RNA–Protein interactions for RNA: ENST00000636020.1

CLN6-212, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 894 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-212ENST00000636020 RPL35AP18077 110 aaKnown RBP13.33□□□□□ -0.28
CLN6-212ENST00000636020 SLC38A6Q8IZM9 456 aa13.33□□□□□ -0.28
CLN6-212ENST00000636020 MUL1Q969V5 352 aa13.33□□□□□ -0.28
CLN6-212ENST00000636020 MYCBPQ99417 103 aaPredicted RBP13.33□□□□□ -0.28
CLN6-212ENST00000636020 RARRES2Q99969 163 aa13.33□□□□□ -0.28
CLN6-212ENST00000636020 GABARAPL3Q9BY60 117 aa13.33□□□□□ -0.28
CLN6-212ENST00000636020 ZNF320A2RRD8 509 aa13.32□□□□□ -0.28
CLN6-212ENST00000636020 GBX2P52951 348 aaPredicted RBP13.32□□□□□ -0.28
CLN6-212ENST00000636020 C15orf32Q32M92 178 aa13.32□□□□□ -0.28
CLN6-212ENST00000636020 ZIK1Q3SY52 487 aaPredicted RBP13.32□□□□□ -0.28
CLN6-212ENST00000636020 FAM106AQ4KMX7 169 aa13.32□□□□□ -0.28
CLN6-212ENST00000636020 TMEM177Q53S58 311 aa13.32□□□□□ -0.28
CLN6-212ENST00000636020 RBPMS2Q6ZRY4 209 aaKnown RBP13.32□□□□□ -0.28
CLN6-212ENST00000636020 MAPKAPK5-AS1Q8N8E1 139 aa13.32□□□□□ -0.28
CLN6-212ENST00000636020 TRUB1Q8WWH5 349 aaKnown RBP13.32□□□□□ -0.28
CLN6-212ENST00000636020 LGALS12Q96DT0 336 aa13.32□□□□□ -0.28
CLN6-212ENST00000636020 SLC35D1Q9NTN3 355 aa13.32□□□□□ -0.28
CLN6-212ENST00000636020 ORC6Q9Y5N6 252 aa13.32□□□□□ -0.28
CLN6-212ENST00000636020 OR2J3O76001 311 aa13.31□□□□□ -0.28
CLN6-212ENST00000636020 C8orf88P0DMB2 117 aa13.31□□□□□ -0.28
CLN6-212ENST00000636020 IGFBP3P17936 291 aaPredicted RBP13.31□□□□□ -0.28
CLN6-212ENST00000636020 GTF2A1P52655 376 aaPredicted RBP13.31□□□□□ -0.28
CLN6-212ENST00000636020 DHRSXQ8N5I4 330 aa13.31□□□□□ -0.28
CLN6-212ENST00000636020 ZNF645Q8N7E2 425 aa13.31□□□□□ -0.28
CLN6-212ENST00000636020 EDARADDQ8WWZ3 215 aa13.31□□□□□ -0.28
CLN6-212ENST00000636020 SRSF12Q8WXF0 261 aaKnown RBP13.31□□□□□ -0.28
CLN6-212ENST00000636020 GALNT14Q96FL9 552 aa13.31□□□□□ -0.28
CLN6-212ENST00000636020 HARBI1Q96MB7 349 aa13.31□□□□□ -0.28
CLN6-212ENST00000636020 SRRM4A7MD48 611 aaKnown RBP13.3□□□□□ -0.28
CLN6-212ENST00000636020 C11orf94C9JXX5 98 aa13.3□□□□□ -0.28
CLN6-212ENST00000636020 M0R2N4 97 aa13.3□□□□□ -0.28
CLN6-212ENST00000636020 MPPED1O15442 326 aa13.3□□□□□ -0.28
CLN6-212ENST00000636020 DENRO43583 198 aaKnown RBP13.3□□□□□ -0.28
CLN6-212ENST00000636020 S1PR2O95136 353 aa13.3□□□□□ -0.28
CLN6-212ENST00000636020 CEACAM6P40199 344 aa13.3□□□□□ -0.28
CLN6-212ENST00000636020 ODF3L2Q3SX64 289 aa13.3□□□□□ -0.28
CLN6-212ENST00000636020 OR4A47Q6IF82 309 aa13.3□□□□□ -0.28
CLN6-212ENST00000636020 ZNF880Q6PDB4 577 aa13.3□□□□□ -0.28
CLN6-212ENST00000636020 SVOPQ8N4V2 548 aa13.3□□□□□ -0.28
CLN6-212ENST00000636020 PTX4Q96A99 478 aa13.3□□□□□ -0.28
CLN6-212ENST00000636020 SPAG8Q99932 426 aaPredicted RBP13.3□□□□□ -0.28
CLN6-212ENST00000636020 OR1A1Q9P1Q5 309 aa13.3□□□□□ -0.28
CLN6-212ENST00000636020 CRTAPO75718 401 aaPredicted RBP13.29□□□□□ -0.28
CLN6-212ENST00000636020 CDK2AP2O75956 126 aa13.29□□□□□ -0.28
CLN6-212ENST00000636020 TNXAQ16473 311 aa13.29□□□□□ -0.28
CLN6-212ENST00000636020 PRSS8Q16651 343 aa13.29□□□□□ -0.28
CLN6-212ENST00000636020 TTC9CQ8N5M4 171 aa13.29□□□□□ -0.28
CLN6-212ENST00000636020 OR11H2Q8NH07 326 aa13.29□□□□□ -0.28
CLN6-212ENST00000636020 CYGBQ8WWM9 190 aa13.29□□□□□ -0.28
CLN6-212ENST00000636020 MARC2Q969Z3 335 aa13.29□□□□□ -0.28
CLN6-212ENST00000636020 ERVK13-1Q9NX77 482 aa13.29□□□□□ -0.28
CLN6-212ENST00000636020 ZNF221Q9UK13 617 aa13.29□□□□□ -0.28
CLN6-212ENST00000636020 DNAH5Q8TE73 4624 aa13.28□□□□□ -0.28
CLN6-212ENST00000636020 M0R1X1 148 aa13.28□□□□□ -0.28
CLN6-212ENST00000636020 DEFB4AO15263 64 aa13.28□□□□□ -0.28
CLN6-212ENST00000636020 ARL3P36405 182 aa13.28□□□□□ -0.28
CLN6-212ENST00000636020 MEDAGQ5VYS4 303 aa13.28□□□□□ -0.28
CLN6-212ENST00000636020 TTC23Q5W5X9 447 aa13.28□□□□□ -0.28
CLN6-212ENST00000636020 AWAT2Q6E213 333 aa13.28□□□□□ -0.28
CLN6-212ENST00000636020 JAGN1Q8N5M9 183 aa13.28□□□□□ -0.28
CLN6-212ENST00000636020 ZNF555Q8NEP9 628 aa13.28□□□□□ -0.28
CLN6-212ENST00000636020 CCDC140Q96MF4 163 aa13.28□□□□□ -0.28
CLN6-212ENST00000636020 FAAP24Q9BTP7 215 aa13.28□□□□□ -0.28
CLN6-212ENST00000636020 CSTL1Q9H114 145 aa13.28□□□□□ -0.28
CLN6-212ENST00000636020 Q9H521 79 aa13.28□□□□□ -0.28
CLN6-212ENST00000636020 IMPAD1Q9NX62 359 aa13.28□□□□□ -0.28
CLN6-212ENST00000636020 LOC100130705A0A1B0GUX0 176 aa13.27□□□□□ -0.29
CLN6-212ENST00000636020 NAPSAO96009 420 aa13.27□□□□□ -0.29
CLN6-212ENST00000636020 GNAO1P09471 354 aa13.27□□□□□ -0.29
CLN6-212ENST00000636020 SCTP09683 121 aa13.27□□□□□ -0.29
CLN6-212ENST00000636020 SNRPGP62308 76 aaKnown RBP13.27□□□□□ -0.29
CLN6-212ENST00000636020 MED22Q15528 200 aa13.27□□□□□ -0.29
CLN6-212ENST00000636020 ZNF585BQ52M93 769 aa13.27□□□□□ -0.29
CLN6-212ENST00000636020 GLT8D1Q68CQ7 371 aa13.27□□□□□ -0.29
CLN6-212ENST00000636020 XAF1Q6GPH4 301 aa13.27□□□□□ -0.29
CLN6-212ENST00000636020 CLEC19AQ6UXS0 136 aa13.27□□□□□ -0.29
CLN6-212ENST00000636020 POM121L12Q8N7R1 296 aa13.27□□□□□ -0.29
CLN6-212ENST00000636020 TEX45Q8NA69 505 aa13.27□□□□□ -0.29
CLN6-212ENST00000636020 C5orf66Q9H5L9 145 aa13.27□□□□□ -0.29
CLN6-212ENST00000636020 IGHV4-4A0A075B6R2 117 aa13.26□□□□□ -0.29
CLN6-212ENST00000636020 TRAV8-7A0A075B6U6 113 aa13.26□□□□□ -0.29
CLN6-212ENST00000636020 MPTX1A8MV57 137 aa13.26□□□□□ -0.29
CLN6-212ENST00000636020 TSPAN4O14817 238 aa13.26□□□□□ -0.29
CLN6-212ENST00000636020 SHOXO15266 292 aa13.26□□□□□ -0.29
CLN6-212ENST00000636020 IGHV3-23P01764 117 aa13.26□□□□□ -0.29
CLN6-212ENST00000636020 ZBTB25P24278 435 aa13.26□□□□□ -0.29
CLN6-212ENST00000636020 MED21Q13503 144 aa13.26□□□□□ -0.29
CLN6-212ENST00000636020 LGALS9BQ3B8N2 356 aa13.26□□□□□ -0.29
CLN6-212ENST00000636020 RPL22L1Q6P5R6 122 aaKnown RBP13.26□□□□□ -0.29
CLN6-212ENST00000636020 UNQ9165/PRO28630Q6UXU0 137 aa13.26□□□□□ -0.29
CLN6-212ENST00000636020 SPIN2AQ99865 258 aa13.26□□□□□ -0.29
CLN6-212ENST00000636020 SPIN2BQ9BPZ2 258 aa13.26□□□□□ -0.29
CLN6-212ENST00000636020 MRPL27Q9P0M9 148 aaKnown RBP13.26□□□□□ -0.29
CLN6-212ENST00000636020 UBE2KP61086 200 aa13.25□□□□□ -0.29
CLN6-212ENST00000636020 Q8N1X5 172 aa13.25□□□□□ -0.29
CLN6-212ENST00000636020 ZNF436-AS1Q8NC38 126 aaPredicted RBP13.25□□□□□ -0.29
CLN6-212ENST00000636020 OR13C5Q8NGS8 318 aa13.25□□□□□ -0.29
CLN6-212ENST00000636020 OR5B3Q8NH48 314 aa13.25□□□□□ -0.29
CLN6-212ENST00000636020 SETD6Q8TBK2 473 aa13.25□□□□□ -0.29
CLN6-212ENST00000636020 ACOT12Q8WYK0 555 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms