RNA–Protein interactions for RNA: ENST00000627587.2

PDLIM5-223, Transcript of PDZ and LIM domain 5, human

TSL 2

Gene PDLIM5, Length 1,853 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PDLIM5-223	ENST00000627587	NARFL	Q9H6Q4	476 aa		7.75	□□□□□ -1.17
PDLIM5-223	ENST00000627587	FAM212B	Q9NTI7	297 aa	Predicted RBP	7.75	□□□□□ -1.17
PDLIM5-223	ENST00000627587	ZFP57	Q9NU63	452 aa		7.75	□□□□□ -1.17
PDLIM5-223	ENST00000627587	MBD2	Q9UBB5	411 aa		7.75	□□□□□ -1.17
PDLIM5-223	ENST00000627587	PPIAL4C	A0A0B4J2A2	164 aa		7.75	□□□□□ -1.17
PDLIM5-223	ENST00000627587	RNF222	A6NCQ9	220 aa		7.75	□□□□□ -1.17
PDLIM5-223	ENST00000627587	C17orf98	A8MV24	154 aa		7.75	□□□□□ -1.17
PDLIM5-223	ENST00000627587	VWC2L	B2RUY7	222 aa		7.75	□□□□□ -1.17
PDLIM5-223	ENST00000627587		M0R1X1	148 aa		7.75	□□□□□ -1.17
PDLIM5-223	ENST00000627587	KCNAB3	O43448	404 aa		7.75	□□□□□ -1.17
PDLIM5-223	ENST00000627587	ATG12	O94817	140 aa		7.75	□□□□□ -1.17
PDLIM5-223	ENST00000627587	SCGB1D2	O95969	90 aa		7.75	□□□□□ -1.17
PDLIM5-223	ENST00000627587	IGKV1-5	P01602	117 aa		7.75	□□□□□ -1.17
PDLIM5-223	ENST00000627587	RLN2	P04090	185 aa		7.75	□□□□□ -1.17
PDLIM5-223	ENST00000627587	PPIAL4G	P0DN37	164 aa		7.75	□□□□□ -1.17
PDLIM5-223	ENST00000627587	LYL1	P12980	280 aa		7.75	□□□□□ -1.17
PDLIM5-223	ENST00000627587	DUT	P33316	252 aa	Known RBP	7.75	□□□□□ -1.17
PDLIM5-223	ENST00000627587	LPAR6	P43657	344 aa		7.75	□□□□□ -1.17
PDLIM5-223	ENST00000627587	SMCO1	Q147U7	214 aa		7.75	□□□□□ -1.17
PDLIM5-223	ENST00000627587	OR2B11	Q5JQS5	317 aa		7.75	□□□□□ -1.17
PDLIM5-223	ENST00000627587	PRSS54	Q6PEW0	395 aa		7.75	□□□□□ -1.17
PDLIM5-223	ENST00000627587	C8orf46	Q8TAG6	207 aa		7.75	□□□□□ -1.17
PDLIM5-223	ENST00000627587	RBMXL1	Q96E39	390 aa	Known RBP	7.75	□□□□□ -1.17
PDLIM5-223	ENST00000627587	RRNAD1	Q96FB5	475 aa	Known RBP	7.75	□□□□□ -1.17
PDLIM5-223	ENST00000627587	SSBP3	Q9BWW4	388 aa	Predicted RBP	7.75	□□□□□ -1.17
PDLIM5-223	ENST00000627587	GON7	Q9BXV9	100 aa		7.75	□□□□□ -1.17
PDLIM5-223	ENST00000627587	OR5AC2	Q9NZP5	309 aa		7.75	□□□□□ -1.17
PDLIM5-223	ENST00000627587	TET2	Q6N021	2002 aa	Predicted RBP	7.74	□□□□□ -1.17
PDLIM5-223	ENST00000627587	SAA2-SAA4	A0A096LPE2	208 aa		7.74	□□□□□ -1.17
PDLIM5-223	ENST00000627587	hCG_1809904	A0A1W2PP81	198 aa		7.74	□□□□□ -1.17
PDLIM5-223	ENST00000627587		A0A1W2PPE2	198 aa		7.74	□□□□□ -1.17
PDLIM5-223	ENST00000627587		A0A1W2PR64	198 aa		7.74	□□□□□ -1.17
PDLIM5-223	ENST00000627587		A0A1W2PRV1	198 aa		7.74	□□□□□ -1.17
PDLIM5-223	ENST00000627587	C22orf46	C9J442	243 aa		7.74	□□□□□ -1.17
PDLIM5-223	ENST00000627587	TSC22D2	O75157	780 aa		7.74	□□□□□ -1.17
PDLIM5-223	ENST00000627587	LIPF	P07098	398 aa		7.74	□□□□□ -1.17
PDLIM5-223	ENST00000627587	SAA2	P0DJI9	122 aa	Predicted RBP	7.74	□□□□□ -1.17
PDLIM5-223	ENST00000627587	IGHV1-8	P0DP01	117 aa		7.74	□□□□□ -1.17
PDLIM5-223	ENST00000627587	DLX1	P56177	255 aa		7.74	□□□□□ -1.17
PDLIM5-223	ENST00000627587	ZNF816	Q0VGE8	651 aa	Predicted RBP	7.74	□□□□□ -1.17
PDLIM5-223	ENST00000627587	IZUMO4	Q1ZYL8	232 aa		7.74	□□□□□ -1.17
PDLIM5-223	ENST00000627587	NCR3LG1	Q68D85	454 aa		7.74	□□□□□ -1.17
PDLIM5-223	ENST00000627587		Q6ZRM9	215 aa		7.74	□□□□□ -1.17
PDLIM5-223	ENST00000627587	FOXRED2	Q8IWF2	684 aa		7.74	□□□□□ -1.17
PDLIM5-223	ENST00000627587	INO80E	Q8NBZ0	244 aa	Predicted RBP	7.74	□□□□□ -1.17
PDLIM5-223	ENST00000627587	LY6G5B	Q8NDX9	201 aa		7.74	□□□□□ -1.17
PDLIM5-223	ENST00000627587	OR4D5	Q8NGN0	318 aa		7.74	□□□□□ -1.17
PDLIM5-223	ENST00000627587	DDB2	Q92466	427 aa		7.74	□□□□□ -1.17
PDLIM5-223	ENST00000627587	DCUN1D4	Q92564	292 aa		7.74	□□□□□ -1.17
PDLIM5-223	ENST00000627587	LSM10	Q969L4	123 aa	Known RBP	7.74	□□□□□ -1.17
PDLIM5-223	ENST00000627587	S1PR3	Q99500	378 aa		7.74	□□□□□ -1.17
PDLIM5-223	ENST00000627587	SLA2	Q9H6Q3	261 aa		7.74	□□□□□ -1.17
PDLIM5-223	ENST00000627587	TNFSF18	Q9UNG2	199 aa		7.74	□□□□□ -1.17
PDLIM5-223	ENST00000627587	PRELID3B	Q9Y3B1	194 aa		7.74	□□□□□ -1.17
PDLIM5-223	ENST00000627587		A0A087X0M5	115 aa		7.73	□□□□□ -1.17
PDLIM5-223	ENST00000627587		A0A0D9SG52	128 aa		7.73	□□□□□ -1.17
PDLIM5-223	ENST00000627587		A0A1B0GX30	115 aa		7.73	□□□□□ -1.17
PDLIM5-223	ENST00000627587	OR2F2	O95006	317 aa		7.73	□□□□□ -1.17
PDLIM5-223	ENST00000627587	MBP	P02686	304 aa	Predicted RBP	7.73	□□□□□ -1.17
PDLIM5-223	ENST00000627587	RBP4	P02753	201 aa		7.73	□□□□□ -1.17
PDLIM5-223	ENST00000627587		P0C879	139 aa		7.73	□□□□□ -1.17
PDLIM5-223	ENST00000627587	SLC25A6	P12236	298 aa		7.73	□□□□□ -1.17
PDLIM5-223	ENST00000627587	S100A11	P31949	105 aa		7.73	□□□□□ -1.17
PDLIM5-223	ENST00000627587	NUP62	P37198	522 aa	Predicted RBP	7.73	□□□□□ -1.17
PDLIM5-223	ENST00000627587	KIR2DS2	P43631	304 aa		7.73	□□□□□ -1.17
PDLIM5-223	ENST00000627587	NKX2-1	P43699	371 aa	Predicted RBP	7.73	□□□□□ -1.17
PDLIM5-223	ENST00000627587	AP2S1	P53680	142 aa	Predicted RBP	7.73	□□□□□ -1.17
PDLIM5-223	ENST00000627587	OR2F1	Q13607	317 aa		7.73	□□□□□ -1.17
PDLIM5-223	ENST00000627587	ZNF345	Q14585	488 aa		7.73	□□□□□ -1.17
PDLIM5-223	ENST00000627587	FAM120AOS	Q5T036	256 aa		7.73	□□□□□ -1.17
PDLIM5-223	ENST00000627587	C8orf31	Q8N9H6	132 aa		7.73	□□□□□ -1.17
PDLIM5-223	ENST00000627587	ZNF596	Q8TC21	504 aa		7.73	□□□□□ -1.17
PDLIM5-223	ENST00000627587	ADTRP	Q96IZ2	230 aa		7.73	□□□□□ -1.17
PDLIM5-223	ENST00000627587	BPESC1	Q9GZL8	116 aa		7.73	□□□□□ -1.17
PDLIM5-223	ENST00000627587	ARL6	Q9H0F7	186 aa		7.73	□□□□□ -1.17
PDLIM5-223	ENST00000627587	C11orf1	Q9H5F2	150 aa		7.73	□□□□□ -1.17
PDLIM5-223	ENST00000627587	LSM5	Q9Y4Y9	91 aa	Known RBP	7.73	□□□□□ -1.17
PDLIM5-223	ENST00000627587	SESN1	Q9Y6P5	492 aa		7.73	□□□□□ -1.17
PDLIM5-223	ENST00000627587	LOC105371242	A0A075B767	164 aa		7.72	□□□□□ -1.17
PDLIM5-223	ENST00000627587		A0A1B0GU03	582 aa		7.72	□□□□□ -1.17
PDLIM5-223	ENST00000627587	MSGN1	A6NI15	193 aa		7.72	□□□□□ -1.17
PDLIM5-223	ENST00000627587		J3QR06	171 aa		7.72	□□□□□ -1.17
PDLIM5-223	ENST00000627587	RGS13	O14921	159 aa		7.72	□□□□□ -1.17
PDLIM5-223	ENST00000627587	ST8SIA3	O43173	380 aa		7.72	□□□□□ -1.17
PDLIM5-223	ENST00000627587	FCGR3B	O75015	233 aa		7.72	□□□□□ -1.17
PDLIM5-223	ENST00000627587	PITX3	O75364	302 aa		7.72	□□□□□ -1.17
PDLIM5-223	ENST00000627587	DEDD	O75618	318 aa		7.72	□□□□□ -1.17
PDLIM5-223	ENST00000627587	S1PR2	O95136	353 aa		7.72	□□□□□ -1.17
PDLIM5-223	ENST00000627587	EPHA1	P21709	976 aa		7.72	□□□□□ -1.17
PDLIM5-223	ENST00000627587	THBS3	P49746	956 aa		7.72	□□□□□ -1.17
PDLIM5-223	ENST00000627587	OPCML	Q14982	345 aa		7.72	□□□□□ -1.17
PDLIM5-223	ENST00000627587	ACOT7L	Q6ZUV0	252 aa		7.72	□□□□□ -1.17
PDLIM5-223	ENST00000627587	TMUB2	Q71RG4	321 aa		7.72	□□□□□ -1.17
PDLIM5-223	ENST00000627587	ABHD12	Q8N2K0	398 aa		7.72	□□□□□ -1.17
PDLIM5-223	ENST00000627587	LINC00311	Q8N616	119 aa		7.72	□□□□□ -1.17
PDLIM5-223	ENST00000627587	OR10X1	Q8NGY0	326 aa		7.72	□□□□□ -1.17
PDLIM5-223	ENST00000627587	OR9G1	Q8NH87	305 aa		7.72	□□□□□ -1.17
PDLIM5-223	ENST00000627587	OR1S1	Q8NH92	325 aa		7.72	□□□□□ -1.17
PDLIM5-223	ENST00000627587	GPR146	Q96CH1	333 aa		7.72	□□□□□ -1.17
PDLIM5-223	ENST00000627587	TMEM133	Q9H2Q1	129 aa		7.72	□□□□□ -1.17

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