RNA–Protein interactions for RNA: ENST00000621870.4

GGA3-223, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 1 (best)

Gene GGA3, Length 4,034 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-223ENST00000621870 OR4A5Q8NH83 315 aa7.84□□□□□ -1.15
GGA3-223ENST00000621870 DPM3Q9P2X0 92 aa7.84□□□□□ -1.15
GGA3-223ENST00000621870 JPT1Q9UK76 154 aa7.84□□□□□ -1.15
GGA3-223ENST00000621870 HEATR5AQ86XA9 2040 aa7.84□□□□□ -1.15
GGA3-223ENST00000621870 A0A1B0GTI1 187 aa7.84□□□□□ -1.15
GGA3-223ENST00000621870 SHISA3A0PJX4 238 aa7.84□□□□□ -1.15
GGA3-223ENST00000621870 C12orf77C9JDV5 145 aa7.84□□□□□ -1.15
GGA3-223ENST00000621870 G3V3Q6 166 aa7.84□□□□□ -1.15
GGA3-223ENST00000621870 PPP1R2P9O14990 202 aa7.84□□□□□ -1.15
GGA3-223ENST00000621870 ZNF737O75373 536 aa7.84□□□□□ -1.15
GGA3-223ENST00000621870 OR2J3O76001 311 aa7.84□□□□□ -1.15
GGA3-223ENST00000621870 RNFT1Q5M7Z0 435 aa7.84□□□□□ -1.15
GGA3-223ENST00000621870 ARTNQ5T4W7 220 aa7.84□□□□□ -1.15
GGA3-223ENST00000621870 WDFY1Q8IWB7 410 aa7.84□□□□□ -1.15
GGA3-223ENST00000621870 OR4C13Q8NGP0 309 aa7.84□□□□□ -1.15
GGA3-223ENST00000621870 POM121Q96HA1 1249 aa7.84□□□□□ -1.15
GGA3-223ENST00000621870 WFIKKN1Q96NZ8 548 aa7.84□□□□□ -1.15
GGA3-223ENST00000621870 CLCF1Q9UBD9 225 aa7.84□□□□□ -1.15
GGA3-223ENST00000621870 GPR132Q9UNW8 380 aa7.84□□□□□ -1.15
GGA3-223ENST00000621870 MARCH11A6NNE9 402 aa7.84□□□□□ -1.15
GGA3-223ENST00000621870 PGLYRP1O75594 196 aaPredicted RBP7.84□□□□□ -1.15
GGA3-223ENST00000621870 REG1AP05451 166 aa7.84□□□□□ -1.15
GGA3-223ENST00000621870 P2RY1P47900 373 aa7.84□□□□□ -1.15
GGA3-223ENST00000621870 PDZD11Q5EBL8 140 aa7.84□□□□□ -1.15
GGA3-223ENST00000621870 TMEM140Q9NV12 185 aa7.84□□□□□ -1.15
GGA3-223ENST00000621870 SIP14410 1827 aa7.83□□□□□ -1.16
GGA3-223ENST00000621870 IGHV1-18A0A0C4DH31 117 aa7.83□□□□□ -1.16
GGA3-223ENST00000621870 RNASEK-C17orf49H0YIS7 233 aa7.83□□□□□ -1.16
GGA3-223ENST00000621870 OR10J1P30954 320 aa7.83□□□□□ -1.16
GGA3-223ENST00000621870 PPOXP50336 477 aa7.83□□□□□ -1.16
GGA3-223ENST00000621870 RND2P52198 227 aa7.83□□□□□ -1.16
GGA3-223ENST00000621870 NHLH2Q02577 135 aa7.83□□□□□ -1.16
GGA3-223ENST00000621870 AANATQ16613 207 aa7.83□□□□□ -1.16
GGA3-223ENST00000621870 ZNF645Q8N7E2 425 aa7.83□□□□□ -1.16
GGA3-223ENST00000621870 ATP5SQ99766 215 aa7.83□□□□□ -1.16
GGA3-223ENST00000621870 CBLN4Q9NTU7 201 aa7.83□□□□□ -1.16
GGA3-223ENST00000621870 LY6G6EA0A0G2JKS1 128 aa7.83□□□□□ -1.16
GGA3-223ENST00000621870 CEACAM18A8MTB9 384 aa7.83□□□□□ -1.16
GGA3-223ENST00000621870 KCNAB3O43448 404 aa7.83□□□□□ -1.16
GGA3-223ENST00000621870 ZNF250P15622 560 aa7.83□□□□□ -1.16
GGA3-223ENST00000621870 GNG4P50150 75 aa7.83□□□□□ -1.16
GGA3-223ENST00000621870 RPL39P5Q59GN2 51 aa7.83□□□□□ -1.16
GGA3-223ENST00000621870 LRP11Q86VZ4 500 aa7.83□□□□□ -1.16
GGA3-223ENST00000621870 DRAM1Q8N682 238 aa7.83□□□□□ -1.16
GGA3-223ENST00000621870 TMEM186Q96B77 213 aa7.83□□□□□ -1.16
GGA3-223ENST00000621870 TMEM222Q9H0R3 208 aa7.83□□□□□ -1.16
GGA3-223ENST00000621870 ZNF319Q9P2F9 582 aa7.83□□□□□ -1.16
GGA3-223ENST00000621870 U3KQA8 63 aa7.83□□□□□ -1.16
GGA3-223ENST00000621870 TFF1P04155 84 aa7.83□□□□□ -1.16
GGA3-223ENST00000621870 TPPP2P59282 170 aa7.83□□□□□ -1.16
GGA3-223ENST00000621870 RANP62826 216 aaKnown RBP7.83□□□□□ -1.16
GGA3-223ENST00000621870 RUNX1Q01196 453 aa7.83□□□□□ -1.16
GGA3-223ENST00000621870 OR13A1Q8NGR1 328 aa7.83□□□□□ -1.16
GGA3-223ENST00000621870 TXN2Q99757 166 aa7.83□□□□□ -1.16
GGA3-223ENST00000621870 AUP1Q9Y679 476 aa7.83□□□□□ -1.16
GGA3-223ENST00000621870 IGHV3OR16-13A0A075B7E8 117 aa7.82□□□□□ -1.16
GGA3-223ENST00000621870 IGKV3D-15A0A087WSY6 115 aa7.82□□□□□ -1.16
GGA3-223ENST00000621870 A0A087WV48 116 aa7.82□□□□□ -1.16
GGA3-223ENST00000621870 IGHV3-74A0A0B4J1X5 117 aa7.82□□□□□ -1.16
GGA3-223ENST00000621870 H0Y980 276 aa7.82□□□□□ -1.16
GGA3-223ENST00000621870 OR2A4O95047 310 aa7.82□□□□□ -1.16
GGA3-223ENST00000621870 S1PR2O95136 353 aa7.82□□□□□ -1.16
GGA3-223ENST00000621870 SPCS3P61009 180 aa7.82□□□□□ -1.16
GGA3-223ENST00000621870 C10orf113Q5VZT2 155 aa7.82□□□□□ -1.16
GGA3-223ENST00000621870 SLC35E4Q6ICL7 350 aa7.82□□□□□ -1.16
GGA3-223ENST00000621870 ZNF429Q86V71 674 aa7.82□□□□□ -1.16
GGA3-223ENST00000621870 RBM14Q96PK6 669 aaKnown RBP7.82□□□□□ -1.16
GGA3-223ENST00000621870 OR2A7Q96R45 310 aa7.82□□□□□ -1.16
GGA3-223ENST00000621870 SDHCQ99643 169 aaPredicted RBP7.82□□□□□ -1.16
GGA3-223ENST00000621870 SOSTQ9BQB4 213 aa7.82□□□□□ -1.16
GGA3-223ENST00000621870 NKX6-2Q9C056 277 aaPredicted RBP7.82□□□□□ -1.16
GGA3-223ENST00000621870 WDR61Q9GZS3 305 aaKnown RBP7.82□□□□□ -1.16
GGA3-223ENST00000621870 NPVFQ9HCQ7 196 aa7.82□□□□□ -1.16
GGA3-223ENST00000621870 GAR1Q9NY12 217 aaKnown RBP7.82□□□□□ -1.16
GGA3-223ENST00000621870 IQCF6A8MYZ5 107 aa7.82□□□□□ -1.16
GGA3-223ENST00000621870 MFNGO00587 321 aa7.82□□□□□ -1.16
GGA3-223ENST00000621870 KBTBD11O94819 623 aa7.82□□□□□ -1.16
GGA3-223ENST00000621870 VSIG10L2P0DP72 767 aa7.82□□□□□ -1.16
GGA3-223ENST00000621870 CD1BP29016 333 aa7.82□□□□□ -1.16
GGA3-223ENST00000621870 FXYD3Q14802 87 aa7.82□□□□□ -1.16
GGA3-223ENST00000621870 TMEM252Q8N6L7 170 aa7.82□□□□□ -1.16
GGA3-223ENST00000621870 POC1AQ8NBT0 407 aa7.82□□□□□ -1.16
GGA3-223ENST00000621870 ZDHHC11Q9H8X9 412 aa7.82□□□□□ -1.16
GGA3-223ENST00000621870 C2CD3Q4AC94 2353 aa7.82□□□□□ -1.16
GGA3-223ENST00000621870 A0A0G2JNJ9 132 aa7.82□□□□□ -1.16
GGA3-223ENST00000621870 PROB1E7EW31 1015 aa7.82□□□□□ -1.16
GGA3-223ENST00000621870 LYPD3O95274 346 aa7.82□□□□□ -1.16
GGA3-223ENST00000621870 FAM157CP0CG43 387 aa7.82□□□□□ -1.16
GGA3-223ENST00000621870 CAMPP49913 170 aa7.82□□□□□ -1.16
GGA3-223ENST00000621870 HSPE1P61604 102 aaKnown RBP7.82□□□□□ -1.16
GGA3-223ENST00000621870 CLLU1Q5K131 121 aa7.82□□□□□ -1.16
GGA3-223ENST00000621870 ASPHD2Q6ICH7 369 aa7.82□□□□□ -1.16
GGA3-223ENST00000621870 GLRX5Q86SX6 157 aa7.82□□□□□ -1.16
GGA3-223ENST00000621870 OR11H7Q8NGC8 314 aa7.82□□□□□ -1.16
GGA3-223ENST00000621870 ZNF418Q8TF45 676 aaPredicted RBP7.82□□□□□ -1.16
GGA3-223ENST00000621870 OR4C12Q96R67 309 aa7.82□□□□□ -1.16
GGA3-223ENST00000621870 FBXL15Q9H469 300 aa7.82□□□□□ -1.16
GGA3-223ENST00000621870 PLSCR4Q9NRQ2 329 aa7.82□□□□□ -1.16
GGA3-223ENST00000621870 TMEM167BQ9NRX6 74 aa7.82□□□□□ -1.16
GGA3-223ENST00000621870 Q9UFV3 132 aa7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms