RNA–Protein interactions for RNA: ENST00000617103.4

CLTCL1-209, Transcript of clathrin heavy chain like 1, humanhuman

TSL 1 (best)

Gene CLTCL1, Length 4,859 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-209ENST00000617103 RBPMS2Q6ZRY4 209 aaKnown RBP9.14□□□□□ -0.95
CLTCL1-209ENST00000617103 APOBEC4Q8WW27 367 aaKnown RBP9.14□□□□□ -0.95
CLTCL1-209ENST00000617103 ZDHHC16Q969W1 377 aa9.14□□□□□ -0.95
CLTCL1-209ENST00000617103 PAPPAQ13219 1627 aa9.14□□□□□ -0.95
CLTCL1-209ENST00000617103 LOC390937A0A1W2PQ73 354 aa9.14□□□□□ -0.95
CLTCL1-209ENST00000617103 EGR4Q05215 589 aa9.14□□□□□ -0.95
CLTCL1-209ENST00000617103 MMDQ15546 238 aa9.14□□□□□ -0.95
CLTCL1-209ENST00000617103 CENPWQ5EE01 88 aa9.14□□□□□ -0.95
CLTCL1-209ENST00000617103 RIPPLY2Q5TAB7 128 aa9.14□□□□□ -0.95
CLTCL1-209ENST00000617103 ASPHD2Q6ICH7 369 aa9.14□□□□□ -0.95
CLTCL1-209ENST00000617103 RTBDNQ9BSG5 229 aaPredicted RBP9.14□□□□□ -0.95
CLTCL1-209ENST00000617103 WNT10AQ9GZT5 417 aa9.14□□□□□ -0.95
CLTCL1-209ENST00000617103 OPN3Q9H1Y3 402 aaPredicted RBP9.14□□□□□ -0.95
CLTCL1-209ENST00000617103 HEXA-AS1Q9H8Q6 139 aa9.14□□□□□ -0.95
CLTCL1-209ENST00000617103 IL36BQ9NZH7 164 aa9.14□□□□□ -0.95
CLTCL1-209ENST00000617103 A0A1W2PRD5 423 aa9.14□□□□□ -0.95
CLTCL1-209ENST00000617103 A0A1W2PRF3 423 aa9.14□□□□□ -0.95
CLTCL1-209ENST00000617103 A0A1W2PRM7 423 aa9.14□□□□□ -0.95
CLTCL1-209ENST00000617103 A1L4Q6 167 aa9.14□□□□□ -0.95
CLTCL1-209ENST00000617103 GREM1O60565 184 aa9.14□□□□□ -0.95
CLTCL1-209ENST00000617103 LY6G6FQ5SQ64 297 aa9.14□□□□□ -0.95
CLTCL1-209ENST00000617103 CLDND2Q8NHS1 167 aa9.14□□□□□ -0.95
CLTCL1-209ENST00000617103 ZNF501Q96CX3 271 aaPredicted RBP9.14□□□□□ -0.95
CLTCL1-209ENST00000617103 RNF126Q9BV68 326 aa9.14□□□□□ -0.95
CLTCL1-209ENST00000617103 TNFRSF19Q9NS68 423 aa9.14□□□□□ -0.95
CLTCL1-209ENST00000617103 TCF19Q9Y242 345 aa9.14□□□□□ -0.95
CLTCL1-209ENST00000617103 ZNFX1Q9P2E3 1918 aaKnown RBP9.14□□□□□ -0.95
CLTCL1-209ENST00000617103 A0A1W2PQF6 199 aa9.14□□□□□ -0.95
CLTCL1-209ENST00000617103 F8VVB4 439 aa9.14□□□□□ -0.95
CLTCL1-209ENST00000617103 F8VWA3 439 aa9.14□□□□□ -0.95
CLTCL1-209ENST00000617103 MC5RP33032 325 aa9.14□□□□□ -0.95
CLTCL1-209ENST00000617103 TTC32Q5I0X7 151 aa9.14□□□□□ -0.95
CLTCL1-209ENST00000617103 TCF24Q7RTU0 167 aa9.14□□□□□ -0.95
CLTCL1-209ENST00000617103 NABP2Q9BQ15 211 aa9.14□□□□□ -0.95
CLTCL1-209ENST00000617103 CACNA1DQ01668 2161 aa9.13□□□□□ -0.95
CLTCL1-209ENST00000617103 RND2P52198 227 aa9.13□□□□□ -0.95
CLTCL1-209ENST00000617103 RTP5Q14D33 572 aa9.13□□□□□ -0.95
CLTCL1-209ENST00000617103 OR51G1Q8NGK1 321 aa9.13□□□□□ -0.95
CLTCL1-209ENST00000617103 GATAD1Q8WUU5 269 aa9.13□□□□□ -0.95
CLTCL1-209ENST00000617103 SRSF12Q8WXF0 261 aaKnown RBP9.13□□□□□ -0.95
CLTCL1-209ENST00000617103 IGHV5-10-1A0A0J9YXX1 117 aa9.13□□□□□ -0.95
CLTCL1-209ENST00000617103 NUDT3O95989 172 aa9.13□□□□□ -0.95
CLTCL1-209ENST00000617103 UCP1P25874 307 aa9.13□□□□□ -0.95
CLTCL1-209ENST00000617103 TNFSF10P50591 281 aa9.13□□□□□ -0.95
CLTCL1-209ENST00000617103 UCP2P55851 309 aa9.13□□□□□ -0.95
CLTCL1-209ENST00000617103 KRTCAP3Q53RY4 240 aa9.13□□□□□ -0.95
CLTCL1-209ENST00000617103 NEU1Q99519 415 aa9.13□□□□□ -0.95
CLTCL1-209ENST00000617103 RAB1BQ9H0U4 201 aa9.13□□□□□ -0.95
CLTCL1-209ENST00000617103 F11RQ9Y624 299 aaKnown RBP9.13□□□□□ -0.95
CLTCL1-209ENST00000617103 RPS20P60866 119 aaKnown RBP9.13□□□□□ -0.95
CLTCL1-209ENST00000617103 HBBP68871 147 aa9.13□□□□□ -0.95
CLTCL1-209ENST00000617103 SRSF3P84103 164 aaKnown RBP9.13□□□□□ -0.95
CLTCL1-209ENST00000617103 MESP2Q0VG99 397 aa9.13□□□□□ -0.95
CLTCL1-209ENST00000617103 C2orf83Q53S99 150 aa9.13□□□□□ -0.95
CLTCL1-209ENST00000617103 DRAM1Q8N682 238 aa9.13□□□□□ -0.95
CLTCL1-209ENST00000617103 SSBP3Q9BWW4 388 aaPredicted RBP9.13□□□□□ -0.95
CLTCL1-209ENST00000617103 TM2D1Q9BX74 207 aa9.13□□□□□ -0.95
CLTCL1-209ENST00000617103 SLC25A10Q9UBX3 287 aaPredicted RBP9.13□□□□□ -0.95
CLTCL1-209ENST00000617103 USP54Q70EL1 1684 aa9.13□□□□□ -0.95
CLTCL1-209ENST00000617103 TRAV9-1A0A075B6T8 112 aa9.13□□□□□ -0.95
CLTCL1-209ENST00000617103 SMIM13P0DJ93 91 aa9.13□□□□□ -0.95
CLTCL1-209ENST00000617103 WDR31Q8NA23 367 aa9.13□□□□□ -0.95
CLTCL1-209ENST00000617103 MRPL32Q9BYC8 188 aaKnown RBP9.13□□□□□ -0.95
CLTCL1-209ENST00000617103 PRDM14Q9GZV8 571 aa9.13□□□□□ -0.95
CLTCL1-209ENST00000617103 MS4A5Q9H3V2 200 aa9.13□□□□□ -0.95
CLTCL1-209ENST00000617103 PRDM13Q9H4Q3 707 aa9.13□□□□□ -0.95
CLTCL1-209ENST00000617103 ZNF318Q5VUA4 2279 aa9.12□□□□□ -0.95
CLTCL1-209ENST00000617103 HIST1H2BKO60814 126 aa9.12□□□□□ -0.95
CLTCL1-209ENST00000617103 HIST1H2BJP06899 126 aa9.12□□□□□ -0.95
CLTCL1-209ENST00000617103 HIST1H2BOP23527 126 aa9.12□□□□□ -0.95
CLTCL1-209ENST00000617103 HIST1H2BBP33778 126 aa9.12□□□□□ -0.95
CLTCL1-209ENST00000617103 HIST1H2BDP58876 126 aa9.12□□□□□ -0.95
CLTCL1-209ENST00000617103 ARF6P62330 175 aa9.12□□□□□ -0.95
CLTCL1-209ENST00000617103 HIST1H2BCP62807 126 aa9.12□□□□□ -0.95
CLTCL1-209ENST00000617103 HIST2H2BEQ16778 126 aa9.12□□□□□ -0.95
CLTCL1-209ENST00000617103 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.12□□□□□ -0.95
CLTCL1-209ENST00000617103 ABHD12Q8N2K0 398 aa9.12□□□□□ -0.95
CLTCL1-209ENST00000617103 HIST1H2BHQ93079 126 aa9.12□□□□□ -0.95
CLTCL1-209ENST00000617103 HIST1H2BNQ99877 126 aa9.12□□□□□ -0.95
CLTCL1-209ENST00000617103 HIST1H2BMQ99879 126 aa9.12□□□□□ -0.95
CLTCL1-209ENST00000617103 LAMTOR2Q9Y2Q5 125 aa9.12□□□□□ -0.95
CLTCL1-209ENST00000617103 ODAMA1E959 279 aa9.12□□□□□ -0.95
CLTCL1-209ENST00000617103 IL9P15248 144 aa9.12□□□□□ -0.95
CLTCL1-209ENST00000617103 JOSD1Q15040 202 aaPredicted RBP9.12□□□□□ -0.95
CLTCL1-209ENST00000617103 CHCHD2P9Q5T1J5 151 aaPredicted RBP9.12□□□□□ -0.95
CLTCL1-209ENST00000617103 TMEM78Q5T7P6 136 aa9.12□□□□□ -0.95
CLTCL1-209ENST00000617103 STPG3Q8N7X2 389 aa9.12□□□□□ -0.95
CLTCL1-209ENST00000617103 KCNS1Q96KK3 526 aa9.12□□□□□ -0.95
CLTCL1-209ENST00000617103 NPCDR1Q9BY65 106 aa9.12□□□□□ -0.95
CLTCL1-209ENST00000617103 LAMB2P55268 1798 aa9.12□□□□□ -0.95
CLTCL1-209ENST00000617103 H7C2G1 150 aa9.12□□□□□ -0.95
CLTCL1-209ENST00000617103 CD3EP07766 207 aa9.12□□□□□ -0.95
CLTCL1-209ENST00000617103 ATP5IP56385 69 aaPredicted RBP9.12□□□□□ -0.95
CLTCL1-209ENST00000617103 FOXL2P58012 376 aa9.12□□□□□ -0.95
CLTCL1-209ENST00000617103 TMEM170AQ8WVE7 144 aa9.12□□□□□ -0.95
CLTCL1-209ENST00000617103 RTTNQ86VV8 2226 aa9.12□□□□□ -0.95
CLTCL1-209ENST00000617103 C21orf140B9A014 251 aa9.11□□□□□ -0.95
CLTCL1-209ENST00000617103 CRXO43186 299 aaPredicted RBP9.11□□□□□ -0.95
CLTCL1-209ENST00000617103 ZIC3O60481 467 aa9.11□□□□□ -0.95
CLTCL1-209ENST00000617103 C1orf53Q5VUE5 145 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms