RNA–Protein interactions for RNA: ENST00000637004.1

CACNA1A-235, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 2,829 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-235ENST00000637004 CXCL13O43927 109 aa13.1□□□□□ -0.31
CACNA1A-235ENST00000637004 ZNF90Q03938 601 aa13.1□□□□□ -0.31
CACNA1A-235ENST00000637004 APOBEC3DQ96AK3 386 aaPredicted RBP13.1□□□□□ -0.31
CACNA1A-235ENST00000637004 DERL1Q9BUN8 251 aa13.1□□□□□ -0.31
CACNA1A-235ENST00000637004 CELA2AP08217 269 aa13.1□□□□□ -0.31
CACNA1A-235ENST00000637004 CDKN1AP38936 164 aa13.1□□□□□ -0.31
CACNA1A-235ENST00000637004 ZNF114Q8NC26 417 aa13.1□□□□□ -0.31
CACNA1A-235ENST00000637004 FAM122AQ96E09 287 aa13.1□□□□□ -0.31
CACNA1A-235ENST00000637004 ZNF488Q96MN9 340 aa13.1□□□□□ -0.31
CACNA1A-235ENST00000637004 A0A1W2PPV4 95 aa13.09□□□□□ -0.31
CACNA1A-235ENST00000637004 CBLN1P23435 193 aa13.09□□□□□ -0.31
CACNA1A-235ENST00000637004 TIMP3P35625 211 aa13.09□□□□□ -0.31
CACNA1A-235ENST00000637004 LINC00310P59036 64 aa13.09□□□□□ -0.31
CACNA1A-235ENST00000637004 CCL7P80098 99 aa13.09□□□□□ -0.31
CACNA1A-235ENST00000637004 C11orf42Q8N5U0 333 aa13.09□□□□□ -0.31
CACNA1A-235ENST00000637004 SLC35E1Q96K37 410 aa13.09□□□□□ -0.31
CACNA1A-235ENST00000637004 MRPL18Q9H0U6 180 aaKnown RBP13.09□□□□□ -0.31
CACNA1A-235ENST00000637004 ZNF552Q9H707 407 aaPredicted RBP13.09□□□□□ -0.31
CACNA1A-235ENST00000637004 DNAJC4Q9NNZ3 241 aa13.09□□□□□ -0.31
CACNA1A-235ENST00000637004 SH2D2AQ9NP31 389 aa13.09□□□□□ -0.31
CACNA1A-235ENST00000637004 TRAPPC2LQ9UL33 140 aa13.09□□□□□ -0.31
CACNA1A-235ENST00000637004 TCF21O43680 179 aa13.09□□□□□ -0.31
CACNA1A-235ENST00000637004 CHRNB4P30926 498 aa13.09□□□□□ -0.31
CACNA1A-235ENST00000637004 SRD5A2P31213 254 aa13.09□□□□□ -0.31
CACNA1A-235ENST00000637004 B3GALT5-AS1P59052 145 aa13.09□□□□□ -0.31
CACNA1A-235ENST00000637004 Q0VG73 95 aa13.09□□□□□ -0.31
CACNA1A-235ENST00000637004 SIGLECL1Q8N7X8 197 aa13.09□□□□□ -0.31
CACNA1A-235ENST00000637004 RNF2Q99496 336 aa13.09□□□□□ -0.31
CACNA1A-235ENST00000637004 MSL2Q9HCI7 577 aa13.09□□□□□ -0.31
CACNA1A-235ENST00000637004 ZNF586Q9NXT0 402 aa13.09□□□□□ -0.31
CACNA1A-235ENST00000637004 ADAMTS20P59510 1910 aa13.08□□□□□ -0.31
CACNA1A-235ENST00000637004 LOC102723996A0A087X1L8 192 aa13.08□□□□□ -0.31
CACNA1A-235ENST00000637004 C5orf49A4QMS7 147 aa13.08□□□□□ -0.31
CACNA1A-235ENST00000637004 HOXC12P31275 282 aa13.08□□□□□ -0.31
CACNA1A-235ENST00000637004 FBXW9Q5XUX1 488 aa13.08□□□□□ -0.31
CACNA1A-235ENST00000637004 MRPL14Q6P1L8 145 aaKnown RBP13.08□□□□□ -0.31
CACNA1A-235ENST00000637004 YRDCQ86U90 279 aaKnown RBP13.08□□□□□ -0.31
CACNA1A-235ENST00000637004 GGNQ86UU5 652 aa13.08□□□□□ -0.31
CACNA1A-235ENST00000637004 ZBTB34Q8NCN2 500 aa13.08□□□□□ -0.31
CACNA1A-235ENST00000637004 CCDC74BQ96LY2 380 aa13.08□□□□□ -0.31
CACNA1A-235ENST00000637004 EML6Q6ZMW3 1958 aa13.08□□□□□ -0.32
CACNA1A-235ENST00000637004 PGPEP1LA6NFU8 196 aa13.08□□□□□ -0.32
CACNA1A-235ENST00000637004 OR5B21A6NL26 309 aa13.08□□□□□ -0.32
CACNA1A-235ENST00000637004 CFIP05156 583 aa13.08□□□□□ -0.32
CACNA1A-235ENST00000637004 DEFA4P12838 97 aa13.08□□□□□ -0.32
CACNA1A-235ENST00000637004 GNG3P63215 75 aa13.08□□□□□ -0.32
CACNA1A-235ENST00000637004 QTRT1Q9BXR0 403 aaKnown RBP13.08□□□□□ -0.32
CACNA1A-235ENST00000637004 ARRDC1-AS1Q9H2J1 176 aa13.08□□□□□ -0.32
CACNA1A-235ENST00000637004 IL36BQ9NZH7 164 aa13.08□□□□□ -0.32
CACNA1A-235ENST00000637004 TRAV39A0A0B4J263 110 aa13.08□□□□□ -0.32
CACNA1A-235ENST00000637004 ODAMA1E959 279 aa13.08□□□□□ -0.32
CACNA1A-235ENST00000637004 ANKRD30BLA7E2S9 258 aa13.08□□□□□ -0.32
CACNA1A-235ENST00000637004 ZG16O60844 167 aa13.08□□□□□ -0.32
CACNA1A-235ENST00000637004 P0C879 139 aa13.08□□□□□ -0.32
CACNA1A-235ENST00000637004 G6PCP35575 357 aa13.08□□□□□ -0.32
CACNA1A-235ENST00000637004 OR10D3Q8NH80 312 aa13.08□□□□□ -0.32
CACNA1A-235ENST00000637004 TFPI2P48307 235 aa13.07□□□□□ -0.32
CACNA1A-235ENST00000637004 PKIBQ9C010 78 aa13.07□□□□□ -0.32
CACNA1A-235ENST00000637004 SLC45A2Q9UMX9 530 aa13.07□□□□□ -0.32
CACNA1A-235ENST00000637004 TRBV20OR9-2A0A075B6H5 130 aa13.07□□□□□ -0.32
CACNA1A-235ENST00000637004 IGHV1-45A0A0A0MS14 117 aa13.07□□□□□ -0.32
CACNA1A-235ENST00000637004 FCN1O00602 326 aa13.07□□□□□ -0.32
CACNA1A-235ENST00000637004 ITGB1BP1O14713 200 aa13.07□□□□□ -0.32
CACNA1A-235ENST00000637004 COMPP49747 757 aaPredicted RBP13.07□□□□□ -0.32
CACNA1A-235ENST00000637004 ZNF497Q6ZNH5 498 aa13.07□□□□□ -0.32
CACNA1A-235ENST00000637004 C22orf15Q8WYQ4 148 aa13.07□□□□□ -0.32
CACNA1A-235ENST00000637004 WDR54Q9H977 334 aa13.07□□□□□ -0.32
CACNA1A-235ENST00000637004 MPC1Q9Y5U8 109 aa13.07□□□□□ -0.32
CACNA1A-235ENST00000637004 TRAV38-1A0A0B4J264 116 aa13.06□□□□□ -0.32
CACNA1A-235ENST00000637004 C20orf202A1L168 122 aa13.06□□□□□ -0.32
CACNA1A-235ENST00000637004 CIDEAO60543 219 aa13.06□□□□□ -0.32
CACNA1A-235ENST00000637004 MMP23AO75900 390 aa13.06□□□□□ -0.32
CACNA1A-235ENST00000637004 BMP5P22003 454 aa13.06□□□□□ -0.32
CACNA1A-235ENST00000637004 SUMO1P63165 101 aaKnown RBP13.06□□□□□ -0.32
CACNA1A-235ENST00000637004 CATR1Q13166 79 aa13.06□□□□□ -0.32
CACNA1A-235ENST00000637004 IMMP1LQ96LU5 166 aa13.06□□□□□ -0.32
CACNA1A-235ENST00000637004 UQCR10Q9UDW1 63 aa13.06□□□□□ -0.32
CACNA1A-235ENST00000637004 WDR83OSQ9Y284 106 aa13.06□□□□□ -0.32
CACNA1A-235ENST00000637004 ASCC3Q8N3C0 2202 aaKnown RBP13.06□□□□□ -0.32
CACNA1A-235ENST00000637004 TRBV9A0A0B4J1U6 114 aa13.06□□□□□ -0.32
CACNA1A-235ENST00000637004 RAMP3O60896 148 aa13.06□□□□□ -0.32
CACNA1A-235ENST00000637004 CCL2P13500 99 aa13.06□□□□□ -0.32
CACNA1A-235ENST00000637004 MLF1P58340 268 aa13.06□□□□□ -0.32
CACNA1A-235ENST00000637004 RPL19P84098 196 aaKnown RBP13.06□□□□□ -0.32
CACNA1A-235ENST00000637004 HLA-BQ31612 363 aa13.06□□□□□ -0.32
CACNA1A-235ENST00000637004 LYSMD4Q5XG99 296 aa13.06□□□□□ -0.32
CACNA1A-235ENST00000637004 PMS2CLQ68D20 193 aa13.06□□□□□ -0.32
CACNA1A-235ENST00000637004 Q6P435 159 aa13.06□□□□□ -0.32
CACNA1A-235ENST00000637004 RPS19BP1Q86WX3 136 aaKnown RBP13.06□□□□□ -0.32
CACNA1A-235ENST00000637004 ZNF645Q8N7E2 425 aa13.06□□□□□ -0.32
CACNA1A-235ENST00000637004 OR1L6Q8NGR2 347 aa13.06□□□□□ -0.32
CACNA1A-235ENST00000637004 OCC1Q8TAD7 63 aa13.06□□□□□ -0.32
CACNA1A-235ENST00000637004 AKIRIN1Q9H9L7 192 aaPredicted RBP13.06□□□□□ -0.32
CACNA1A-235ENST00000637004 DIRC3C9JPN6 131 aa13.05□□□□□ -0.32
CACNA1A-235ENST00000637004 RBMXL2O75526 392 aaKnown RBP13.05□□□□□ -0.32
CACNA1A-235ENST00000637004 IGHV3-9P01782 118 aa13.05□□□□□ -0.32
CACNA1A-235ENST00000637004 KRTDAPP60985 99 aa13.05□□□□□ -0.32
CACNA1A-235ENST00000637004 ARF1P84077 181 aaKnown RBP13.05□□□□□ -0.32
CACNA1A-235ENST00000637004 C1orf174Q8IYL3 243 aa13.05□□□□□ -0.32
CACNA1A-235ENST00000637004 FOXJ2Q9P0K8 574 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms