RNA–Protein interactions for RNA: ENST00000617641.4

PCDHGC3-205, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 1 (best) BASIC

Gene PCDHGC3, Length 2,346 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-205ENST00000617641 TAS2R30P59541 319 aa14.26□□□□□ -0.13
PCDHGC3-205ENST00000617641 MRPS11P82912 194 aaKnown RBP14.26□□□□□ -0.13
PCDHGC3-205ENST00000617641 LRRC10Q5BKY1 277 aa14.26□□□□□ -0.13
PCDHGC3-205ENST00000617641 TMEM200BQ69YZ2 307 aa14.26□□□□□ -0.13
PCDHGC3-205ENST00000617641 SSX9Q7RTT3 188 aa14.26□□□□□ -0.13
PCDHGC3-205ENST00000617641 HAPLN4Q86UW8 402 aa14.26□□□□□ -0.13
PCDHGC3-205ENST00000617641 DDB2Q92466 427 aa14.26□□□□□ -0.13
PCDHGC3-205ENST00000617641 S1PR3Q99500 378 aa14.26□□□□□ -0.13
PCDHGC3-205ENST00000617641 TMEM204Q9BSN7 226 aa14.26□□□□□ -0.13
PCDHGC3-205ENST00000617641 PRELID3BQ9Y3B1 194 aa14.26□□□□□ -0.13
PCDHGC3-205ENST00000617641 OR9G9P0C7N8 305 aa14.25□□□□□ -0.13
PCDHGC3-205ENST00000617641 RUNX1Q01196 453 aa14.25□□□□□ -0.13
PCDHGC3-205ENST00000617641 PJVKQ0ZLH3 352 aa14.25□□□□□ -0.13
PCDHGC3-205ENST00000617641 HFEQ30201 348 aa14.25□□□□□ -0.13
PCDHGC3-205ENST00000617641 UQCC3Q6UW78 93 aa14.25□□□□□ -0.13
PCDHGC3-205ENST00000617641 IL34Q6ZMJ4 242 aa14.25□□□□□ -0.13
PCDHGC3-205ENST00000617641 VKORC1L1Q8N0U8 176 aa14.25□□□□□ -0.13
PCDHGC3-205ENST00000617641 ZNF436-AS1Q8NC38 126 aaPredicted RBP14.25□□□□□ -0.13
PCDHGC3-205ENST00000617641 GAL3ST2Q9H3Q3 398 aa14.25□□□□□ -0.13
PCDHGC3-205ENST00000617641 CACFD1Q9UGQ2 172 aa14.25□□□□□ -0.13
PCDHGC3-205ENST00000617641 MED19A0JLT2 244 aaPredicted RBP14.25□□□□□ -0.13
PCDHGC3-205ENST00000617641 NUDT19A8MXV4 375 aa14.25□□□□□ -0.13
PCDHGC3-205ENST00000617641 TMEM30BQ3MIR4 351 aa14.25□□□□□ -0.13
PCDHGC3-205ENST00000617641 SPINK9Q5DT21 86 aa14.25□□□□□ -0.13
PCDHGC3-205ENST00000617641 OR2G3Q8NGZ4 309 aa14.25□□□□□ -0.13
PCDHGC3-205ENST00000617641 ZDHHC16Q969W1 377 aa14.25□□□□□ -0.13
PCDHGC3-205ENST00000617641 RBMXL1Q96E39 390 aaKnown RBP14.25□□□□□ -0.13
PCDHGC3-205ENST00000617641 ZNF714Q96N38 554 aa14.25□□□□□ -0.13
PCDHGC3-205ENST00000617641 TMEM231Q9H6L2 316 aa14.25□□□□□ -0.13
PCDHGC3-205ENST00000617641 LRBAP50851 2863 aa14.24□□□□□ -0.13
PCDHGC3-205ENST00000617641 AGPAT2O15120 278 aa14.24□□□□□ -0.13
PCDHGC3-205ENST00000617641 RBFOX2O43251 390 aaKnown RBP eCLIP14.24□□□□□ -0.13
PCDHGC3-205ENST00000617641 PRH1P02810 166 aa14.24□□□□□ -0.13
PCDHGC3-205ENST00000617641 COL8A2P25067 703 aa14.24□□□□□ -0.13
PCDHGC3-205ENST00000617641 CAMLGP49069 296 aa14.24□□□□□ -0.13
PCDHGC3-205ENST00000617641 F2RL1P55085 397 aa14.24□□□□□ -0.13
PCDHGC3-205ENST00000617641 OR2B8PP59922 312 aa14.24□□□□□ -0.13
PCDHGC3-205ENST00000617641 SLC25A48Q6ZT89 311 aaKnown RBP14.24□□□□□ -0.13
PCDHGC3-205ENST00000617641 HCFC1P51610 2035 aa14.24□□□□□ -0.13
PCDHGC3-205ENST00000617641 ZG16O60844 167 aa14.24□□□□□ -0.13
PCDHGC3-205ENST00000617641 TAGLNQ01995 201 aaKnown RBP14.24□□□□□ -0.13
PCDHGC3-205ENST00000617641 ZNF616Q08AN1 781 aa14.24□□□□□ -0.13
PCDHGC3-205ENST00000617641 QTRT1Q9BXR0 403 aaKnown RBP14.24□□□□□ -0.13
PCDHGC3-205ENST00000617641 MS4A7Q9GZW8 240 aaPredicted RBP14.24□□□□□ -0.13
PCDHGC3-205ENST00000617641 KAAG1Q9UBP8 84 aa14.24□□□□□ -0.13
PCDHGC3-205ENST00000617641 TPRP12270 2363 aaKnown RBP14.23□□□□□ -0.13
PCDHGC3-205ENST00000617641 DFFBO76075 338 aa14.23□□□□□ -0.13
PCDHGC3-205ENST00000617641 KIR2DS2P43631 304 aa14.23□□□□□ -0.13
PCDHGC3-205ENST00000617641 UQCRFS1P47985 274 aa14.23□□□□□ -0.13
PCDHGC3-205ENST00000617641 FAM122CQ6P4D5 195 aa14.23□□□□□ -0.13
PCDHGC3-205ENST00000617641 HEPN1Q6WQI6 88 aa14.23□□□□□ -0.13
PCDHGC3-205ENST00000617641 ZNF383Q8NA42 475 aa14.23□□□□□ -0.13
PCDHGC3-205ENST00000617641 FAM96BQ9Y3D0 163 aa14.23□□□□□ -0.13
PCDHGC3-205ENST00000617641 LILRB2Q8N423 598 aa14.23□□□□□ -0.13
PCDHGC3-205ENST00000617641 OR4S2Q8NH73 311 aa14.23□□□□□ -0.13
PCDHGC3-205ENST00000617641 LYPD6BQ8NI32 183 aa14.23□□□□□ -0.13
PCDHGC3-205ENST00000617641 DTD1Q8TEA8 209 aa14.23□□□□□ -0.13
PCDHGC3-205ENST00000617641 OR4C12Q96R67 309 aa14.23□□□□□ -0.13
PCDHGC3-205ENST00000617641 TSNAXQ99598 290 aaKnown RBP14.23□□□□□ -0.13
PCDHGC3-205ENST00000617641 NUP50Q9UKX7 468 aa14.23□□□□□ -0.13
PCDHGC3-205ENST00000617641 ABCA4P78363 2273 aa14.22□□□□□ -0.13
PCDHGC3-205ENST00000617641 PKD1L2Q7Z442 2459 aa14.22□□□□□ -0.13
PCDHGC3-205ENST00000617641 APOC3P02656 99 aa14.22□□□□□ -0.13
PCDHGC3-205ENST00000617641 DAOP14920 347 aa14.22□□□□□ -0.13
PCDHGC3-205ENST00000617641 THBS3P49746 956 aa14.22□□□□□ -0.13
PCDHGC3-205ENST00000617641 RAB5CP51148 216 aa14.22□□□□□ -0.13
PCDHGC3-205ENST00000617641 ERVK-16P61578 105 aa14.22□□□□□ -0.13
PCDHGC3-205ENST00000617641 TMEM14EPQ6UXP3 125 aa14.22□□□□□ -0.13
PCDHGC3-205ENST00000617641 ZNF525Q8N782 197 aa14.22□□□□□ -0.13
PCDHGC3-205ENST00000617641 OR10A7Q8NGE5 316 aa14.22□□□□□ -0.13
PCDHGC3-205ENST00000617641 FAM213BQ8TBF2 198 aa14.22□□□□□ -0.13
PCDHGC3-205ENST00000617641 TREM1Q9NP99 234 aa14.22□□□□□ -0.13
PCDHGC3-205ENST00000617641 STRAPQ9Y3F4 350 aaKnown RBP14.22□□□□□ -0.13
PCDHGC3-205ENST00000617641 DOCK11Q5JSL3 2073 aa14.22□□□□□ -0.13
PCDHGC3-205ENST00000617641 TMEM218A2RU14 115 aa14.21□□□□□ -0.13
PCDHGC3-205ENST00000617641 CEBPZOSA8MTT3 80 aa14.21□□□□□ -0.13
PCDHGC3-205ENST00000617641 IFNA5P01569 189 aa14.21□□□□□ -0.13
PCDHGC3-205ENST00000617641 NQO2P16083 231 aa14.21□□□□□ -0.13
PCDHGC3-205ENST00000617641 ARHGDIBP52566 201 aa14.21□□□□□ -0.13
PCDHGC3-205ENST00000617641 HBG1P69891 147 aa14.21□□□□□ -0.13
PCDHGC3-205ENST00000617641 HBG2P69892 147 aa14.21□□□□□ -0.13
PCDHGC3-205ENST00000617641 OR8G2PQ6IF36 304 aa14.21□□□□□ -0.13
PCDHGC3-205ENST00000617641 SLC25A24Q6NUK1 477 aa14.21□□□□□ -0.13
PCDHGC3-205ENST00000617641 GNPNAT1Q96EK6 184 aaPredicted RBP14.21□□□□□ -0.13
PCDHGC3-205ENST00000617641 HIVEP3Q5T1R4 2406 aa14.21□□□□□ -0.13
PCDHGC3-205ENST00000617641 TRAV3A0A0B4J244 114 aa14.21□□□□□ -0.13
PCDHGC3-205ENST00000617641 NDUFA2O43678 99 aa14.21□□□□□ -0.13
PCDHGC3-205ENST00000617641 PPOXP50336 477 aa14.21□□□□□ -0.13
PCDHGC3-205ENST00000617641 TSPAN15O95858 294 aa14.2□□□□□ -0.14
PCDHGC3-205ENST00000617641 GNLYP22749 145 aa14.2□□□□□ -0.14
PCDHGC3-205ENST00000617641 THNSL2Q86YJ6 484 aa14.2□□□□□ -0.14
PCDHGC3-205ENST00000617641 OR4A16Q8NH70 328 aa14.2□□□□□ -0.14
PCDHGC3-205ENST00000617641 ADTRPQ96IZ2 230 aa14.2□□□□□ -0.14
PCDHGC3-205ENST00000617641 TMEM140Q9NV12 185 aa14.2□□□□□ -0.14
PCDHGC3-205ENST00000617641 TRIM77I1YAP6 450 aa14.2□□□□□ -0.14
PCDHGC3-205ENST00000617641 IFNA17P01571 189 aa14.2□□□□□ -0.14
PCDHGC3-205ENST00000617641 RPS16P62249 146 aaKnown RBP14.2□□□□□ -0.14
PCDHGC3-205ENST00000617641 SLC38A11Q08AI6 406 aa14.2□□□□□ -0.14
PCDHGC3-205ENST00000617641 HRNRQ86YZ3 2850 aaPredicted RBP14.2□□□□□ -0.14
PCDHGC3-205ENST00000617641 FAM90A9PA6NNJ1 464 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms