RNA–Protein interactions for RNA: ENST00000634926.1

SMARCB1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 269 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-208ENST00000634926 ARPC1AQ92747 370 aa1.72□□□□□ -2.13
SMARCB1-208ENST00000634926 APOBEC3DQ96AK3 386 aaPredicted RBP1.72□□□□□ -2.13
SMARCB1-208ENST00000634926 C12orf43Q96C57 262 aaKnown RBP1.72□□□□□ -2.13
SMARCB1-208ENST00000634926 CMBLQ96DG6 245 aa1.72□□□□□ -2.13
SMARCB1-208ENST00000634926 SGTBQ96EQ0 304 aa1.72□□□□□ -2.13
SMARCB1-208ENST00000634926 MAGEB18Q96M61 343 aa1.72□□□□□ -2.13
SMARCB1-208ENST00000634926 Q96M85 177 aa1.72□□□□□ -2.13
SMARCB1-208ENST00000634926 OR8B2Q96RD0 313 aa1.72□□□□□ -2.13
SMARCB1-208ENST00000634926 RARRES2Q99969 163 aa1.72□□□□□ -2.13
SMARCB1-208ENST00000634926 ECSITQ9BQ95 431 aa1.72□□□□□ -2.13
SMARCB1-208ENST00000634926 NRIP2Q9BQI9 281 aa1.72□□□□□ -2.13
SMARCB1-208ENST00000634926 LCE3DQ9BYE3 92 aa1.72□□□□□ -2.13
SMARCB1-208ENST00000634926 ANKRD60Q9BZ19 345 aa1.72□□□□□ -2.13
SMARCB1-208ENST00000634926 OR51J1Q9H342 316 aa1.72□□□□□ -2.13
SMARCB1-208ENST00000634926 NMNAT1Q9HAN9 279 aaPredicted RBP1.72□□□□□ -2.13
SMARCB1-208ENST00000634926 TMEM27Q9HBJ8 222 aa1.72□□□□□ -2.13
SMARCB1-208ENST00000634926 CCNB1IP1Q9NPC3 277 aa1.72□□□□□ -2.13
SMARCB1-208ENST00000634926 MRPL22Q9NWU5 206 aaKnown RBP1.72□□□□□ -2.13
SMARCB1-208ENST00000634926 CCDC167Q9P0B6 97 aa1.72□□□□□ -2.13
SMARCB1-208ENST00000634926 PEF1Q9UBV8 284 aaKnown RBP1.72□□□□□ -2.13
SMARCB1-208ENST00000634926 CLN8Q9UBY8 286 aa1.72□□□□□ -2.13
SMARCB1-208ENST00000634926 CYB5R1Q9UHQ9 305 aa1.72□□□□□ -2.13
SMARCB1-208ENST00000634926 RPUSD1Q9UJJ7 312 aaKnown RBP1.72□□□□□ -2.13
SMARCB1-208ENST00000634926 ZNF222Q9UK12 451 aa1.72□□□□□ -2.13
SMARCB1-208ENST00000634926 SIGLEC7Q9Y286 467 aa1.72□□□□□ -2.13
SMARCB1-208ENST00000634926 CHTOPQ9Y3Y2 248 aaKnown RBP1.72□□□□□ -2.13
SMARCB1-208ENST00000634926 KPTNQ9Y664 436 aa1.72□□□□□ -2.13
SMARCB1-208ENST00000634926 CDH10Q9Y6N8 788 aa1.72□□□□□ -2.13
SMARCB1-208ENST00000634926 PKD1P98161 4303 aa1.71□□□□□ -2.14
SMARCB1-208ENST00000634926 A0A0G2JLM5 398 aa1.71□□□□□ -2.14
SMARCB1-208ENST00000634926 ZNF816-ZNF321PA0A0X1KG74 233 aa1.71□□□□□ -2.14
SMARCB1-208ENST00000634926 A0A1B0GVI7 797 aa1.71□□□□□ -2.14
SMARCB1-208ENST00000634926 CD300LBA8K4G0 201 aa1.71□□□□□ -2.14
SMARCB1-208ENST00000634926 BBIP1A8MTZ0 92 aa1.71□□□□□ -2.14
SMARCB1-208ENST00000634926 ODF3BA8MYP8 253 aa1.71□□□□□ -2.14
SMARCB1-208ENST00000634926 EVPLLA8MZ36 301 aa1.71□□□□□ -2.14
SMARCB1-208ENST00000634926 K7EIL1 84 aa1.71□□□□□ -2.14
SMARCB1-208ENST00000634926 M0R1W7 72 aa1.71□□□□□ -2.14
SMARCB1-208ENST00000634926 PPP1R2P9O14990 202 aa1.71□□□□□ -2.14
SMARCB1-208ENST00000634926 NPFFO15130 113 aa1.71□□□□□ -2.14
SMARCB1-208ENST00000634926 AKR7A2O43488 359 aa1.71□□□□□ -2.14
SMARCB1-208ENST00000634926 GMDSO60547 372 aa1.71□□□□□ -2.14
SMARCB1-208ENST00000634926 NPPAP01160 153 aa1.71□□□□□ -2.14
SMARCB1-208ENST00000634926 IGLV3-1P01715 115 aa1.71□□□□□ -2.14
SMARCB1-208ENST00000634926 PRB2P02812 416 aaPredicted RBP1.71□□□□□ -2.14
SMARCB1-208ENST00000634926 HLA-DPB1P04440 258 aa1.71□□□□□ -2.14
SMARCB1-208ENST00000634926 FBP1P09467 338 aa1.71□□□□□ -2.14
SMARCB1-208ENST00000634926 CHTF8P0CG12 524 aa1.71□□□□□ -2.14
SMARCB1-208ENST00000634926 MUC1P15941 1255 aaPredicted RBP1.71□□□□□ -2.14
SMARCB1-208ENST00000634926 CCNOP22674 350 aa1.71□□□□□ -2.14
SMARCB1-208ENST00000634926 DCKP27707 260 aa1.71□□□□□ -2.14
SMARCB1-208ENST00000634926 BTCP35070 178 aa1.71□□□□□ -2.14
SMARCB1-208ENST00000634926 TGFBR2P37173 567 aa1.71□□□□□ -2.14
SMARCB1-208ENST00000634926 GPR4P46093 362 aa1.71□□□□□ -2.14
SMARCB1-208ENST00000634926 CDKN1BP46527 198 aa1.71□□□□□ -2.14
SMARCB1-208ENST00000634926 OR1E2P47887 323 aa1.71□□□□□ -2.14
SMARCB1-208ENST00000634926 TGM4P49221 684 aa1.71□□□□□ -2.14
SMARCB1-208ENST00000634926 SRP9P49458 86 aaKnown RBP1.71□□□□□ -2.14
SMARCB1-208ENST00000634926 DLX6P56179 175 aa1.71□□□□□ -2.14
SMARCB1-208ENST00000634926 CAV3P56539 151 aa1.71□□□□□ -2.14
SMARCB1-208ENST00000634926 MAGOHP61326 146 aaKnown RBP1.71□□□□□ -2.14
SMARCB1-208ENST00000634926 ADARB1P78563 741 aaKnown RBP1.71□□□□□ -2.14
SMARCB1-208ENST00000634926 ZNF92Q03936 586 aa1.71□□□□□ -2.14
SMARCB1-208ENST00000634926 IFFO1Q0D2I5 559 aa1.71□□□□□ -2.14
SMARCB1-208ENST00000634926 KLRD1Q13241 179 aa1.71□□□□□ -2.14
SMARCB1-208ENST00000634926 DGCR6Q14129 220 aa1.71□□□□□ -2.14
SMARCB1-208ENST00000634926 HERPUD1Q15011 391 aa1.71□□□□□ -2.14
SMARCB1-208ENST00000634926 OR8B8Q15620 311 aa1.71□□□□□ -2.14
SMARCB1-208ENST00000634926 SGCAQ16586 387 aa1.71□□□□□ -2.14
SMARCB1-208ENST00000634926 TTMPQ5BVD1 217 aa1.71□□□□□ -2.14
SMARCB1-208ENST00000634926 OTPQ5XKR4 325 aa1.71□□□□□ -2.14
SMARCB1-208ENST00000634926 CTRB2Q6GPI1 263 aa1.71□□□□□ -2.14
SMARCB1-208ENST00000634926 OR2T2Q6IF00 324 aa1.71□□□□□ -2.14
SMARCB1-208ENST00000634926 NANOGP8Q6NSW7 305 aa1.71□□□□□ -2.14
SMARCB1-208ENST00000634926 ERICH5Q6P6B1 374 aa1.71□□□□□ -2.14
SMARCB1-208ENST00000634926 ARL9Q6T311 187 aa1.71□□□□□ -2.14
SMARCB1-208ENST00000634926 WDR82Q6UXN9 313 aa1.71□□□□□ -2.14
SMARCB1-208ENST00000634926 MBOAT2Q6ZWT7 520 aa1.71□□□□□ -2.14
SMARCB1-208ENST00000634926 TCF23Q7RTU1 214 aa1.71□□□□□ -2.14
SMARCB1-208ENST00000634926 VMO1Q7Z5L0 202 aa1.71□□□□□ -2.14
SMARCB1-208ENST00000634926 VTCN1Q7Z7D3 282 aa1.71□□□□□ -2.14
SMARCB1-208ENST00000634926 OR5AS1Q8N127 324 aa1.71□□□□□ -2.14
SMARCB1-208ENST00000634926 OR6V1Q8N148 313 aa1.71□□□□□ -2.14
SMARCB1-208ENST00000634926 DYNAPQ8N1N2 210 aa1.71□□□□□ -2.14
SMARCB1-208ENST00000634926 FAM216BQ8N7L0 139 aa1.71□□□□□ -2.14
SMARCB1-208ENST00000634926 HSD17B11Q8NBQ5 300 aa1.71□□□□□ -2.14
SMARCB1-208ENST00000634926 C19orf18Q8NEA5 215 aa1.71□□□□□ -2.14
SMARCB1-208ENST00000634926 WFDC9Q8NEX5 89 aa1.71□□□□□ -2.14
SMARCB1-208ENST00000634926 OR10G9Q8NGN4 311 aa1.71□□□□□ -2.14
SMARCB1-208ENST00000634926 OR1N2Q8NGR9 330 aa1.71□□□□□ -2.14
SMARCB1-208ENST00000634926 OR10A6Q8NH74 314 aa1.71□□□□□ -2.14
SMARCB1-208ENST00000634926 ANGPTL6Q8NI99 470 aa1.71□□□□□ -2.14
SMARCB1-208ENST00000634926 MARCH1Q8TCQ1 289 aa1.71□□□□□ -2.14
SMARCB1-208ENST00000634926 RASSF5Q8WWW0 418 aa1.71□□□□□ -2.14
SMARCB1-208ENST00000634926 MARC2Q969Z3 335 aa1.71□□□□□ -2.14
SMARCB1-208ENST00000634926 SGK3Q96BR1 496 aa1.71□□□□□ -2.14
SMARCB1-208ENST00000634926 RPUSD4Q96CM3 377 aaKnown RBP1.71□□□□□ -2.14
SMARCB1-208ENST00000634926 TMEM101Q96IK0 257 aa1.71□□□□□ -2.14
SMARCB1-208ENST00000634926 GAFA1Q96PS6 74 aa1.71□□□□□ -2.14
SMARCB1-208ENST00000634926 BCL7BQ9BQE9 202 aa1.71□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms