RNA–Protein interactions for RNA: ENST00000635997.1

NEDD4L-238, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 5 BASIC

Gene NEDD4L, Length 4,402 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-238ENST00000635997 C1orf174Q8IYL3 243 aa12.16□□□□□ -0.46
NEDD4L-238ENST00000635997 OR8I2Q8N0Y5 310 aa12.16□□□□□ -0.46
NEDD4L-238ENST00000635997 SCN8AQ9UQD0 1980 aa12.15□□□□□ -0.46
NEDD4L-238ENST00000635997 CXorf65A6NEN9 183 aa12.15□□□□□ -0.46
NEDD4L-238ENST00000635997 TGOLN2O43493 480 aa12.15□□□□□ -0.46
NEDD4L-238ENST00000635997 PAX6P26367 422 aa12.15□□□□□ -0.46
NEDD4L-238ENST00000635997 ZNF124Q15973 351 aa12.15□□□□□ -0.46
NEDD4L-238ENST00000635997 VAX1Q5SQQ9 334 aa12.15□□□□□ -0.46
NEDD4L-238ENST00000635997 ZIC4Q8N9L1 334 aa12.15□□□□□ -0.46
NEDD4L-238ENST00000635997 OR5P3Q8WZ94 311 aa12.15□□□□□ -0.46
NEDD4L-238ENST00000635997 PKIBQ9C010 78 aa12.15□□□□□ -0.46
NEDD4L-238ENST00000635997 C7orf69Q9H7B7 122 aa12.15□□□□□ -0.46
NEDD4L-238ENST00000635997 CDS2O95674 445 aa12.15□□□□□ -0.46
NEDD4L-238ENST00000635997 PLAUP00749 431 aa12.15□□□□□ -0.46
NEDD4L-238ENST00000635997 CNN1P51911 297 aaKnown RBP12.15□□□□□ -0.46
NEDD4L-238ENST00000635997 H2BFSP57053 126 aa12.15□□□□□ -0.46
NEDD4L-238ENST00000635997 H3F3AP84243 136 aa12.15□□□□□ -0.46
NEDD4L-238ENST00000635997 SSX7Q7RTT5 188 aa12.15□□□□□ -0.46
NEDD4L-238ENST00000635997 OR4P4Q8NGL7 312 aa12.15□□□□□ -0.46
NEDD4L-238ENST00000635997 OR1L8Q8NGR8 309 aa12.15□□□□□ -0.46
NEDD4L-238ENST00000635997 TMEM45BQ96B21 275 aa12.15□□□□□ -0.46
NEDD4L-238ENST00000635997 OR5AC2Q9NZP5 309 aa12.15□□□□□ -0.46
NEDD4L-238ENST00000635997 P2RY4P51582 365 aa12.15□□□□□ -0.46
NEDD4L-238ENST00000635997 UBE2L3P68036 154 aaKnown RBP12.15□□□□□ -0.46
NEDD4L-238ENST00000635997 IL24Q13007 206 aa12.15□□□□□ -0.46
NEDD4L-238ENST00000635997 CD200P41217 278 aa12.14□□□□□ -0.47
NEDD4L-238ENST00000635997 WFDC3Q8IUB2 231 aa12.14□□□□□ -0.47
NEDD4L-238ENST00000635997 FGFRL1Q8N441 504 aa12.14□□□□□ -0.47
NEDD4L-238ENST00000635997 AQP3Q92482 292 aa12.14□□□□□ -0.47
NEDD4L-238ENST00000635997 PHYHIPLQ96FC7 376 aa12.14□□□□□ -0.47
NEDD4L-238ENST00000635997 REPIN1Q9BWE0 567 aaKnown RBP12.14□□□□□ -0.47
NEDD4L-238ENST00000635997 AAMDCQ9H7C9 122 aa12.14□□□□□ -0.47
NEDD4L-238ENST00000635997 PARP11Q9NR21 331 aa12.14□□□□□ -0.47
NEDD4L-238ENST00000635997 A0A0G2JNJ9 132 aa12.14□□□□□ -0.47
NEDD4L-238ENST00000635997 DBX1A6NMT0 343 aa12.14□□□□□ -0.47
NEDD4L-238ENST00000635997 CHEK1O14757 476 aa12.14□□□□□ -0.47
NEDD4L-238ENST00000635997 IL18BPO95998 194 aa12.14□□□□□ -0.47
NEDD4L-238ENST00000635997 CTAG1AP78358 180 aa12.14□□□□□ -0.47
NEDD4L-238ENST00000635997 COTL1Q14019 142 aa12.14□□□□□ -0.47
NEDD4L-238ENST00000635997 ZNF596Q8TC21 504 aa12.14□□□□□ -0.47
NEDD4L-238ENST00000635997 TMEM204Q9BSN7 226 aa12.14□□□□□ -0.47
NEDD4L-238ENST00000635997 CRIM1Q9NZV1 1036 aa12.14□□□□□ -0.47
NEDD4L-238ENST00000635997 Q9UFV3 132 aa12.14□□□□□ -0.47
NEDD4L-238ENST00000635997 HSBP1L1C9JCN9 74 aa12.14□□□□□ -0.47
NEDD4L-238ENST00000635997 KIR2DS2P43631 304 aa12.14□□□□□ -0.47
NEDD4L-238ENST00000635997 IGF2-ASQ6U949 168 aa12.14□□□□□ -0.47
NEDD4L-238ENST00000635997 ZNF429Q86V71 674 aa12.14□□□□□ -0.47
NEDD4L-238ENST00000635997 OR4F17Q8NGA8 305 aa12.14□□□□□ -0.47
NEDD4L-238ENST00000635997 OR10S1Q8NGN2 331 aa12.14□□□□□ -0.47
NEDD4L-238ENST00000635997 ASB13Q8WXK3 278 aa12.14□□□□□ -0.47
NEDD4L-238ENST00000635997 RHOBP62745 196 aa12.14□□□□□ -0.47
NEDD4L-238ENST00000635997 DKK4Q9UBT3 224 aa12.14□□□□□ -0.47
NEDD4L-238ENST00000635997 ZNF737O75373 536 aa12.13□□□□□ -0.47
NEDD4L-238ENST00000635997 ERVFRD-1P60508 538 aa12.13□□□□□ -0.47
NEDD4L-238ENST00000635997 ANKRD55Q3KP44 614 aa12.13□□□□□ -0.47
NEDD4L-238ENST00000635997 ABHD12Q8N2K0 398 aa12.13□□□□□ -0.47
NEDD4L-238ENST00000635997 MDS2Q8NDY4 140 aa12.13□□□□□ -0.47
NEDD4L-238ENST00000635997 CBLN4Q9NTU7 201 aa12.13□□□□□ -0.47
NEDD4L-238ENST00000635997 NDUFA2O43678 99 aa12.13□□□□□ -0.47
NEDD4L-238ENST00000635997 PAX5Q02548 391 aa12.13□□□□□ -0.47
NEDD4L-238ENST00000635997 PSG5Q15238 335 aa12.13□□□□□ -0.47
NEDD4L-238ENST00000635997 PNKDQ8N490 385 aa12.13□□□□□ -0.47
NEDD4L-238ENST00000635997 OR10C1Q96KK4 312 aa12.13□□□□□ -0.47
NEDD4L-238ENST00000635997 C5orf66Q9H5L9 145 aa12.13□□□□□ -0.47
NEDD4L-238ENST00000635997 SH2D2AQ9NP31 389 aa12.13□□□□□ -0.47
NEDD4L-238ENST00000635997 ZNF107Q9UII5 783 aaPredicted RBP12.13□□□□□ -0.47
NEDD4L-238ENST00000635997 NAGKQ9UJ70 344 aa12.13□□□□□ -0.47
NEDD4L-238ENST00000635997 PRNDQ9UKY0 176 aa12.13□□□□□ -0.47
NEDD4L-238ENST00000635997 CBY3A6NI87 242 aa12.13□□□□□ -0.47
NEDD4L-238ENST00000635997 PGLYRP1O75594 196 aaPredicted RBP12.13□□□□□ -0.47
NEDD4L-238ENST00000635997 WNT5AP41221 380 aa12.13□□□□□ -0.47
NEDD4L-238ENST00000635997 LINC00596Q86U02 117 aa12.13□□□□□ -0.47
NEDD4L-238ENST00000635997 A0A0G2JK05 382 aa12.12□□□□□ -0.47
NEDD4L-238ENST00000635997 MMP7P09237 267 aaPredicted RBP12.12□□□□□ -0.47
NEDD4L-238ENST00000635997 Q5PR19 223 aa12.12□□□□□ -0.47
NEDD4L-238ENST00000635997 ASPHD2Q6ICH7 369 aa12.12□□□□□ -0.47
NEDD4L-238ENST00000635997 GGNQ86UU5 652 aa12.12□□□□□ -0.47
NEDD4L-238ENST00000635997 OR4X1Q8NH49 305 aa12.12□□□□□ -0.47
NEDD4L-238ENST00000635997 RSG1Q9BU20 258 aa12.12□□□□□ -0.47
NEDD4L-238ENST00000635997 OR51B2Q9Y5P1 312 aa12.12□□□□□ -0.47
NEDD4L-238ENST00000635997 IGKV1-9A0A0C4DH69 117 aa12.12□□□□□ -0.47
NEDD4L-238ENST00000635997 REG1AP05451 166 aa12.12□□□□□ -0.47
NEDD4L-238ENST00000635997 RPL29P47914 159 aaKnown RBP12.12□□□□□ -0.47
NEDD4L-238ENST00000635997 C3orf56Q8N813 242 aa12.12□□□□□ -0.47
NEDD4L-238ENST00000635997 NRIP2Q9BQI9 281 aa12.12□□□□□ -0.47
NEDD4L-238ENST00000635997 CLCF1Q9UBD9 225 aa12.12□□□□□ -0.47
NEDD4L-238ENST00000635997 K7EM74 188 aa12.12□□□□□ -0.47
NEDD4L-238ENST00000635997 MFNGO00587 321 aa12.12□□□□□ -0.47
NEDD4L-238ENST00000635997 GAPDHP04406 335 aaKnown RBP12.12□□□□□ -0.47
NEDD4L-238ENST00000635997 MUC1P15941 1255 aaPredicted RBP12.12□□□□□ -0.47
NEDD4L-238ENST00000635997 ATP6V0CP27449 155 aa12.12□□□□□ -0.47
NEDD4L-238ENST00000635997 RPL27AP46776 148 aaKnown RBP12.12□□□□□ -0.47
NEDD4L-238ENST00000635997 ABLIM2Q6H8Q1 611 aa12.12□□□□□ -0.47
NEDD4L-238ENST00000635997 WFIKKN1Q96NZ8 548 aa12.12□□□□□ -0.47
NEDD4L-238ENST00000635997 SOSTQ9BQB4 213 aa12.12□□□□□ -0.47
NEDD4L-238ENST00000635997 TMEM106BQ9NUM4 274 aa12.12□□□□□ -0.47
NEDD4L-238ENST00000635997 C5orf63A6NC05 138 aa12.12□□□□□ -0.47
NEDD4L-238ENST00000635997 CLPSP04118 112 aa12.12□□□□□ -0.47
NEDD4L-238ENST00000635997 SULT1A1P50225 295 aa12.12□□□□□ -0.47
NEDD4L-238ENST00000635997 DSCR9P59020 149 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms