637083 OR9G9P0C7N8 305 aa10.04□□□□□ -0.8
CLN8-212ENST00000637083 PSMB3P49720 205 aa10.04□□□□□ -0.8
CLN8-212ENST00000637083 C17orf58Q2M2W7 97 aa10.04□□□□□ -0.8
CLN8-212ENST00000637083 ACOT6Q3I5F7 207 aaPredicted RBP10.04□□□□□ -0.8
CLN8-212ENST00000637083 ZNF788Q6ZQV5 615 aa10.04□□□□□ -0.8
CLN8-212ENST00000637083 ASCL5Q7RTU5 278 aa10.04□□□□□ -0.8
CLN8-212ENST00000637083 DOLPP1Q86YN1 238 aa10.04□□□□□ -0.8
CLN8-212ENST00000637083 C1QL4Q86Z23 238 aa10.04□□□□□ -0.8
CLN8-212ENST00000637083 C2CD4CQ8TF44 421 aa10.04□□□□□ -0.8
CLN8-212ENST00000637083 CORO2AQ92828 525 aa10.04□□□□□ -0.8
CLN8-212ENST00000637083 ABHD17AQ96GS6 310 aa10.04□□□□□ -0.8
CLN8-212ENST00000637083 IDI2-AS1Q9NZ38 188 aa10.04□□□□□ -0.8
CLN8-212ENST00000637083 ATMQ13315 3056 aa10.03□□□□□ -0.8
CLN8-212ENST00000637083 NBEAQ8NFP9 2946 aa10.03□□□□□ -0.8
CLN8-212ENST00000637083 hADV38S2A0JD32 116 aa10.03□□□□□ -0.8
CLN8-212ENST00000637083 IFNA10P01566 189 aa10.03□□□□□ -0.8
CLN8-212ENST00000637083 CD55P08174 381 aa10.03□□□□□ -0.8
CLN8-212ENST00000637083 TDGF1P3P51864 188 aa10.03□□□□□ -0.8
CLN8-212ENST00000637083 FGF8P55075 233 aaPredicted RBP10.03□□□□□ -0.8
CLN8-212ENST00000637083 OR2B8PP59922 312 aa10.03□□□□□ -0.8
CLN8-212ENST00000637083 NHLH1Q02575 133 aa10.03□□□□□ -0.8
CLN8-212ENST00000637083 SPRNQ5BIV9 151 aa10.03□□□□□ -0.8
CLN8-212ENST00000637083 FFAR4Q5NUL3 377 aa10.03□□□□□ -0.8
CLN8-212ENST00000637083 TEX36Q5VZQ5 186 aa10.03□□□□□ -0.8
CLN8-212ENST00000637083 ZFP82Q8N141 532 aa10.03□□□□□ -0.8
CLN8-212ENST00000637083 RPP25LQ8N5L8 163 aaKnown RBP10.03□□□□□ -0.8
CLN8-212ENST00000637083 OR10A7Q8NGE5 316 aa10.03□□□□□ -0.8
CLN8-212ENST00000637083 NPCDR1Q9BY65 106 aa10.03□□□□□ -0.8
CLN8-212ENST00000637083 NGBQ9NPG2 151 aa10.03□□□□□ -0.8
CLN8-212ENST00000637083 HEYLQ9NQ87 328 aaPredicted RBP10.03□□□□□ -0.8
CLN8-212ENST00000637083 TMEM242Q9NWH2 141 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 74.6 ms