RNA–Protein interactions for RNA: ENST00000620864.1

COLCA1-205, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best) BASIC

Gene COLCA1, Length 8,098 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-205ENST00000620864 ALKBH3Q96Q83 286 aaPredicted RBP6.23□□□□□ -1.41
COLCA1-205ENST00000620864 PDFQ9HBH1 243 aa6.23□□□□□ -1.41
COLCA1-205ENST00000620864 FGF22Q9HCT0 170 aa6.23□□□□□ -1.41
COLCA1-205ENST00000620864 A0A1W2PR80 420 aa6.23□□□□□ -1.41
COLCA1-205ENST00000620864 PGPEP1LA6NFU8 196 aa6.23□□□□□ -1.41
COLCA1-205ENST00000620864 HOXC4P09017 264 aaPredicted RBP6.23□□□□□ -1.41
COLCA1-205ENST00000620864 C8orf88P0DMB2 117 aa6.23□□□□□ -1.41
COLCA1-205ENST00000620864 PMVKQ15126 192 aa6.23□□□□□ -1.41
COLCA1-205ENST00000620864 RFLNAQ6ZTI6 216 aa6.23□□□□□ -1.41
COLCA1-205ENST00000620864 OR8B12Q8NGG6 310 aa6.23□□□□□ -1.41
COLCA1-205ENST00000620864 WDYHV1Q96HA8 205 aa6.23□□□□□ -1.41
COLCA1-205ENST00000620864 RABAC1Q9UI14 185 aa6.23□□□□□ -1.41
COLCA1-205ENST00000620864 MRM2Q9UI43 246 aaKnown RBP6.23□□□□□ -1.41
COLCA1-205ENST00000620864 INSIG2Q9Y5U4 225 aa6.23□□□□□ -1.41
COLCA1-205ENST00000620864 F11RQ9Y624 299 aaKnown RBP6.23□□□□□ -1.41
COLCA1-205ENST00000620864 SBK3P0C264 359 aa6.23□□□□□ -1.41
COLCA1-205ENST00000620864 B4GALNT1Q00973 533 aa6.23□□□□□ -1.41
COLCA1-205ENST00000620864 SRSF6Q13247 344 aaKnown RBP6.23□□□□□ -1.41
COLCA1-205ENST00000620864 TMEM249Q2WGJ8 235 aa6.23□□□□□ -1.41
COLCA1-205ENST00000620864 LYZL2Q7Z4W2 148 aa6.23□□□□□ -1.41
COLCA1-205ENST00000620864 PNPLA5Q7Z6Z6 429 aaPredicted RBP6.23□□□□□ -1.41
COLCA1-205ENST00000620864 GCSAMQ8N6F7 178 aa6.23□□□□□ -1.41
COLCA1-205ENST00000620864 CCL4L1Q8NHW4 92 aa6.23□□□□□ -1.41
COLCA1-205ENST00000620864 IMMP2LQ96T52 175 aa6.23□□□□□ -1.41
COLCA1-205ENST00000620864 ST20Q9HBF5 79 aa6.23□□□□□ -1.41
COLCA1-205ENST00000620864 ZNF831Q5JPB2 1677 aa6.23□□□□□ -1.41
COLCA1-205ENST00000620864 RGPD4Q7Z3J3 1758 aa6.23□□□□□ -1.41
COLCA1-205ENST00000620864 DOCK1Q14185 1865 aa6.23□□□□□ -1.41
COLCA1-205ENST00000620864 ABCA4P78363 2273 aa6.22□□□□□ -1.41
COLCA1-205ENST00000620864 MAST2Q6P0Q8 1798 aa6.22□□□□□ -1.41
COLCA1-205ENST00000620864 GVQW1Q8N7I0 195 aa6.22□□□□□ -1.41
COLCA1-205ENST00000620864 CNRIP1Q96F85 164 aaPredicted RBP6.22□□□□□ -1.41
COLCA1-205ENST00000620864 SMIM14Q96QK8 99 aa6.22□□□□□ -1.41
COLCA1-205ENST00000620864 KLKB1P03952 638 aa6.22□□□□□ -1.41
COLCA1-205ENST00000620864 LGALS1P09382 135 aaKnown RBP6.22□□□□□ -1.41
COLCA1-205ENST00000620864 ZNF32P17041 273 aa6.22□□□□□ -1.41
COLCA1-205ENST00000620864 CDAP32320 146 aa6.22□□□□□ -1.41
COLCA1-205ENST00000620864 IL11RAQ14626 422 aa6.22□□□□□ -1.41
COLCA1-205ENST00000620864 ATXN8Q156A1 80 aa6.22□□□□□ -1.41
COLCA1-205ENST00000620864 CSRP2Q16527 193 aa6.22□□□□□ -1.41
COLCA1-205ENST00000620864 SNAI3Q3KNW1 292 aa6.22□□□□□ -1.41
COLCA1-205ENST00000620864 CCSMST1Q4G0I0 132 aa6.22□□□□□ -1.41
COLCA1-205ENST00000620864 WFDC3Q8IUB2 231 aa6.22□□□□□ -1.41
COLCA1-205ENST00000620864 MS4A6AQ9H2W1 248 aa6.22□□□□□ -1.41
COLCA1-205ENST00000620864 SMPXQ9UHP9 88 aa6.22□□□□□ -1.41
COLCA1-205ENST00000620864 NR2C2APQ86WQ0 139 aa6.22□□□□□ -1.41
COLCA1-205ENST00000620864 C17orf47Q8NEP4 570 aa6.22□□□□□ -1.41
COLCA1-205ENST00000620864 OR9G4Q8NGQ1 327 aa6.22□□□□□ -1.41
COLCA1-205ENST00000620864 C1orf43Q9BWL3 253 aa6.22□□□□□ -1.41
COLCA1-205ENST00000620864 ABCA7Q8IZY2 2146 aa6.22□□□□□ -1.41
COLCA1-205ENST00000620864 HLA-DQB1P01920 261 aa6.22□□□□□ -1.41
COLCA1-205ENST00000620864 ERGP11308 486 aa6.22□□□□□ -1.41
COLCA1-205ENST00000620864 CNTFRP26992 372 aa6.22□□□□□ -1.41
COLCA1-205ENST00000620864 SSBP2P81877 361 aaPredicted RBP6.22□□□□□ -1.41
COLCA1-205ENST00000620864 TMEM95Q3KNT9 176 aa6.22□□□□□ -1.41
COLCA1-205ENST00000620864 ZNF645Q8N7E2 425 aa6.22□□□□□ -1.41
COLCA1-205ENST00000620864 SMIM8Q96KF7 97 aa6.22□□□□□ -1.41
COLCA1-205ENST00000620864 IL36BQ9NZH7 164 aa6.22□□□□□ -1.41
COLCA1-205ENST00000620864 TBC1D29Q9UFV1 150 aa6.22□□□□□ -1.41
COLCA1-205ENST00000620864 BCORQ6W2J9 1755 aa6.22□□□□□ -1.41
COLCA1-205ENST00000620864 A0A0U1RQV5 110 aa6.22□□□□□ -1.41
COLCA1-205ENST00000620864 DEFB108AA8MXU0 73 aa6.22□□□□□ -1.41
COLCA1-205ENST00000620864 SRD5A1P18405 259 aa6.22□□□□□ -1.41
COLCA1-205ENST00000620864 FCGR2BP31994 310 aaPredicted RBP6.22□□□□□ -1.41
COLCA1-205ENST00000620864 TM4SF20Q53R12 229 aa6.22□□□□□ -1.41
COLCA1-205ENST00000620864 TMEM252Q8N6L7 170 aa6.22□□□□□ -1.41
COLCA1-205ENST00000620864 PLPPR2Q96GM1 343 aa6.22□□□□□ -1.41
COLCA1-205ENST00000620864 C16orf92Q96LL3 132 aa6.22□□□□□ -1.41
COLCA1-205ENST00000620864 ZNF48Q96MX3 618 aaPredicted RBP6.22□□□□□ -1.41
COLCA1-205ENST00000620864 LRRC61Q9BV99 259 aa6.22□□□□□ -1.41
COLCA1-205ENST00000620864 PRDM14Q9GZV8 571 aa6.22□□□□□ -1.41
COLCA1-205ENST00000620864 MED19A0JLT2 244 aaPredicted RBP6.22□□□□□ -1.41
COLCA1-205ENST00000620864 EGR1P18146 543 aa6.22□□□□□ -1.41
COLCA1-205ENST00000620864 RAE1P78406 368 aaKnown RBP6.22□□□□□ -1.41
COLCA1-205ENST00000620864 ZNF774Q6NX45 483 aa6.22□□□□□ -1.41
COLCA1-205ENST00000620864 CCL28Q9NRJ3 127 aa6.22□□□□□ -1.41
COLCA1-205ENST00000620864 USP54Q70EL1 1684 aa6.22□□□□□ -1.41
COLCA1-205ENST00000620864 ARID1AO14497 2285 aa6.22□□□□□ -1.41
COLCA1-205ENST00000620864 K7N7A8 449 aa6.21□□□□□ -1.41
COLCA1-205ENST00000620864 RRHO14718 337 aa6.21□□□□□ -1.41
COLCA1-205ENST00000620864 GDF9O60383 454 aa6.21□□□□□ -1.41
COLCA1-205ENST00000620864 HSD52Q0P140 79 aa6.21□□□□□ -1.41
COLCA1-205ENST00000620864 LAMTOR1Q6IAA8 161 aa6.21□□□□□ -1.41
COLCA1-205ENST00000620864 PAQR9Q6ZVX9 377 aa6.21□□□□□ -1.41
COLCA1-205ENST00000620864 A6NNC1 897 aa6.21□□□□□ -1.41
COLCA1-205ENST00000620864 PNLIPP16233 465 aa6.21□□□□□ -1.41
COLCA1-205ENST00000620864 GAGE13Q4V321 117 aa6.21□□□□□ -1.41
COLCA1-205ENST00000620864 OLIG3Q7RTU3 272 aa6.21□□□□□ -1.41
COLCA1-205ENST00000620864 LOXL4Q96JB6 756 aa6.21□□□□□ -1.41
COLCA1-205ENST00000620864 PGLYRP4Q96LB8 373 aa6.21□□□□□ -1.41
COLCA1-205ENST00000620864 TLNRD1Q9H1K6 362 aa6.21□□□□□ -1.41
COLCA1-205ENST00000620864 TBL2Q9Y4P3 447 aaKnown RBP6.21□□□□□ -1.41
COLCA1-205ENST00000620864 PRR19A6NJB7 356 aa6.21□□□□□ -1.42
COLCA1-205ENST00000620864 NKX2-8O15522 239 aa6.21□□□□□ -1.42
COLCA1-205ENST00000620864 CX3CL1P78423 397 aa6.21□□□□□ -1.42
COLCA1-205ENST00000620864 ADAD2Q8NCV1 583 aaKnown RBP6.21□□□□□ -1.42
COLCA1-205ENST00000620864 PPP1R3EQ9H7J1 279 aa6.21□□□□□ -1.42
COLCA1-205ENST00000620864 RNF7Q9UBF6 113 aa6.21□□□□□ -1.42
COLCA1-205ENST00000620864 C5orf67F2Z3F1 127 aa6.21□□□□□ -1.42
COLCA1-205ENST00000620864 NPFFO15130 113 aa6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms