RNA–Protein interactions for RNA: ENST00000617647.4

PDE6A-205, Transcript of phosphodiesterase 6A, humanhuman

TSL 1 (best) BASIC

Gene PDE6A, Length 4,039 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6A-205ENST00000617647 CT45A6P0DMU7 189 aa6.31□□□□□ -1.4
PDE6A-205ENST00000617647 CT45A5P0DMU8 189 aa6.31□□□□□ -1.4
PDE6A-205ENST00000617647 CT45A7P0DMV0 189 aa6.31□□□□□ -1.4
PDE6A-205ENST00000617647 GNB1P62873 340 aa6.31□□□□□ -1.4
PDE6A-205ENST00000617647 CT45A1Q5HYN5 189 aa6.31□□□□□ -1.4
PDE6A-205ENST00000617647 PRSS57Q6UWY2 283 aa6.31□□□□□ -1.4
PDE6A-205ENST00000617647 C1QL2Q7Z5L3 287 aa6.31□□□□□ -1.4
PDE6A-205ENST00000617647 OSR2Q8N2R0 312 aa6.31□□□□□ -1.4
PDE6A-205ENST00000617647 CT45A3Q8NHU0 189 aa6.31□□□□□ -1.4
PDE6A-205ENST00000617647 ZFYVE21Q9BQ24 234 aa6.31□□□□□ -1.4
PDE6A-205ENST00000617647 PHF7Q9BWX1 381 aaPredicted RBP6.31□□□□□ -1.4
PDE6A-205ENST00000617647 ENY2Q9NPA8 101 aa6.31□□□□□ -1.4
PDE6A-205ENST00000617647 KIR2DS1A0A191URI9 304 aa6.31□□□□□ -1.4
PDE6A-205ENST00000617647 RER1O15258 196 aa6.31□□□□□ -1.4
PDE6A-205ENST00000617647 KLF7O75840 302 aaPredicted RBP6.31□□□□□ -1.4
PDE6A-205ENST00000617647 PSG2P11465 335 aa6.31□□□□□ -1.4
PDE6A-205ENST00000617647 KIR2DS4P43632 304 aa6.31□□□□□ -1.4
PDE6A-205ENST00000617647 RHOBP62745 196 aa6.31□□□□□ -1.4
PDE6A-205ENST00000617647 KIR2DS1Q14954 304 aa6.31□□□□□ -1.4
PDE6A-205ENST00000617647 ZNF726P1Q15940 193 aa6.31□□□□□ -1.4
PDE6A-205ENST00000617647 ETDBQ3ZM63 59 aa6.31□□□□□ -1.4
PDE6A-205ENST00000617647 TIMM23BQ5SRD1 257 aa6.31□□□□□ -1.4
PDE6A-205ENST00000617647 RSPO2Q6UXX9 243 aaPredicted RBP6.31□□□□□ -1.4
PDE6A-205ENST00000617647 ZDHHC23Q8IYP9 409 aa6.31□□□□□ -1.4
PDE6A-205ENST00000617647 TPRX1Q8N7U7 411 aa6.31□□□□□ -1.4
PDE6A-205ENST00000617647 SPTSSAQ969W0 71 aa6.31□□□□□ -1.4
PDE6A-205ENST00000617647 NPFFR1Q9GZQ6 430 aa6.31□□□□□ -1.4
PDE6A-205ENST00000617647 YAE1D1Q9NRH1 226 aa6.31□□□□□ -1.4
PDE6A-205ENST00000617647 RNF115Q9Y4L5 304 aa6.31□□□□□ -1.4
PDE6A-205ENST00000617647 KNL1Q8NG31 2342 aa6.31□□□□□ -1.4
PDE6A-205ENST00000617647 TRAV9-1A0A075B6T8 112 aa6.3□□□□□ -1.4
PDE6A-205ENST00000617647 PSMB11A5LHX3 300 aa6.3□□□□□ -1.4
PDE6A-205ENST00000617647 H0YGG7 62 aa6.3□□□□□ -1.4
PDE6A-205ENST00000617647 IGHG1P01857 330 aa6.3□□□□□ -1.4
PDE6A-205ENST00000617647 CTRLP40313 264 aa6.3□□□□□ -1.4
PDE6A-205ENST00000617647 ANXA2RQ3ZCQ2 193 aa6.3□□□□□ -1.4
PDE6A-205ENST00000617647 IBA57Q5T440 356 aaKnown RBP6.3□□□□□ -1.4
PDE6A-205ENST00000617647 PQLC2Q6ZP29 291 aa6.3□□□□□ -1.4
PDE6A-205ENST00000617647 RNF144BQ7Z419 303 aa6.3□□□□□ -1.4
PDE6A-205ENST00000617647 PRSS3P2Q8NHM4 247 aa6.3□□□□□ -1.4
PDE6A-205ENST00000617647 ZNF721Q8TF20 911 aa6.3□□□□□ -1.4
PDE6A-205ENST00000617647 CT55Q8WUE5 264 aa6.3□□□□□ -1.4
PDE6A-205ENST00000617647 LSM10Q969L4 123 aaKnown RBP6.3□□□□□ -1.4
PDE6A-205ENST00000617647 ZNF501Q96CX3 271 aaPredicted RBP6.3□□□□□ -1.4
PDE6A-205ENST00000617647 MMABQ96EY8 250 aaPredicted RBP6.3□□□□□ -1.4
PDE6A-205ENST00000617647 TPPP3Q9BW30 176 aa6.3□□□□□ -1.4
PDE6A-205ENST00000617647 SSBP3Q9BWW4 388 aaPredicted RBP6.3□□□□□ -1.4
PDE6A-205ENST00000617647 FAM60AQ9NP50 221 aa6.3□□□□□ -1.4
PDE6A-205ENST00000617647 H3BVH4 76 aa6.3□□□□□ -1.4
PDE6A-205ENST00000617647 LIPFP07098 398 aa6.3□□□□□ -1.4
PDE6A-205ENST00000617647 ZNF137PP52743 207 aa6.3□□□□□ -1.4
PDE6A-205ENST00000617647 RPL8P62917 257 aaKnown RBP6.3□□□□□ -1.4
PDE6A-205ENST00000617647 ZIC1Q15915 447 aa6.3□□□□□ -1.4
PDE6A-205ENST00000617647 ZNF141Q15928 474 aa6.3□□□□□ -1.4
PDE6A-205ENST00000617647 PLPPR1Q8TBJ4 325 aa6.3□□□□□ -1.4
PDE6A-205ENST00000617647 C8orf44Q96CB5 159 aa6.3□□□□□ -1.4
PDE6A-205ENST00000617647 RTTNQ86VV8 2226 aa6.3□□□□□ -1.4
PDE6A-205ENST00000617647 TMEM150CB9EJG8 249 aa6.3□□□□□ -1.4
PDE6A-205ENST00000617647 APOMO95445 188 aa6.3□□□□□ -1.4
PDE6A-205ENST00000617647 EML2O95834 649 aa6.3□□□□□ -1.4
PDE6A-205ENST00000617647 ASAH2BP0C7U1 165 aa6.3□□□□□ -1.4
PDE6A-205ENST00000617647 SRFP11831 508 aa6.3□□□□□ -1.4
PDE6A-205ENST00000617647 RPL31P62899 125 aaKnown RBP6.3□□□□□ -1.4
PDE6A-205ENST00000617647 DMWDQ09019 674 aa6.3□□□□□ -1.4
PDE6A-205ENST00000617647 MS4A5Q9H3V2 200 aa6.3□□□□□ -1.4
PDE6A-205ENST00000617647 THAP10Q9P2Z0 257 aaPredicted RBP6.3□□□□□ -1.4
PDE6A-205ENST00000617647 WNT6Q9Y6F9 365 aa6.3□□□□□ -1.4
PDE6A-205ENST00000617647 TRBV7-9A0A0J9YWB2 115 aa6.29□□□□□ -1.4
PDE6A-205ENST00000617647 H3BRM9 83 aa6.29□□□□□ -1.4
PDE6A-205ENST00000617647 IGKV1D-16P01601 117 aa6.29□□□□□ -1.4
PDE6A-205ENST00000617647 CRYBB3P26998 211 aa6.29□□□□□ -1.4
PDE6A-205ENST00000617647 PIGYQ3MUY2 71 aa6.29□□□□□ -1.4
PDE6A-205ENST00000617647 PRR31Q5SQ13 230 aa6.29□□□□□ -1.4
PDE6A-205ENST00000617647 ARTNQ5T4W7 220 aa6.29□□□□□ -1.4
PDE6A-205ENST00000617647 LYSMD4Q5XG99 296 aa6.29□□□□□ -1.4
PDE6A-205ENST00000617647 ZFAND6Q6FIF0 208 aa6.29□□□□□ -1.4
PDE6A-205ENST00000617647 ANKRD37Q7Z713 158 aa6.29□□□□□ -1.4
PDE6A-205ENST00000617647 ZIC4Q8N9L1 334 aa6.29□□□□□ -1.4
PDE6A-205ENST00000617647 FGF14Q92915 247 aa6.29□□□□□ -1.4
PDE6A-205ENST00000617647 PNRC2Q9NPJ4 139 aaKnown RBP6.29□□□□□ -1.4
PDE6A-205ENST00000617647 IGKV1D-42A0A075B6H8 117 aa6.29□□□□□ -1.4
PDE6A-205ENST00000617647 C5orf49A4QMS7 147 aa6.29□□□□□ -1.4
PDE6A-205ENST00000617647 ARL14EPLP0DKL9 152 aa6.29□□□□□ -1.4
PDE6A-205ENST00000617647 CFPP27918 469 aa6.29□□□□□ -1.4
PDE6A-205ENST00000617647 FAM69BQ5VUD6 431 aa6.29□□□□□ -1.4
PDE6A-205ENST00000617647 PRSS41Q7RTY9 318 aa6.29□□□□□ -1.4
PDE6A-205ENST00000617647 LRTM2Q8N967 370 aa6.29□□□□□ -1.4
PDE6A-205ENST00000617647 C16orf52Q8NHV5 167 aa6.29□□□□□ -1.4
PDE6A-205ENST00000617647 UBALD1Q8TB05 177 aa6.29□□□□□ -1.4
PDE6A-205ENST00000617647 RNASE7Q9H1E1 156 aaKnown RBP6.29□□□□□ -1.4
PDE6A-205ENST00000617647 UBE2ZQ9H832 354 aaPredicted RBP6.29□□□□□ -1.4
PDE6A-205ENST00000617647 PCNTO95613 3336 aa6.29□□□□□ -1.4
PDE6A-205ENST00000617647 IGLV1-36A0A0B4J1U3 117 aa6.29□□□□□ -1.4
PDE6A-205ENST00000617647 YPEL1O60688 119 aa6.29□□□□□ -1.4
PDE6A-205ENST00000617647 CXorf1O96002 111 aa6.29□□□□□ -1.4
PDE6A-205ENST00000617647 CELA3BP08861 270 aa6.29□□□□□ -1.4
PDE6A-205ENST00000617647 CD38P28907 300 aa6.29□□□□□ -1.4
PDE6A-205ENST00000617647 ZNF816Q0VGE8 651 aaPredicted RBP6.29□□□□□ -1.4
PDE6A-205ENST00000617647 ZP4Q12836 540 aa6.29□□□□□ -1.4
PDE6A-205ENST00000617647 CLLU1OSQ5K130 101 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms