RNA–Protein interactions for RNA: ENST00000621562.1

U1.39-201, humanhuman

BASIC

Gene U1, Length 146 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U1.39-201ENST00000621562 LOXL3P58215 753 aa2.68□□□□□ -1.98
U1.39-201ENST00000621562 LINC00205P59089 165 aa2.68□□□□□ -1.98
U1.39-201ENST00000621562 RAB11AP62491 216 aa2.68□□□□□ -1.98
U1.39-201ENST00000621562 RPL23P62829 140 aaKnown RBP2.68□□□□□ -1.98
U1.39-201ENST00000621562 HBG1P69891 147 aa2.68□□□□□ -1.98
U1.39-201ENST00000621562 HBG2P69892 147 aa2.68□□□□□ -1.98
U1.39-201ENST00000621562 NKX6-1P78426 367 aaPredicted RBP2.68□□□□□ -1.98
U1.39-201ENST00000621562 HTD2P86397 168 aa2.68□□□□□ -1.98
U1.39-201ENST00000621562 MEF2BQ02080 365 aaPredicted RBP2.68□□□□□ -1.98
U1.39-201ENST00000621562 COL10A1Q03692 680 aa2.68□□□□□ -1.98
U1.39-201ENST00000621562 AESQ08117 197 aa2.68□□□□□ -1.98
U1.39-201ENST00000621562 ZNF816Q0VGE8 651 aaPredicted RBP2.68□□□□□ -1.98
U1.39-201ENST00000621562 FOXF2Q12947 444 aa2.68□□□□□ -1.98
U1.39-201ENST00000621562 ATP6V1FQ16864 119 aa2.68□□□□□ -1.98
U1.39-201ENST00000621562 ZNF674Q2M3X9 581 aa2.68□□□□□ -1.98
U1.39-201ENST00000621562 CR1LQ2VPA4 569 aa2.68□□□□□ -1.98
U1.39-201ENST00000621562 TMEM249Q2WGJ8 235 aa2.68□□□□□ -1.98
U1.39-201ENST00000621562 Q3ZCU0 254 aa2.68□□□□□ -1.98
U1.39-201ENST00000621562 OR2B11Q5JQS5 317 aa2.68□□□□□ -1.98
U1.39-201ENST00000621562 COA6Q5JTJ3 125 aaKnown RBP2.68□□□□□ -1.98
U1.39-201ENST00000621562 FAM209BQ5JX69 171 aa2.68□□□□□ -1.98
U1.39-201ENST00000621562 SPANXN5Q5MJ07 72 aa2.68□□□□□ -1.98
U1.39-201ENST00000621562 MBNL2Q5VZF2 373 aaKnown RBP2.68□□□□□ -1.98
U1.39-201ENST00000621562 NCR3LG1Q68D85 454 aa2.68□□□□□ -1.98
U1.39-201ENST00000621562 BTNL3Q6UXE8 466 aa2.68□□□□□ -1.98
U1.39-201ENST00000621562 ZNF66Q6ZN08 573 aa2.68□□□□□ -1.98
U1.39-201ENST00000621562 TCF23Q7RTU1 214 aa2.68□□□□□ -1.98
U1.39-201ENST00000621562 C16orf82Q7Z2V1 217 aa2.68□□□□□ -1.98
U1.39-201ENST00000621562 LURAP1LQ8IV03 231 aa2.68□□□□□ -1.98
U1.39-201ENST00000621562 C1orf87Q8N0U7 546 aa2.68□□□□□ -1.98
U1.39-201ENST00000621562 LILRB2Q8N423 598 aa2.68□□□□□ -1.98
U1.39-201ENST00000621562 PRR18Q8N4B5 295 aa2.68□□□□□ -1.98
U1.39-201ENST00000621562 ZNF808Q8N4W9 903 aaPredicted RBP2.68□□□□□ -1.98
U1.39-201ENST00000621562 DEFB123Q8N688 67 aa2.68□□□□□ -1.98
U1.39-201ENST00000621562 TPRX1Q8N7U7 411 aa2.68□□□□□ -1.98
U1.39-201ENST00000621562 FAM169BQ8N8A8 192 aa2.68□□□□□ -1.98
U1.39-201ENST00000621562 TMEM178AQ8NBL3 297 aa2.68□□□□□ -1.98
U1.39-201ENST00000621562 ZNF439Q8NDP4 499 aa2.68□□□□□ -1.98
U1.39-201ENST00000621562 RNASE11Q8TAA1 199 aaKnown RBP2.68□□□□□ -1.98
U1.39-201ENST00000621562 SNIP1Q8TAD8 396 aaKnown RBP2.68□□□□□ -1.98
U1.39-201ENST00000621562 MRGPRDQ8TDS7 321 aa2.68□□□□□ -1.98
U1.39-201ENST00000621562 DTD1Q8TEA8 209 aa2.68□□□□□ -1.98
U1.39-201ENST00000621562 FAM222BQ8WU58 562 aa2.68□□□□□ -1.98
U1.39-201ENST00000621562 FAM216AQ8WUB2 273 aa2.68□□□□□ -1.98
U1.39-201ENST00000621562 TCTEX1D2Q8WW35 142 aa2.68□□□□□ -1.98
U1.39-201ENST00000621562 DDB2Q92466 427 aa2.68□□□□□ -1.98
U1.39-201ENST00000621562 LHX4Q969G2 390 aa2.68□□□□□ -1.98
U1.39-201ENST00000621562 PINX1Q96BK5 328 aaKnown RBP2.68□□□□□ -1.98
U1.39-201ENST00000621562 FAM210BQ96KR6 192 aa2.68□□□□□ -1.98
U1.39-201ENST00000621562 LURAP1Q96LR2 239 aa2.68□□□□□ -1.98
U1.39-201ENST00000621562 FER1L6-AS2Q96M78 137 aa2.68□□□□□ -1.98
U1.39-201ENST00000621562 TAAR6Q96RI8 345 aa2.68□□□□□ -1.98
U1.39-201ENST00000621562 SMIM7Q9BQ49 75 aa2.68□□□□□ -1.98
U1.39-201ENST00000621562 NIPSNAP3BQ9BS92 247 aa2.68□□□□□ -1.98
U1.39-201ENST00000621562 GGACTQ9BVM4 153 aa2.68□□□□□ -1.98
U1.39-201ENST00000621562 QTRT1Q9BXR0 403 aaKnown RBP2.68□□□□□ -1.98
U1.39-201ENST00000621562 NPCDR1Q9BY65 106 aa2.68□□□□□ -1.98
U1.39-201ENST00000621562 CXXC4Q9H2H0 198 aa2.68□□□□□ -1.98
U1.39-201ENST00000621562 IFI27L2Q9H2X8 130 aa2.68□□□□□ -1.98
U1.39-201ENST00000621562 MANBALQ9NQG1 85 aa2.68□□□□□ -1.98
U1.39-201ENST00000621562 NIT2Q9NQR4 276 aa2.68□□□□□ -1.98
U1.39-201ENST00000621562 OR6C3Q9NZP0 311 aa2.68□□□□□ -1.98
U1.39-201ENST00000621562 CLN8Q9UBY8 286 aa2.68□□□□□ -1.98
U1.39-201ENST00000621562 MIOXQ9UGB7 285 aa2.68□□□□□ -1.98
U1.39-201ENST00000621562 NAT8Q9UHE5 227 aa2.68□□□□□ -1.98
U1.39-201ENST00000621562 VAX2Q9UIW0 290 aa2.68□□□□□ -1.98
U1.39-201ENST00000621562 TRAPPC2LQ9UL33 140 aa2.68□□□□□ -1.98
U1.39-201ENST00000621562 SLC25A15Q9Y619 301 aa2.68□□□□□ -1.98
U1.39-201ENST00000621562 DCHS1Q96JQ0 3298 aa2.68□□□□□ -1.98
U1.39-201ENST00000621562 TRBV20OR9-2A0A075B6H5 130 aa2.67□□□□□ -1.98
U1.39-201ENST00000621562 TRBV23-1A0A0A0MS06 115 aa2.67□□□□□ -1.98
U1.39-201ENST00000621562 TRAV3A0A0B4J244 114 aa2.67□□□□□ -1.98
U1.39-201ENST00000621562 TRGV8A0A0C4DH27 118 aa2.67□□□□□ -1.98
U1.39-201ENST00000621562 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP2.67□□□□□ -1.98
U1.39-201ENST00000621562 MBD3L4A6NDZ8 208 aaPredicted RBP2.67□□□□□ -1.98
U1.39-201ENST00000621562 MBD3L3A6NE82 208 aaPredicted RBP2.67□□□□□ -1.98
U1.39-201ENST00000621562 MBD3L5A6NJ08 208 aaPredicted RBP2.67□□□□□ -1.98
U1.39-201ENST00000621562 MARCH11A6NNE9 402 aa2.67□□□□□ -1.98
U1.39-201ENST00000621562 CLDN34H7C241 214 aa2.67□□□□□ -1.98
U1.39-201ENST00000621562 ITGB1BP1O14713 200 aa2.67□□□□□ -1.98
U1.39-201ENST00000621562 RRHO14718 337 aa2.67□□□□□ -1.98
U1.39-201ENST00000621562 TMPRSS2O15393 492 aa2.67□□□□□ -1.98
U1.39-201ENST00000621562 SLC31A2O15432 143 aa2.67□□□□□ -1.98
U1.39-201ENST00000621562 NKX2-8O15522 239 aa2.67□□□□□ -1.98
U1.39-201ENST00000621562 CYB5BO43169 146 aa2.67□□□□□ -1.98
U1.39-201ENST00000621562 TGOLN2O43493 480 aa2.67□□□□□ -1.98
U1.39-201ENST00000621562 FCN3O75636 299 aa2.67□□□□□ -1.98
U1.39-201ENST00000621562 CLDN1O95832 211 aa2.67□□□□□ -1.98
U1.39-201ENST00000621562 KRASP01116 189 aa2.67□□□□□ -1.98
U1.39-201ENST00000621562 LHBP01229 141 aa2.67□□□□□ -1.98
U1.39-201ENST00000621562 IFNA1P01562 189 aa2.67□□□□□ -1.98
U1.39-201ENST00000621562 OPN1MWP04001 364 aa2.67□□□□□ -1.98
U1.39-201ENST00000621562 TYMSP04818 313 aa2.67□□□□□ -1.98
U1.39-201ENST00000621562 S100A6P06703 90 aa2.67□□□□□ -1.98
U1.39-201ENST00000621562 GRPP07492 148 aa2.67□□□□□ -1.98
U1.39-201ENST00000621562 IL6RP08887 468 aaPredicted RBP2.67□□□□□ -1.98
U1.39-201ENST00000621562 ZNF806P0C7X5 589 aa2.67□□□□□ -1.98
U1.39-201ENST00000621562 OPN1MW2P0DN77 364 aa2.67□□□□□ -1.98
U1.39-201ENST00000621562 OPN1MW3P0DN78 364 aa2.67□□□□□ -1.98
U1.39-201ENST00000621562 SELLP14151 372 aa2.67□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms