RNA–Protein interactions for RNA: ENST00000629427.2

SHPRH-211, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SHPRH, Length 7,338 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-211ENST00000629427 SERF2P84101 59 aa10.1□□□□□ -0.79
SHPRH-211ENST00000629427 RUNX1Q01196 453 aa10.1□□□□□ -0.79
SHPRH-211ENST00000629427 GPHA2Q96T91 129 aa10.1□□□□□ -0.79
SHPRH-211ENST00000629427 CLEC7AQ9BXN2 247 aa10.1□□□□□ -0.79
SHPRH-211ENST00000629427 RAB9AP51151 201 aa10.1□□□□□ -0.79
SHPRH-211ENST00000629427 ACSF3Q4G176 576 aaPredicted RBP10.1□□□□□ -0.79
SHPRH-211ENST00000629427 KCNK17Q96T54 332 aa10.1□□□□□ -0.79
SHPRH-211ENST00000629427 NEU1Q99519 415 aa10.1□□□□□ -0.79
SHPRH-211ENST00000629427 SRXN1Q9BYN0 137 aa10.1□□□□□ -0.79
SHPRH-211ENST00000629427 HS3ST3B1Q9Y662 390 aa10.1□□□□□ -0.79
SHPRH-211ENST00000629427 POLEQ07864 2286 aa10.1□□□□□ -0.79
SHPRH-211ENST00000629427 ACAA1P09110 424 aaPredicted RBP10.1□□□□□ -0.79
SHPRH-211ENST00000629427 TMEM91Q6ZNR0 172 aa10.1□□□□□ -0.79
SHPRH-211ENST00000629427 MAP1LC3AQ9H492 121 aa10.1□□□□□ -0.79
SHPRH-211ENST00000629427 ZNF430Q9H8G1 570 aaPredicted RBP10.1□□□□□ -0.79
SHPRH-211ENST00000629427 SCN5AQ14524 2016 aa10.1□□□□□ -0.79
SHPRH-211ENST00000629427 PHF3Q92576 2039 aaKnown RBP10.1□□□□□ -0.79
SHPRH-211ENST00000629427 A0A1W2PPC1 479 aa10.1□□□□□ -0.79
SHPRH-211ENST00000629427 PRSS2P07478 247 aa10.1□□□□□ -0.79
SHPRH-211ENST00000629427 DNLZQ5SXM8 178 aa10.1□□□□□ -0.79
SHPRH-211ENST00000629427 PNKDQ8N490 385 aa10.1□□□□□ -0.79
SHPRH-211ENST00000629427 KLK15Q9H2R5 256 aa10.1□□□□□ -0.79
SHPRH-211ENST00000629427 LY75O60449 1722 aa10.1□□□□□ -0.79
SHPRH-211ENST00000629427 A0A1W2PP11 408 aa10.1□□□□□ -0.79
SHPRH-211ENST00000629427 NPPCP23582 126 aa10.1□□□□□ -0.79
SHPRH-211ENST00000629427 TSPOP30536 169 aa10.1□□□□□ -0.79
SHPRH-211ENST00000629427 RND2P52198 227 aa10.1□□□□□ -0.79
SHPRH-211ENST00000629427 PQLC2Q6ZP29 291 aa10.1□□□□□ -0.79
SHPRH-211ENST00000629427 RHOVQ96L33 236 aa10.1□□□□□ -0.79
SHPRH-211ENST00000629427 PTP4A3O75365 173 aa10.09□□□□□ -0.79
SHPRH-211ENST00000629427 IGHV3-23P01764 117 aa10.09□□□□□ -0.79
SHPRH-211ENST00000629427 LCN2P80188 198 aa10.09□□□□□ -0.79
SHPRH-211ENST00000629427 FGFRL1Q8N441 504 aa10.09□□□□□ -0.79
SHPRH-211ENST00000629427 GPR61Q9BZJ8 451 aa10.09□□□□□ -0.79
SHPRH-211ENST00000629427 CHRNA10Q9GZZ6 450 aa10.09□□□□□ -0.79
SHPRH-211ENST00000629427 GEMIN7Q9H840 131 aaKnown RBP10.09□□□□□ -0.79
SHPRH-211ENST00000629427 DLL3Q9NYJ7 618 aa10.09□□□□□ -0.79
SHPRH-211ENST00000629427 DSPPQ9NZW4 1301 aa10.09□□□□□ -0.79
SHPRH-211ENST00000629427 IGHV3-35A0A0C4DH35 117 aa10.09□□□□□ -0.79
SHPRH-211ENST00000629427 NGFRP08138 427 aa10.09□□□□□ -0.79
SHPRH-211ENST00000629427 SLC25A47Q6Q0C1 308 aa10.09□□□□□ -0.79
SHPRH-211ENST00000629427 SGK494Q96LW2 274 aa10.09□□□□□ -0.79
SHPRH-211ENST00000629427 DNAJC4Q9NNZ3 241 aa10.09□□□□□ -0.79
SHPRH-211ENST00000629427 RALYQ9UKM9 306 aaKnown RBP10.09□□□□□ -0.79
SHPRH-211ENST00000629427 FXYD3Q14802 87 aa10.09□□□□□ -0.79
SHPRH-211ENST00000629427 PEAR1Q5VY43 1037 aaPredicted RBP10.09□□□□□ -0.79
SHPRH-211ENST00000629427 DNM1P46Q6ZS02 220 aa10.09□□□□□ -0.79
SHPRH-211ENST00000629427 LSM10Q969L4 123 aaKnown RBP10.09□□□□□ -0.79
SHPRH-211ENST00000629427 GPR82Q96P67 336 aa10.09□□□□□ -0.79
SHPRH-211ENST00000629427 GDF9O60383 454 aa10.09□□□□□ -0.79
SHPRH-211ENST00000629427 LMX1BO60663 402 aa10.09□□□□□ -0.79
SHPRH-211ENST00000629427 PCOLCEQ15113 449 aa10.09□□□□□ -0.79
SHPRH-211ENST00000629427 MEIG1Q5JSS6 88 aa10.09□□□□□ -0.79
SHPRH-211ENST00000629427 CYB561D1Q8N8Q1 229 aa10.09□□□□□ -0.79
SHPRH-211ENST00000629427 EPOPA6NHQ4 379 aa10.09□□□□□ -0.79
SHPRH-211ENST00000629427 SEC11BP0C7V7 166 aa10.09□□□□□ -0.79
SHPRH-211ENST00000629427 ARL14EPLP0DKL9 152 aa10.09□□□□□ -0.79
SHPRH-211ENST00000629427 LGALS3P17931 250 aaKnown RBP10.09□□□□□ -0.79
SHPRH-211ENST00000629427 APOBEC3AP31941 199 aaPredicted RBP10.09□□□□□ -0.79
SHPRH-211ENST00000629427 COMPP49747 757 aaPredicted RBP10.09□□□□□ -0.79
SHPRH-211ENST00000629427 TMEM74BQ9NUR3 256 aa10.09□□□□□ -0.79
SHPRH-211ENST00000629427 DOPEY2Q9Y3R5 2298 aa10.08□□□□□ -0.8
SHPRH-211ENST00000629427 ISG15P05161 165 aa10.08□□□□□ -0.8
SHPRH-211ENST00000629427 UNC119Q13432 240 aa10.08□□□□□ -0.8
SHPRH-211ENST00000629427 MIC13Q5XKP0 118 aa10.08□□□□□ -0.8
SHPRH-211ENST00000629427 PILRAQ9UKJ1 303 aa10.08□□□□□ -0.8
SHPRH-211ENST00000629427 RALGAPA2Q2PPJ7 1873 aa10.08□□□□□ -0.8
SHPRH-211ENST00000629427 IGHV3-66A0A0C4DH42 116 aa10.08□□□□□ -0.8
SHPRH-211ENST00000629427 ZIC3O60481 467 aa10.08□□□□□ -0.8
SHPRH-211ENST00000629427 PGLYRP1O75594 196 aaPredicted RBP10.08□□□□□ -0.8
SHPRH-211ENST00000629427 HOXB1P14653 301 aaPredicted RBP10.08□□□□□ -0.8
SHPRH-211ENST00000629427 FAM159AQ6UWV7 190 aa10.08□□□□□ -0.8
SHPRH-211ENST00000629427 ELOVL1Q9BW60 279 aa10.08□□□□□ -0.8
SHPRH-211ENST00000629427 OR5AC2Q9NZP5 309 aa10.08□□□□□ -0.8
SHPRH-211ENST00000629427 FOXJ2Q9P0K8 574 aa10.08□□□□□ -0.8
SHPRH-211ENST00000629427 B9A039 149 aa10.08□□□□□ -0.8
SHPRH-211ENST00000629427 ZNF25P17030 456 aaPredicted RBP10.08□□□□□ -0.8
SHPRH-211ENST00000629427 TMEM177Q53S58 311 aa10.08□□□□□ -0.8
SHPRH-211ENST00000629427 OR4A47Q6IF82 309 aa10.08□□□□□ -0.8
SHPRH-211ENST00000629427 DNASE2BQ8WZ79 361 aa10.08□□□□□ -0.8
SHPRH-211ENST00000629427 MBNL2Q5VZF2 373 aaKnown RBP10.08□□□□□ -0.8
SHPRH-211ENST00000629427 HIST1H4GQ99525 98 aa10.08□□□□□ -0.8
SHPRH-211ENST00000629427 ELOVL5Q9NYP7 299 aa10.08□□□□□ -0.8
SHPRH-211ENST00000629427 DIDO1Q9BTC0 2240 aaKnown RBP10.08□□□□□ -0.8
SHPRH-211ENST00000629427 TRGV3P03979 118 aa10.08□□□□□ -0.8
SHPRH-211ENST00000629427 SSBP3Q9BWW4 388 aaPredicted RBP10.08□□□□□ -0.8
SHPRH-211ENST00000629427 WNK3Q9BYP7 1800 aa10.08□□□□□ -0.8
SHPRH-211ENST00000629427 A0A1W2PRX2 142 aa10.07□□□□□ -0.8
SHPRH-211ENST00000629427 C1QCP02747 245 aa10.07□□□□□ -0.8
SHPRH-211ENST00000629427 SRSF12Q8WXF0 261 aaKnown RBP10.07□□□□□ -0.8
SHPRH-211ENST00000629427 CDC42EP3Q9UKI2 254 aa10.07□□□□□ -0.8
SHPRH-211ENST00000629427 MYLKQ15746 1914 aa10.07□□□□□ -0.8
SHPRH-211ENST00000629427 RPLP1P05386 114 aaKnown RBP10.07□□□□□ -0.8
SHPRH-211ENST00000629427 VAX1Q5SQQ9 334 aa10.07□□□□□ -0.8
SHPRH-211ENST00000629427 C9orf62Q8N4C0 152 aa10.07□□□□□ -0.8
SHPRH-211ENST00000629427 BCL2P10415 239 aa10.07□□□□□ -0.8
SHPRH-211ENST00000629427 MDKP21741 143 aaPredicted RBP10.07□□□□□ -0.8
SHPRH-211ENST00000629427 ZNF383Q8NA42 475 aa10.07□□□□□ -0.8
SHPRH-211ENST00000629427 LCTP09848 1927 aa10.07□□□□□ -0.8
SHPRH-211ENST00000629427 OR51G1Q8NGK1 321 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms