RNA–Protein interactions for RNA: ENST00000620676.4

VPS13D-214, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13D, Length 16,320 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-214ENST00000620676 LYG1Q8N1E2 194 aa4.32□□□□□ -1.72
VPS13D-214ENST00000620676 ABHD12Q8N2K0 398 aa4.32□□□□□ -1.72
VPS13D-214ENST00000620676 NPIPB3Q92617 1050 aa4.32□□□□□ -1.72
VPS13D-214ENST00000620676 SPAG8Q99932 426 aaPredicted RBP4.32□□□□□ -1.72
VPS13D-214ENST00000620676 GPR35Q9HC97 309 aa4.32□□□□□ -1.72
VPS13D-214ENST00000620676 OOEPA6NGQ2 149 aa4.32□□□□□ -1.72
VPS13D-214ENST00000620676 ZNF785A8K8V0 405 aa4.32□□□□□ -1.72
VPS13D-214ENST00000620676 IL36BQ9NZH7 164 aa4.32□□□□□ -1.72
VPS13D-214ENST00000620676 TRAV5A0A0B4J249 113 aa4.32□□□□□ -1.72
VPS13D-214ENST00000620676 B5MCH6 92 aa4.32□□□□□ -1.72
VPS13D-214ENST00000620676 FAM110CQ1W6H9 321 aa4.32□□□□□ -1.72
VPS13D-214ENST00000620676 GAGE13Q4V321 117 aa4.32□□□□□ -1.72
VPS13D-214ENST00000620676 CD207Q9UJ71 328 aa4.32□□□□□ -1.72
VPS13D-214ENST00000620676 CEACAM5P06731 702 aa4.32□□□□□ -1.72
VPS13D-214ENST00000620676 FTH1P19P0C7X4 201 aa4.32□□□□□ -1.72
VPS13D-214ENST00000620676 VDAC1P21796 283 aa4.32□□□□□ -1.72
VPS13D-214ENST00000620676 SCN7AQ01118 1682 aa4.32□□□□□ -1.72
VPS13D-214ENST00000620676 ZNF735P0CB33 412 aa4.32□□□□□ -1.72
VPS13D-214ENST00000620676 MBNL2Q5VZF2 373 aaKnown RBP4.32□□□□□ -1.72
VPS13D-214ENST00000620676 ZNF385AQ96PM9 386 aaKnown RBP4.32□□□□□ -1.72
VPS13D-214ENST00000620676 USP54Q70EL1 1684 aa4.32□□□□□ -1.72
VPS13D-214ENST00000620676 TRBV20-1A0A075B6N2 111 aa4.32□□□□□ -1.72
VPS13D-214ENST00000620676 C3orf79P0CE67 100 aa4.32□□□□□ -1.72
VPS13D-214ENST00000620676 SOX8P57073 446 aa4.32□□□□□ -1.72
VPS13D-214ENST00000620676 PRICKLE4Q2TBC4 344 aa4.32□□□□□ -1.72
VPS13D-214ENST00000620676 COMMD5Q9GZQ3 224 aa4.32□□□□□ -1.72
VPS13D-214ENST00000620676 TMEM74BQ9NUR3 256 aa4.32□□□□□ -1.72
VPS13D-214ENST00000620676 KBTBD11-OT1A0A1B0GTJ5 212 aa4.32□□□□□ -1.72
VPS13D-214ENST00000620676 DEFB103AP81534 67 aa4.32□□□□□ -1.72
VPS13D-214ENST00000620676 ROM1Q03395 351 aa4.32□□□□□ -1.72
VPS13D-214ENST00000620676 PRB3Q04118 309 aaPredicted RBP4.32□□□□□ -1.72
VPS13D-214ENST00000620676 TMEM230Q96A57 120 aa4.32□□□□□ -1.72
VPS13D-214ENST00000620676 ABCA4P78363 2273 aa4.32□□□□□ -1.72
VPS13D-214ENST00000620676 CACNA1SQ13698 1873 aa4.32□□□□□ -1.72
VPS13D-214ENST00000620676 A0A0G2JMM0 328 aa4.32□□□□□ -1.72
VPS13D-214ENST00000620676 A0A1W2PPB8 328 aa4.32□□□□□ -1.72
VPS13D-214ENST00000620676 KIR3DP1A8MWS1 328 aa4.32□□□□□ -1.72
VPS13D-214ENST00000620676 PRSS2P07478 247 aa4.32□□□□□ -1.72
VPS13D-214ENST00000620676 PSG6Q00889 435 aa4.32□□□□□ -1.72
VPS13D-214ENST00000620676 CDX2Q99626 313 aaPredicted RBP4.32□□□□□ -1.72
VPS13D-214ENST00000620676 NCOR1P1Q9H4R4 102 aa4.32□□□□□ -1.72
VPS13D-214ENST00000620676 A0A0A6YYD4 124 aa4.32□□□□□ -1.72
VPS13D-214ENST00000620676 TRAV8-2A0A0B4J237 113 aa4.32□□□□□ -1.72
VPS13D-214ENST00000620676 J3QW42 95 aa4.32□□□□□ -1.72
VPS13D-214ENST00000620676 ZNF324BQ6AW86 544 aaPredicted RBP4.32□□□□□ -1.72
VPS13D-214ENST00000620676 ABHD14BQ96IU4 210 aa4.32□□□□□ -1.72
VPS13D-214ENST00000620676 TOX2Q96NM4 488 aa4.32□□□□□ -1.72
VPS13D-214ENST00000620676 SCRT1Q9BWW7 348 aa4.32□□□□□ -1.72
VPS13D-214ENST00000620676 KIR3DX1Q9H7L2 352 aa4.32□□□□□ -1.72
VPS13D-214ENST00000620676 PRRT4C9JH25 899 aa4.32□□□□□ -1.72
VPS13D-214ENST00000620676 GALR2O43603 387 aaPredicted RBP4.32□□□□□ -1.72
VPS13D-214ENST00000620676 GCHFRP30047 84 aa4.32□□□□□ -1.72
VPS13D-214ENST00000620676 NAPSAO96009 420 aa4.32□□□□□ -1.72
VPS13D-214ENST00000620676 TMEM164Q5U3C3 297 aa4.32□□□□□ -1.72
VPS13D-214ENST00000620676 SRSF12Q8WXF0 261 aaKnown RBP4.32□□□□□ -1.72
VPS13D-214ENST00000620676 RNF122Q9H9V4 155 aa4.32□□□□□ -1.72
VPS13D-214ENST00000620676 HCFC2Q9Y5Z7 792 aa4.32□□□□□ -1.72
VPS13D-214ENST00000620676 DHRS3O75911 302 aa4.31□□□□□ -1.72
VPS13D-214ENST00000620676 OR2K2Q8NGT1 345 aa4.31□□□□□ -1.72
VPS13D-214ENST00000620676 NGFP01138 241 aa4.31□□□□□ -1.72
VPS13D-214ENST00000620676 DRD1P21728 446 aa4.31□□□□□ -1.72
VPS13D-214ENST00000620676 COL8A1P27658 744 aa4.31□□□□□ -1.72
VPS13D-214ENST00000620676 TSPAN7P41732 249 aa4.31□□□□□ -1.72
VPS13D-214ENST00000620676 SHISA5Q8N114 240 aa4.31□□□□□ -1.72
VPS13D-214ENST00000620676 ZNF324O75467 553 aaPredicted RBP4.31□□□□□ -1.72
VPS13D-214ENST00000620676 SSTR5P35346 364 aa4.31□□□□□ -1.72
VPS13D-214ENST00000620676 GFERP55789 205 aa4.31□□□□□ -1.72
VPS13D-214ENST00000620676 GUSBP1Q15486 140 aa4.31□□□□□ -1.72
VPS13D-214ENST00000620676 DDX60Q8IY21 1712 aaKnown RBP4.31□□□□□ -1.72
VPS13D-214ENST00000620676 DUX1O43812 170 aa4.31□□□□□ -1.72
VPS13D-214ENST00000620676 CXCL13O43927 109 aa4.31□□□□□ -1.72
VPS13D-214ENST00000620676 TFF1P04155 84 aa4.31□□□□□ -1.72
VPS13D-214ENST00000620676 IL4P05112 153 aa4.31□□□□□ -1.72
VPS13D-214ENST00000620676 GAGE1Q13065 139 aa4.31□□□□□ -1.72
VPS13D-214ENST00000620676 ZIC1Q15915 447 aa4.31□□□□□ -1.72
VPS13D-214ENST00000620676 IBA57Q5T440 356 aaKnown RBP4.31□□□□□ -1.72
VPS13D-214ENST00000620676 VN1R4Q7Z5H5 301 aa4.31□□□□□ -1.72
VPS13D-214ENST00000620676 TSKUQ8WUA8 353 aa4.31□□□□□ -1.72
VPS13D-214ENST00000620676 POM121L2Q96KW2 1035 aa4.31□□□□□ -1.72
VPS13D-214ENST00000620676 PLSCR2Q9NRY7 297 aa4.31□□□□□ -1.72
VPS13D-214ENST00000620676 IGKV1-8A0A0C4DH67 115 aa4.31□□□□□ -1.72
VPS13D-214ENST00000620676 J3QR06 171 aa4.31□□□□□ -1.72
VPS13D-214ENST00000620676 GAB4Q2WGN9 574 aa4.31□□□□□ -1.72
VPS13D-214ENST00000620676 OR4A5Q8NH83 315 aa4.31□□□□□ -1.72
VPS13D-214ENST00000620676 CLEC1BQ9P126 229 aa4.31□□□□□ -1.72
VPS13D-214ENST00000620676 GZMHP20718 246 aa4.31□□□□□ -1.72
VPS13D-214ENST00000620676 CLDN18P56856 261 aa4.31□□□□□ -1.72
VPS13D-214ENST00000620676 C9orf50Q5SZB4 431 aa4.31□□□□□ -1.72
VPS13D-214ENST00000620676 LINC01465Q8N7H1 131 aa4.31□□□□□ -1.72
VPS13D-214ENST00000620676 OR4D5Q8NGN0 318 aa4.31□□□□□ -1.72
VPS13D-214ENST00000620676 S1PR2O95136 353 aa4.31□□□□□ -1.72
VPS13D-214ENST00000620676 APOHP02749 345 aaPredicted RBP4.31□□□□□ -1.72
VPS13D-214ENST00000620676 SLC23A3Q6PIS1 610 aa4.31□□□□□ -1.72
VPS13D-214ENST00000620676 GTSCR1Q86UQ5 136 aa4.31□□□□□ -1.72
VPS13D-214ENST00000620676 TPRX1Q8N7U7 411 aa4.31□□□□□ -1.72
VPS13D-214ENST00000620676 OR5AN1Q8NGI8 311 aa4.31□□□□□ -1.72
VPS13D-214ENST00000620676 PPP1R35Q8TAP8 253 aa4.31□□□□□ -1.72
VPS13D-214ENST00000620676 C18orf12Q96KH6 178 aa4.31□□□□□ -1.72
VPS13D-214ENST00000620676 RAMP3O60896 148 aa4.31□□□□□ -1.72
VPS13D-214ENST00000620676 GATA2P23769 480 aaPredicted RBP4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms