RNA–Protein interactions for RNA: ENST00000620787.4

PDLIM3-212, Transcript of PDZ and LIM domain 3, humanhuman

TSL 4 BASIC

Gene PDLIM3, Length 2,352 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-212ENST00000620787 BCL2L2Q92843 193 aaPredicted RBP16.36■□□□□ 0.21
PDLIM3-212ENST00000620787 TTTY12Q9BZ98 90 aa16.36■□□□□ 0.21
PDLIM3-212ENST00000620787 C12orf49Q9H741 205 aa16.36■□□□□ 0.21
PDLIM3-212ENST00000620787 HBZP02008 142 aa16.35■□□□□ 0.21
PDLIM3-212ENST00000620787 DUSP3P51452 185 aaPredicted RBP16.35■□□□□ 0.21
PDLIM3-212ENST00000620787 TCF23Q7RTU1 214 aa16.35■□□□□ 0.21
PDLIM3-212ENST00000620787 VASH2Q86V25 355 aa16.35■□□□□ 0.21
PDLIM3-212ENST00000620787 SFRP2Q96HF1 295 aa16.35■□□□□ 0.21
PDLIM3-212ENST00000620787 TRBV20OR9-2A0A075B6H5 130 aa16.35■□□□□ 0.21
PDLIM3-212ENST00000620787 PATE3B3GLJ2 98 aa16.35■□□□□ 0.21
PDLIM3-212ENST00000620787 F6UZH7 168 aa16.35■□□□□ 0.21
PDLIM3-212ENST00000620787 M0R143 59 aa16.35■□□□□ 0.21
PDLIM3-212ENST00000620787 RBMXL2O75526 392 aaKnown RBP16.35■□□□□ 0.21
PDLIM3-212ENST00000620787 WISP2O76076 250 aa16.35■□□□□ 0.21
PDLIM3-212ENST00000620787 SELEP16581 610 aa16.35■□□□□ 0.21
PDLIM3-212ENST00000620787 SOX8P57073 446 aa16.35■□□□□ 0.21
PDLIM3-212ENST00000620787 ZXDAP98168 799 aa16.35■□□□□ 0.21
PDLIM3-212ENST00000620787 TRIP6Q15654 476 aaKnown RBP16.35■□□□□ 0.21
PDLIM3-212ENST00000620787 ALKBH6Q3KRA9 238 aa16.35■□□□□ 0.21
PDLIM3-212ENST00000620787 ZNF766Q5HY98 468 aa16.35■□□□□ 0.21
PDLIM3-212ENST00000620787 SGMS2Q8NHU3 365 aa16.35■□□□□ 0.21
PDLIM3-212ENST00000620787 MS4A10Q96PG2 267 aa16.35■□□□□ 0.21
PDLIM3-212ENST00000620787 LINC00473A8K010 186 aa16.34■□□□□ 0.21
PDLIM3-212ENST00000620787 RAB4AP20338 218 aa16.34■□□□□ 0.21
PDLIM3-212ENST00000620787 OR10J1P30954 320 aa16.34■□□□□ 0.21
PDLIM3-212ENST00000620787 ADMP35318 185 aa16.34■□□□□ 0.21
PDLIM3-212ENST00000620787 LINC00205P59089 165 aa16.34■□□□□ 0.21
PDLIM3-212ENST00000620787 DCAF12Q5T6F0 453 aa16.34■□□□□ 0.21
PDLIM3-212ENST00000620787 TAAR6Q96RI8 345 aa16.34■□□□□ 0.21
PDLIM3-212ENST00000620787 OR2J1Q9GZK6 312 aa16.34■□□□□ 0.21
PDLIM3-212ENST00000620787 SIT1Q9Y3P8 196 aa16.34■□□□□ 0.21
PDLIM3-212ENST00000620787 LOXL2Q9Y4K0 774 aa16.34■□□□□ 0.21
PDLIM3-212ENST00000620787 OOEPA6NGQ2 149 aa16.34■□□□□ 0.21
PDLIM3-212ENST00000620787 CD1BP29016 333 aa16.34■□□□□ 0.21
PDLIM3-212ENST00000620787 TDGF1P3P51864 188 aa16.34■□□□□ 0.21
PDLIM3-212ENST00000620787 EDDM3BP56851 147 aa16.34■□□□□ 0.21
PDLIM3-212ENST00000620787 FIP1L1Q6UN15 594 aaKnown RBP16.34■□□□□ 0.21
PDLIM3-212ENST00000620787 C6orf15Q6UXA7 325 aaPredicted RBP16.34■□□□□ 0.21
PDLIM3-212ENST00000620787 MCEMP1Q8IX19 187 aa16.34■□□□□ 0.21
PDLIM3-212ENST00000620787 QTRT1Q9BXR0 403 aaKnown RBP16.34■□□□□ 0.21
PDLIM3-212ENST00000620787 HES4Q9HCC6 221 aa16.34■□□□□ 0.21
PDLIM3-212ENST00000620787 SMPD2O60906 423 aa16.33■□□□□ 0.2
PDLIM3-212ENST00000620787 GRPP07492 148 aa16.33■□□□□ 0.2
PDLIM3-212ENST00000620787 CELA3BP08861 270 aa16.33■□□□□ 0.2
PDLIM3-212ENST00000620787 TBC1D28Q2M2D7 210 aa16.33■□□□□ 0.2
PDLIM3-212ENST00000620787 SLC35E4Q6ICL7 350 aa16.33■□□□□ 0.2
PDLIM3-212ENST00000620787 TDHQ8IZJ6 230 aa16.33■□□□□ 0.2
PDLIM3-212ENST00000620787 TMEM251Q8N6I4 163 aa16.33■□□□□ 0.2
PDLIM3-212ENST00000620787 TCTEX1D1Q8N7M0 179 aa16.33■□□□□ 0.2
PDLIM3-212ENST00000620787 HCFC1P51610 2035 aa16.33■□□□□ 0.2
PDLIM3-212ENST00000620787 CASP6P55212 293 aa16.33■□□□□ 0.2
PDLIM3-212ENST00000620787 YPEL3P61236 119 aaPredicted RBP16.33■□□□□ 0.2
PDLIM3-212ENST00000620787 AESQ08117 197 aa16.33■□□□□ 0.2
PDLIM3-212ENST00000620787 NANOS1Q8WY41 292 aaKnown RBP16.33■□□□□ 0.2
PDLIM3-212ENST00000620787 COQ2Q96H96 371 aa16.33■□□□□ 0.2
PDLIM3-212ENST00000620787 CACNA1DQ01668 2161 aa16.32■□□□□ 0.2
PDLIM3-212ENST00000620787 MDFIC2A0A1B0GVS7 189 aa16.32■□□□□ 0.2
PDLIM3-212ENST00000620787 UBE2NP61088 152 aaKnown RBP16.32■□□□□ 0.2
PDLIM3-212ENST00000620787 OR1C1Q15619 314 aa16.32■□□□□ 0.2
PDLIM3-212ENST00000620787 ZCCHC14Q8WYQ9 949 aaKnown RBP16.32■□□□□ 0.2
PDLIM3-212ENST00000620787 NINJ1Q92982 152 aa16.32■□□□□ 0.2
PDLIM3-212ENST00000620787 PATZ1Q9HBE1 687 aaKnown RBP16.32■□□□□ 0.2
PDLIM3-212ENST00000620787 A0A1W2PPV4 95 aa16.31■□□□□ 0.2
PDLIM3-212ENST00000620787 MARCH11A6NNE9 402 aa16.31■□□□□ 0.2
PDLIM3-212ENST00000620787 WNT9BO14905 357 aa16.31■□□□□ 0.2
PDLIM3-212ENST00000620787 G0S2P27469 103 aa16.31■□□□□ 0.2
PDLIM3-212ENST00000620787 TBX15Q96SF7 602 aa16.31■□□□□ 0.2
PDLIM3-212ENST00000620787 TP53TG3Q9ULZ0 132 aa16.31■□□□□ 0.2
PDLIM3-212ENST00000620787 YPEL1O60688 119 aa16.31■□□□□ 0.2
PDLIM3-212ENST00000620787 OR9G9P0C7N8 305 aa16.31■□□□□ 0.2
PDLIM3-212ENST00000620787 HOXA4Q00056 320 aaPredicted RBP16.31■□□□□ 0.2
PDLIM3-212ENST00000620787 Q6ZR03 302 aa16.31■□□□□ 0.2
PDLIM3-212ENST00000620787 CMTM2Q8TAZ6 248 aa16.31■□□□□ 0.2
PDLIM3-212ENST00000620787 MRGPRDQ8TDS7 321 aa16.31■□□□□ 0.2
PDLIM3-212ENST00000620787 YPEL2Q96QA6 119 aa16.31■□□□□ 0.2
PDLIM3-212ENST00000620787 FRYQ5TBA9 3013 aa16.31■□□□□ 0.2
PDLIM3-212ENST00000620787 GRIFINA4D1Z8 144 aa16.3■□□□□ 0.2
PDLIM3-212ENST00000620787 ZNF705FA8MVS1 300 aaPredicted RBP16.3■□□□□ 0.2
PDLIM3-212ENST00000620787 J3QW42 95 aa16.3■□□□□ 0.2
PDLIM3-212ENST00000620787 ZNF705DP0CH99 300 aaPredicted RBP16.3■□□□□ 0.2
PDLIM3-212ENST00000620787 ZNF705BP0CI00 300 aaPredicted RBP16.3■□□□□ 0.2
PDLIM3-212ENST00000620787 ARL14EPLP0DKL9 152 aa16.3■□□□□ 0.2
PDLIM3-212ENST00000620787 SELENOTP62341 195 aa16.3■□□□□ 0.2
PDLIM3-212ENST00000620787 ABHD17BQ5VST6 288 aa16.3■□□□□ 0.2
PDLIM3-212ENST00000620787 SCO2A0A1W2PP80 73 aa16.3■□□□□ 0.2
PDLIM3-212ENST00000620787 TFF1P04155 84 aa16.3■□□□□ 0.2
PDLIM3-212ENST00000620787 TIMP3P35625 211 aa16.3■□□□□ 0.2
PDLIM3-212ENST00000620787 LINC00310P59036 64 aa16.3■□□□□ 0.2
PDLIM3-212ENST00000620787 GABRA6Q16445 453 aa16.3■□□□□ 0.2
PDLIM3-212ENST00000620787 FBXW9Q5XUX1 488 aa16.3■□□□□ 0.2
PDLIM3-212ENST00000620787 MAFAQ8NHW3 353 aaPredicted RBP16.3■□□□□ 0.2
PDLIM3-212ENST00000620787 TMEM68Q96MH6 324 aa16.3■□□□□ 0.2
PDLIM3-212ENST00000620787 STAG3L2P0CL84 134 aa16.29■□□□□ 0.2
PDLIM3-212ENST00000620787 STAG3L3P0CL85 134 aa16.29■□□□□ 0.2
PDLIM3-212ENST00000620787 KITLGP21583 273 aa16.29■□□□□ 0.2
PDLIM3-212ENST00000620787 OPRK1P41145 380 aa16.29■□□□□ 0.2
PDLIM3-212ENST00000620787 Q6ZWC4 215 aa16.29■□□□□ 0.2
PDLIM3-212ENST00000620787 WDR31Q8NA23 367 aa16.29■□□□□ 0.2
PDLIM3-212ENST00000620787 SLC25A40Q8TBP6 338 aa16.29■□□□□ 0.2
PDLIM3-212ENST00000620787 R3HDM4Q96D70 268 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms