RNA–Protein interactions for RNA: ENST00000627620.2

SCN8A-209, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN8A, Length 5,943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-209ENST00000627620 LSM10Q969L4 123 aaKnown RBP10.95□□□□□ -0.66
SCN8A-209ENST00000627620 TMEM186Q96B77 213 aa10.95□□□□□ -0.66
SCN8A-209ENST00000627620 TRAV30A0A087WSZ9 112 aa10.95□□□□□ -0.66
SCN8A-209ENST00000627620 KLF4O43474 513 aa10.95□□□□□ -0.66
SCN8A-209ENST00000627620 ZNF207O43670 478 aaKnown RBP10.95□□□□□ -0.66
SCN8A-209ENST00000627620 RFPL3SP0C7P2 107 aa10.95□□□□□ -0.66
SCN8A-209ENST00000627620 VKORC1L1Q8N0U8 176 aa10.95□□□□□ -0.66
SCN8A-209ENST00000627620 DDB2Q92466 427 aa10.95□□□□□ -0.66
SCN8A-209ENST00000627620 CLEC7AQ9BXN2 247 aa10.95□□□□□ -0.66
SCN8A-209ENST00000627620 RTN4RQ9BZR6 473 aa10.95□□□□□ -0.66
SCN8A-209ENST00000627620 MYO16Q9Y6X6 1858 aa10.95□□□□□ -0.66
SCN8A-209ENST00000627620 LNP1A1A4G5 178 aa10.95□□□□□ -0.66
SCN8A-209ENST00000627620 ZIC3O60481 467 aa10.95□□□□□ -0.66
SCN8A-209ENST00000627620 CKS2P33552 79 aa10.95□□□□□ -0.66
SCN8A-209ENST00000627620 COMPP49747 757 aaPredicted RBP10.95□□□□□ -0.66
SCN8A-209ENST00000627620 FAM106AQ4KMX7 169 aa10.95□□□□□ -0.66
SCN8A-209ENST00000627620 PET117Q6UWS5 81 aa10.95□□□□□ -0.66
SCN8A-209ENST00000627620 OR5P3Q8WZ94 311 aa10.95□□□□□ -0.66
SCN8A-209ENST00000627620 H3BVH4 76 aa10.94□□□□□ -0.66
SCN8A-209ENST00000627620 M0QZK8 103 aa10.94□□□□□ -0.66
SCN8A-209ENST00000627620 GGCTO75223 188 aaKnown RBP10.94□□□□□ -0.66
SCN8A-209ENST00000627620 MT-ND6P03923 174 aa10.94□□□□□ -0.66
SCN8A-209ENST00000627620 Q6ZT83 130 aa10.94□□□□□ -0.66
SCN8A-209ENST00000627620 OR4B1Q8NGF8 309 aa10.94□□□□□ -0.66
SCN8A-209ENST00000627620 AQP10Q96PS8 301 aa10.94□□□□□ -0.66
SCN8A-209ENST00000627620 CDC42EP3Q9UKI2 254 aa10.94□□□□□ -0.66
SCN8A-209ENST00000627620 LBHQ53QV2 105 aaPredicted RBP10.94□□□□□ -0.66
SCN8A-209ENST00000627620 PNKDQ8N490 385 aa10.94□□□□□ -0.66
SCN8A-209ENST00000627620 LINC01560Q8TB33 94 aa10.94□□□□□ -0.66
SCN8A-209ENST00000627620 KBTBD11O94819 623 aa10.94□□□□□ -0.66
SCN8A-209ENST00000627620 LIPFP07098 398 aa10.94□□□□□ -0.66
SCN8A-209ENST00000627620 ATP5G2Q06055 141 aa10.94□□□□□ -0.66
SCN8A-209ENST00000627620 C19orf48Q6RUI8 117 aa10.94□□□□□ -0.66
SCN8A-209ENST00000627620 MIEN1Q9BRT3 115 aa10.94□□□□□ -0.66
SCN8A-209ENST00000627620 ATG101Q9BSB4 218 aa10.94□□□□□ -0.66
SCN8A-209ENST00000627620 ELOVL5Q9NYP7 299 aa10.94□□□□□ -0.66
SCN8A-209ENST00000627620 RALYQ9UKM9 306 aaKnown RBP10.94□□□□□ -0.66
SCN8A-209ENST00000627620 TCF19Q9Y242 345 aa10.94□□□□□ -0.66
SCN8A-209ENST00000627620 TMEM14DPA8MWL7 114 aa10.94□□□□□ -0.66
SCN8A-209ENST00000627620 C8orf88P0DMB2 117 aa10.94□□□□□ -0.66
SCN8A-209ENST00000627620 SMIM12Q96EX1 92 aa10.94□□□□□ -0.66
SCN8A-209ENST00000627620 B9A039 149 aa10.94□□□□□ -0.66
SCN8A-209ENST00000627620 ZNF324O75467 553 aaPredicted RBP10.94□□□□□ -0.66
SCN8A-209ENST00000627620 CD74P04233 296 aa10.94□□□□□ -0.66
SCN8A-209ENST00000627620 CD81P60033 236 aa10.94□□□□□ -0.66
SCN8A-209ENST00000627620 PSG9Q00887 426 aa10.94□□□□□ -0.66
SCN8A-209ENST00000627620 APCDD1LQ8NCL9 501 aa10.94□□□□□ -0.66
SCN8A-209ENST00000627620 ZCCHC14Q8WYQ9 949 aaKnown RBP10.94□□□□□ -0.66
SCN8A-209ENST00000627620 SIGLEC12Q96PQ1 595 aa10.94□□□□□ -0.66
SCN8A-209ENST00000627620 LOC390937A0A1W2PQ73 354 aa10.93□□□□□ -0.66
SCN8A-209ENST00000627620 NPIPB13A6NJU9 1138 aa10.93□□□□□ -0.66
SCN8A-209ENST00000627620 NPIPB4C9JG80 1138 aa10.93□□□□□ -0.66
SCN8A-209ENST00000627620 PDLIM4P50479 330 aa10.93□□□□□ -0.66
SCN8A-209ENST00000627620 KLRB1Q12918 225 aa10.93□□□□□ -0.66
SCN8A-209ENST00000627620 C19orf54Q5BKX5 351 aa10.93□□□□□ -0.66
SCN8A-209ENST00000627620 LAMTOR1Q6IAA8 161 aa10.93□□□□□ -0.66
SCN8A-209ENST00000627620 CHRNA10Q9GZZ6 450 aa10.93□□□□□ -0.66
SCN8A-209ENST00000627620 CHCHD2Q9Y6H1 151 aaPredicted RBP10.93□□□□□ -0.66
SCN8A-209ENST00000627620 ANKRD31Q8N7Z5 1873 aa10.93□□□□□ -0.66
SCN8A-209ENST00000627620 HAX1O00165 279 aa10.93□□□□□ -0.66
SCN8A-209ENST00000627620 UBE2L6O14933 153 aa10.93□□□□□ -0.66
SCN8A-209ENST00000627620 ARL14EPLP0DKL9 152 aa10.93□□□□□ -0.66
SCN8A-209ENST00000627620 CSRP3P50461 194 aa10.93□□□□□ -0.66
SCN8A-209ENST00000627620 AMMECR1LQ6DCA0 310 aa10.93□□□□□ -0.66
SCN8A-209ENST00000627620 DNM1P46Q6ZS02 220 aa10.93□□□□□ -0.66
SCN8A-209ENST00000627620 GCSHP23434 173 aa10.93□□□□□ -0.66
SCN8A-209ENST00000627620 PKIAP61925 76 aa10.93□□□□□ -0.66
SCN8A-209ENST00000627620 RPS11P62280 158 aaKnown RBP eCLIP10.93□□□□□ -0.66
SCN8A-209ENST00000627620 TMEM45BQ96B21 275 aa10.93□□□□□ -0.66
SCN8A-209ENST00000627620 PGLYRP4Q96LB8 373 aa10.93□□□□□ -0.66
SCN8A-209ENST00000627620 LINC00470Q9BZP3 86 aa10.93□□□□□ -0.66
SCN8A-209ENST00000627620 ZNF703Q9H7S9 590 aaPredicted RBP10.93□□□□□ -0.66
SCN8A-209ENST00000627620 ICE1Q9Y2F5 2266 aa10.93□□□□□ -0.66
SCN8A-209ENST00000627620 NPIPB6E9PJ23 425 aa10.93□□□□□ -0.66
SCN8A-209ENST00000627620 RAMP1O60894 148 aa10.93□□□□□ -0.66
SCN8A-209ENST00000627620 CELA3AP09093 270 aa10.93□□□□□ -0.66
SCN8A-209ENST00000627620 TMEM187Q14656 261 aa10.93□□□□□ -0.66
SCN8A-209ENST00000627620 TMEM30BQ3MIR4 351 aa10.93□□□□□ -0.66
SCN8A-209ENST00000627620 FAM53AQ6NSI3 398 aaPredicted RBP10.93□□□□□ -0.66
SCN8A-209ENST00000627620 DRAM1Q8N682 238 aa10.93□□□□□ -0.66
SCN8A-209ENST00000627620 OR51M1Q9H341 326 aa10.93□□□□□ -0.66
SCN8A-209ENST00000627620 KIF13BQ9NQT8 1826 aa10.93□□□□□ -0.66
SCN8A-209ENST00000627620 J3QW42 95 aa10.93□□□□□ -0.66
SCN8A-209ENST00000627620 EIF3GO75821 320 aaKnown RBP eCLIP10.93□□□□□ -0.66
SCN8A-209ENST00000627620 STAG3L2P0CL84 134 aa10.93□□□□□ -0.66
SCN8A-209ENST00000627620 TRGC2P03986 189 aa10.92□□□□□ -0.66
SCN8A-209ENST00000627620 TMEM177Q53S58 311 aa10.92□□□□□ -0.66
SCN8A-209ENST00000627620 ZNRF1Q8ND25 227 aa10.92□□□□□ -0.66
SCN8A-209ENST00000627620 OR51G1Q8NGK1 321 aa10.92□□□□□ -0.66
SCN8A-209ENST00000627620 HSPB9Q9BQS6 159 aa10.92□□□□□ -0.66
SCN8A-209ENST00000627620 SVILO95425 2214 aa10.92□□□□□ -0.66
SCN8A-209ENST00000627620 IGHV3OR16-10A0A075B7F0 116 aa10.92□□□□□ -0.66
SCN8A-209ENST00000627620 H2BFSP57053 126 aa10.92□□□□□ -0.66
SCN8A-209ENST00000627620 FXYD3Q14802 87 aa10.92□□□□□ -0.66
SCN8A-209ENST00000627620 CCL19Q99731 98 aa10.92□□□□□ -0.66
SCN8A-209ENST00000627620 PHLDA3Q9Y5J5 127 aa10.92□□□□□ -0.66
SCN8A-209ENST00000627620 SPTA1P02549 2419 aa10.92□□□□□ -0.66
SCN8A-209ENST00000627620 ATAD5Q96QE3 1844 aa10.92□□□□□ -0.66
SCN8A-209ENST00000627620 H3BTX0 84 aa10.92□□□□□ -0.66
SCN8A-209ENST00000627620 ACSF3Q4G176 576 aaPredicted RBP10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms