RNA–Protein interactions for RNA: ENST00000636549.1

CACNA1A-227, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 6,792 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-227ENST00000636549 MRPL30Q8TCC3 161 aaKnown RBP15.31■□□□□ 0.04
CACNA1A-227ENST00000636549 DNAJC13O75165 2243 aa15.31■□□□□ 0.04
CACNA1A-227ENST00000636549 BGLAPP02818 100 aa15.31■□□□□ 0.04
CACNA1A-227ENST00000636549 KLF14Q8TD94 323 aaPredicted RBP15.31■□□□□ 0.04
CACNA1A-227ENST00000636549 PARLQ9H300 379 aa15.31■□□□□ 0.04
CACNA1A-227ENST00000636549 DOCK5Q9H7D0 1870 aa15.31■□□□□ 0.04
CACNA1A-227ENST00000636549 LIPFP07098 398 aa15.31■□□□□ 0.04
CACNA1A-227ENST00000636549 QTRT1Q9BXR0 403 aaKnown RBP15.31■□□□□ 0.04
CACNA1A-227ENST00000636549 LAMB1P07942 1786 aa15.31■□□□□ 0.04
CACNA1A-227ENST00000636549 GRIFINA4D1Z8 144 aa15.31■□□□□ 0.04
CACNA1A-227ENST00000636549 NFAM1Q8NET5 270 aaPredicted RBP15.31■□□□□ 0.04
CACNA1A-227ENST00000636549 PRR31Q5SQ13 230 aa15.3■□□□□ 0.04
CACNA1A-227ENST00000636549 MAPK1IP1LQ8NDC0 245 aa15.3■□□□□ 0.04
CACNA1A-227ENST00000636549 HSPB9Q9BQS6 159 aa15.3■□□□□ 0.04
CACNA1A-227ENST00000636549 JKAMPQ9P055 326 aa15.3■□□□□ 0.04
CACNA1A-227ENST00000636549 SSBP1Q04837 148 aaKnown RBP15.3■□□□□ 0.04
CACNA1A-227ENST00000636549 DSPPQ9NZW4 1301 aa15.3■□□□□ 0.04
CACNA1A-227ENST00000636549 FGF5P12034 268 aa15.3■□□□□ 0.04
CACNA1A-227ENST00000636549 KLK2P20151 261 aa15.3■□□□□ 0.04
CACNA1A-227ENST00000636549 TSPOP30536 169 aa15.3■□□□□ 0.04
CACNA1A-227ENST00000636549 COX14Q96I36 57 aa15.3■□□□□ 0.04
CACNA1A-227ENST00000636549 UNC119Q13432 240 aa15.3■□□□□ 0.04
CACNA1A-227ENST00000636549 ABHD1Q96SE0 405 aa15.3■□□□□ 0.04
CACNA1A-227ENST00000636549 ZG16O60844 167 aa15.3■□□□□ 0.04
CACNA1A-227ENST00000636549 FOXH1O75593 365 aa15.3■□□□□ 0.04
CACNA1A-227ENST00000636549 TDGF1P3P51864 188 aa15.3■□□□□ 0.04
CACNA1A-227ENST00000636549 NEU3Q9UQ49 428 aa15.3■□□□□ 0.04
CACNA1A-227ENST00000636549 ANKRD20A5PA0PJZ0 165 aa15.29■□□□□ 0.04
CACNA1A-227ENST00000636549 C1QCP02747 245 aa15.29■□□□□ 0.04
CACNA1A-227ENST00000636549 PSG9Q00887 426 aa15.29■□□□□ 0.04
CACNA1A-227ENST00000636549 GALNT14Q96FL9 552 aa15.29■□□□□ 0.04
CACNA1A-227ENST00000636549 AHRRA9YTQ3 701 aa15.29■□□□□ 0.04
CACNA1A-227ENST00000636549 SLC25A45Q8N413 288 aa15.29■□□□□ 0.04
CACNA1A-227ENST00000636549 ALKBH7Q9BT30 221 aaPredicted RBP15.29■□□□□ 0.04
CACNA1A-227ENST00000636549 TRGV4A0A0C4DH28 118 aa15.29■□□□□ 0.04
CACNA1A-227ENST00000636549 LSM6P62312 80 aaKnown RBP15.29■□□□□ 0.04
CACNA1A-227ENST00000636549 NPIPB11E5RHQ5 1161 aa15.29■□□□□ 0.04
CACNA1A-227ENST00000636549 EGR1P18146 543 aa15.29■□□□□ 0.04
CACNA1A-227ENST00000636549 ZP3P21754 424 aa15.29■□□□□ 0.04
CACNA1A-227ENST00000636549 LINC00305Q7Z4B0 112 aa15.29■□□□□ 0.04
CACNA1A-227ENST00000636549 OR51G1Q8NGK1 321 aa15.29■□□□□ 0.04
CACNA1A-227ENST00000636549 METRNQ9UJH8 293 aa15.29■□□□□ 0.04
CACNA1A-227ENST00000636549 PIKFYVEQ9Y2I7 2098 aa15.29■□□□□ 0.04
CACNA1A-227ENST00000636549 CRYBB3P26998 211 aa15.29■□□□□ 0.04
CACNA1A-227ENST00000636549 CEACAM21Q3KPI0 293 aa15.29■□□□□ 0.04
CACNA1A-227ENST00000636549 TTC9CQ8N5M4 171 aa15.29■□□□□ 0.04
CACNA1A-227ENST00000636549 SIGLEC12Q96PQ1 595 aa15.29■□□□□ 0.04
CACNA1A-227ENST00000636549 TMEM70Q9BUB7 260 aa15.29■□□□□ 0.04
CACNA1A-227ENST00000636549 C10orf128Q5T292 105 aa15.28■□□□□ 0.04
CACNA1A-227ENST00000636549 TEX29Q8N6K0 151 aa15.28■□□□□ 0.04
CACNA1A-227ENST00000636549 NPVFQ9HCQ7 196 aa15.28■□□□□ 0.04
CACNA1A-227ENST00000636549 IL19Q9UHD0 177 aa15.28■□□□□ 0.04
CACNA1A-227ENST00000636549 DOCK1Q14185 1865 aa15.28■□□□□ 0.04
CACNA1A-227ENST00000636549 TSPAN7P41732 249 aa15.28■□□□□ 0.04
CACNA1A-227ENST00000636549 ICAM4Q14773 271 aa15.28■□□□□ 0.04
CACNA1A-227ENST00000636549 MRAPQ8TCY5 172 aa15.28■□□□□ 0.04
CACNA1A-227ENST00000636549 LRRC3BQ96PB8 259 aa15.28■□□□□ 0.04
CACNA1A-227ENST00000636549 WDR82Q6UXN9 313 aa15.28■□□□□ 0.04
CACNA1A-227ENST00000636549 ST6GALNAC6Q969X2 333 aa15.28■□□□□ 0.04
CACNA1A-227ENST00000636549 ST6GALNAC2Q9UJ37 374 aa15.28■□□□□ 0.04
CACNA1A-227ENST00000636549 FBXL7Q9UJT9 491 aa15.28■□□□□ 0.04
CACNA1A-227ENST00000636549 PILRBQ9UKJ0 227 aa15.28■□□□□ 0.04
CACNA1A-227ENST00000636549 SMCHD1A6NHR9 2005 aa15.28■□□□□ 0.04
CACNA1A-227ENST00000636549 ERVK11-1P61568 191 aa15.28■□□□□ 0.04
CACNA1A-227ENST00000636549 C2orf88Q9BSF0 95 aa15.28■□□□□ 0.04
CACNA1A-227ENST00000636549 TRAV24A0A0B4J272 114 aa15.28■□□□□ 0.04
CACNA1A-227ENST00000636549 TMEM42Q69YG0 159 aa15.28■□□□□ 0.04
CACNA1A-227ENST00000636549 NPBWR2P48146 333 aa15.27■□□□□ 0.04
CACNA1A-227ENST00000636549 KIR2DL4Q99706 377 aa15.27■□□□□ 0.04
CACNA1A-227ENST00000636549 ZNF107Q9UII5 783 aaPredicted RBP15.27■□□□□ 0.04
CACNA1A-227ENST00000636549 A0A1W2PQF6 199 aa15.27■□□□□ 0.04
CACNA1A-227ENST00000636549 PGA4P0DJD7 388 aa15.27■□□□□ 0.04
CACNA1A-227ENST00000636549 PGA5P0DJD9 388 aa15.27■□□□□ 0.04
CACNA1A-227ENST00000636549 ATP6V0CP27449 155 aa15.27■□□□□ 0.04
CACNA1A-227ENST00000636549 PLP1P60201 277 aa15.27■□□□□ 0.04
CACNA1A-227ENST00000636549 NPIPB3Q92617 1050 aa15.27■□□□□ 0.04
CACNA1A-227ENST00000636549 SNRNP200O75643 2136 aaKnown RBP15.27■□□□□ 0.04
CACNA1A-227ENST00000636549 LOC390937A0A1W2PQ73 354 aa15.27■□□□□ 0.03
CACNA1A-227ENST00000636549 C8orf46Q8TAG6 207 aa15.27■□□□□ 0.03
CACNA1A-227ENST00000636549 ZNF501Q96CX3 271 aaPredicted RBP15.27■□□□□ 0.03
CACNA1A-227ENST00000636549 ELF5Q9UKW6 265 aaPredicted RBP15.27■□□□□ 0.03
CACNA1A-227ENST00000636549 DICER1Q9UPY3 1922 aaKnown RBP15.27■□□□□ 0.03
CACNA1A-227ENST00000636549 SCN8AQ9UQD0 1980 aa15.27■□□□□ 0.03
CACNA1A-227ENST00000636549 GGCTO75223 188 aaKnown RBP15.27■□□□□ 0.03
CACNA1A-227ENST00000636549 RPL34P49207 117 aaKnown RBP15.27■□□□□ 0.03
CACNA1A-227ENST00000636549 SEMA5BQ9P283 1151 aa15.27■□□□□ 0.03
CACNA1A-227ENST00000636549 PEX11BO96011 259 aa15.26■□□□□ 0.03
CACNA1A-227ENST00000636549 ZNF506Q5JVG8 444 aa15.26■□□□□ 0.03
CACNA1A-227ENST00000636549 PPP1R27Q86WC6 154 aa15.26■□□□□ 0.03
CACNA1A-227ENST00000636549 RARRES2Q99969 163 aa15.26■□□□□ 0.03
CACNA1A-227ENST00000636549 ANGPTL4Q9BY76 406 aa15.26■□□□□ 0.03
CACNA1A-227ENST00000636549 LNP1A1A4G5 178 aa15.26■□□□□ 0.03
CACNA1A-227ENST00000636549 ZNF688P0C7X2 276 aa15.26■□□□□ 0.03
CACNA1A-227ENST00000636549 CGB3P0DN86 165 aa15.26■□□□□ 0.03
CACNA1A-227ENST00000636549 CXCL3P19876 107 aa15.26■□□□□ 0.03
CACNA1A-227ENST00000636549 PPIFP30405 207 aaKnown RBP15.26■□□□□ 0.03
CACNA1A-227ENST00000636549 TMEM219Q86XT9 240 aa15.26■□□□□ 0.03
CACNA1A-227ENST00000636549 OR51M1Q9H341 326 aa15.26■□□□□ 0.03
CACNA1A-227ENST00000636549 CD7P09564 240 aa15.26■□□□□ 0.03
CACNA1A-227ENST00000636549 VSIG8P0DPA2 414 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms