RNA–Protein interactions for RNA: ENST00000618395.4

COL5A1-208, Transcript of collagen type V alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL5A1, Length 8,437 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-208ENST00000618395 S100A7L2Q5SY68 101 aa13.07□□□□□ -0.32
COL5A1-208ENST00000618395 OR9G4Q8NGQ1 327 aa13.07□□□□□ -0.32
COL5A1-208ENST00000618395 PCOLCE2Q9UKZ9 415 aa13.07□□□□□ -0.32
COL5A1-208ENST00000618395 GGTLC3B5MD39 225 aa13.07□□□□□ -0.32
COL5A1-208ENST00000618395 CRYBB3P26998 211 aa13.07□□□□□ -0.32
COL5A1-208ENST00000618395 HSPE1P61604 102 aaKnown RBP13.07□□□□□ -0.32
COL5A1-208ENST00000618395 GPR82Q96P67 336 aa13.07□□□□□ -0.32
COL5A1-208ENST00000618395 ALKBH6Q3KRA9 238 aa13.06□□□□□ -0.32
COL5A1-208ENST00000618395 RFLNAQ6ZTI6 216 aa13.06□□□□□ -0.32
COL5A1-208ENST00000618395 TMEM91Q6ZNR0 172 aa13.06□□□□□ -0.32
COL5A1-208ENST00000618395 LINC00696Q6ZRV3 163 aa13.06□□□□□ -0.32
COL5A1-208ENST00000618395 RTN4RL2Q86UN3 420 aa13.06□□□□□ -0.32
COL5A1-208ENST00000618395 OR4D11Q8NGI4 311 aa13.06□□□□□ -0.32
COL5A1-208ENST00000618395 OR10J6PQ8NGY7 276 aa13.06□□□□□ -0.32
COL5A1-208ENST00000618395 PHLDA1Q8WV24 401 aaPredicted RBP13.06□□□□□ -0.32
COL5A1-208ENST00000618395 IMMP2LQ96T52 175 aa13.06□□□□□ -0.32
COL5A1-208ENST00000618395 ITGB1BP1O14713 200 aa13.06□□□□□ -0.32
COL5A1-208ENST00000618395 FOXA3P55318 350 aaPredicted RBP13.06□□□□□ -0.32
COL5A1-208ENST00000618395 TWSG1Q9GZX9 223 aa13.06□□□□□ -0.32
COL5A1-208ENST00000618395 FGF21Q9NSA1 209 aa13.06□□□□□ -0.32
COL5A1-208ENST00000618395 DLEC1Q9Y238 1755 aa13.06□□□□□ -0.32
COL5A1-208ENST00000618395 NCKAP5O14513 1909 aa13.06□□□□□ -0.32
COL5A1-208ENST00000618395 ATXN7O15265 892 aaPredicted RBP13.06□□□□□ -0.32
COL5A1-208ENST00000618395 SRD5A2P31213 254 aa13.06□□□□□ -0.32
COL5A1-208ENST00000618395 LOXL4Q96JB6 756 aa13.06□□□□□ -0.32
COL5A1-208ENST00000618395 HARBI1Q96MB7 349 aa13.06□□□□□ -0.32
COL5A1-208ENST00000618395 IGKV6-21A0A0C4DH24 114 aa13.06□□□□□ -0.32
COL5A1-208ENST00000618395 PLNP26678 52 aa13.06□□□□□ -0.32
COL5A1-208ENST00000618395 C2orf68Q2NKX9 166 aa13.06□□□□□ -0.32
COL5A1-208ENST00000618395 SLC25A15Q9Y619 301 aa13.06□□□□□ -0.32
COL5A1-208ENST00000618395 GREB1Q4ZG55 1949 aa13.06□□□□□ -0.32
COL5A1-208ENST00000618395 PSG6Q00889 435 aa13.06□□□□□ -0.32
COL5A1-208ENST00000618395 ANKRD33Q7Z3H0 272 aa13.06□□□□□ -0.32
COL5A1-208ENST00000618395 BAHD1Q8TBE0 780 aaPredicted RBP13.06□□□□□ -0.32
COL5A1-208ENST00000618395 TRACP01848 142 aa13.06□□□□□ -0.32
COL5A1-208ENST00000618395 RPS19BP1Q86WX3 136 aaKnown RBP13.05□□□□□ -0.32
COL5A1-208ENST00000618395 NABP2Q9BQ15 211 aa13.05□□□□□ -0.32
COL5A1-208ENST00000618395 GFRA1P56159 465 aa13.05□□□□□ -0.32
COL5A1-208ENST00000618395 SCGB3A1Q96QR1 104 aa13.05□□□□□ -0.32
COL5A1-208ENST00000618395 IGLV3-10A0A075B6K4 115 aa13.05□□□□□ -0.32
COL5A1-208ENST00000618395 H3BRM9 83 aa13.05□□□□□ -0.32
COL5A1-208ENST00000618395 RTP5Q14D33 572 aa13.05□□□□□ -0.32
COL5A1-208ENST00000618395 SMIM8Q96KF7 97 aa13.05□□□□□ -0.32
COL5A1-208ENST00000618395 ZNF714Q96N38 554 aa13.05□□□□□ -0.32
COL5A1-208ENST00000618395 RAMP1O60894 148 aa13.05□□□□□ -0.32
COL5A1-208ENST00000618395 MRPS11P82912 194 aaKnown RBP13.05□□□□□ -0.32
COL5A1-208ENST00000618395 TBR1Q16650 682 aa13.05□□□□□ -0.32
COL5A1-208ENST00000618395 A0A1B0GUT8 65 aa13.05□□□□□ -0.32
COL5A1-208ENST00000618395 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP13.05□□□□□ -0.32
COL5A1-208ENST00000618395 SSTR5P35346 364 aa13.05□□□□□ -0.32
COL5A1-208ENST00000618395 BOD1L2Q8IYS8 172 aa13.05□□□□□ -0.32
COL5A1-208ENST00000618395 MRPS21P82921 87 aaKnown RBP13.05□□□□□ -0.32
COL5A1-208ENST00000618395 SPRED2Q7Z698 418 aa13.05□□□□□ -0.32
COL5A1-208ENST00000618395 FOXB1Q99853 325 aa13.05□□□□□ -0.32
COL5A1-208ENST00000618395 CICQ96RK0 1608 aaPredicted RBP13.05□□□□□ -0.32
COL5A1-208ENST00000618395 GAGE1Q13065 139 aa13.05□□□□□ -0.32
COL5A1-208ENST00000618395 THSD4Q6ZMP0 1018 aa13.05□□□□□ -0.32
COL5A1-208ENST00000618395 SPRY3O43610 288 aa13.04□□□□□ -0.32
COL5A1-208ENST00000618395 GPR146Q96CH1 333 aa13.04□□□□□ -0.32
COL5A1-208ENST00000618395 PLXNA1Q9UIW2 1896 aa13.04□□□□□ -0.32
COL5A1-208ENST00000618395 CYP2G1PQ6ZSU1 146 aa13.04□□□□□ -0.32
COL5A1-208ENST00000618395 PGPA6NDG6 321 aa13.04□□□□□ -0.32
COL5A1-208ENST00000618395 CXCL12P48061 93 aa13.04□□□□□ -0.32
COL5A1-208ENST00000618395 ORMDL3Q8N138 153 aa13.04□□□□□ -0.32
COL5A1-208ENST00000618395 ALG1L2C9J202 215 aa13.04□□□□□ -0.32
COL5A1-208ENST00000618395 FAM90A26D6RGX4 464 aa13.04□□□□□ -0.32
COL5A1-208ENST00000618395 CDC42EP2O14613 210 aa13.04□□□□□ -0.32
COL5A1-208ENST00000618395 DPM2O94777 84 aa13.04□□□□□ -0.32
COL5A1-208ENST00000618395 ADMP35318 185 aa13.04□□□□□ -0.32
COL5A1-208ENST00000618395 ZADH2Q8N4Q0 377 aa13.04□□□□□ -0.32
COL5A1-208ENST00000618395 ASB10Q8WXI3 467 aa13.04□□□□□ -0.32
COL5A1-208ENST00000618395 OR2H1Q9GZK4 316 aa13.04□□□□□ -0.32
COL5A1-208ENST00000618395 SSPNQ14714 243 aa13.04□□□□□ -0.32
COL5A1-208ENST00000618395 CAMTA1Q9Y6Y1 1673 aa13.04□□□□□ -0.32
COL5A1-208ENST00000618395 IGHV3-13P01766 116 aa13.04□□□□□ -0.32
COL5A1-208ENST00000618395 IGHV3-7P01780 117 aa13.04□□□□□ -0.32
COL5A1-208ENST00000618395 OR13H1Q8NG92 308 aa13.03□□□□□ -0.32
COL5A1-208ENST00000618395 PLPPR1Q8TBJ4 325 aa13.03□□□□□ -0.32
COL5A1-208ENST00000618395 MRGPRX1Q96LB2 322 aa13.03□□□□□ -0.32
COL5A1-208ENST00000618395 PROCRQ9UNN8 238 aa13.03□□□□□ -0.32
COL5A1-208ENST00000618395 CTLA4P16410 223 aa13.03□□□□□ -0.32
COL5A1-208ENST00000618395 DSCR4P56555 118 aaPredicted RBP13.03□□□□□ -0.32
COL5A1-208ENST00000618395 GP6Q9HCN6 339 aa13.03□□□□□ -0.32
COL5A1-208ENST00000618395 NKX2-8O15522 239 aa13.03□□□□□ -0.32
COL5A1-208ENST00000618395 CNTFRP26992 372 aa13.03□□□□□ -0.32
COL5A1-208ENST00000618395 RPL31P62899 125 aaKnown RBP13.03□□□□□ -0.32
COL5A1-208ENST00000618395 GOLT1AQ6ZVE7 132 aa13.03□□□□□ -0.32
COL5A1-208ENST00000618395 BADQ92934 168 aa13.03□□□□□ -0.32
COL5A1-208ENST00000618395 UNQ5815/PRO19632Q6UWF5 114 aa13.03□□□□□ -0.32
COL5A1-208ENST00000618395 CNRIP1Q96F85 164 aaPredicted RBP13.03□□□□□ -0.32
COL5A1-208ENST00000618395 NDUFC2O95298 119 aa13.03□□□□□ -0.32
COL5A1-208ENST00000618395 EFNB2P52799 333 aa13.03□□□□□ -0.32
COL5A1-208ENST00000618395 ADAMTSL5Q6ZMM2 481 aa13.03□□□□□ -0.32
COL5A1-208ENST00000618395 ODAMA1E959 279 aa13.03□□□□□ -0.32
COL5A1-208ENST00000618395 PIGYQ3MUY2 71 aa13.03□□□□□ -0.32
COL5A1-208ENST00000618395 RNF182Q8N6D2 247 aa13.03□□□□□ -0.32
COL5A1-208ENST00000618395 A0A1B0GTL3 188 aa13.03□□□□□ -0.32
COL5A1-208ENST00000618395 TCRBV5S1A1TA0A578 114 aa13.03□□□□□ -0.32
COL5A1-208ENST00000618395 TSPOP30536 169 aa13.03□□□□□ -0.32
COL5A1-208ENST00000618395 MSRB3Q8IXL7 192 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms