RNA–Protein interactions for RNA: ENST00000616710.4

TNFRSF11A-205, Transcript of TNF receptor superfamily member 11a, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TNFRSF11A, Length 3,809 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11A-205ENST00000616710 PCED1AQ9H1Q7 454 aa11.92□□□□□ -0.5
TNFRSF11A-205ENST00000616710 EP300Q09472 2414 aaPredicted RBP11.92□□□□□ -0.5
TNFRSF11A-205ENST00000616710 CTXN2P0C2S0 81 aa11.92□□□□□ -0.5
TNFRSF11A-205ENST00000616710 OR10J4P0C629 311 aa11.92□□□□□ -0.5
TNFRSF11A-205ENST00000616710 UCP1P25874 307 aa11.92□□□□□ -0.5
TNFRSF11A-205ENST00000616710 CAPZBP47756 277 aa11.92□□□□□ -0.5
TNFRSF11A-205ENST00000616710 MFAP2P55001 183 aa11.92□□□□□ -0.5
TNFRSF11A-205ENST00000616710 OCIAD2Q56VL3 154 aa11.92□□□□□ -0.5
TNFRSF11A-205ENST00000616710 TMEM211Q6ICI0 200 aa11.92□□□□□ -0.5
TNFRSF11A-205ENST00000616710 PQLC2Q6ZP29 291 aa11.92□□□□□ -0.5
TNFRSF11A-205ENST00000616710 CXorf67Q86X51 503 aaPredicted RBP11.92□□□□□ -0.5
TNFRSF11A-205ENST00000616710 MBD3L1Q8WWY6 194 aa11.92□□□□□ -0.5
TNFRSF11A-205ENST00000616710 DAZAP1Q96EP5 407 aaKnown RBP11.92□□□□□ -0.5
TNFRSF11A-205ENST00000616710 HS3ST6Q96QI5 342 aa11.92□□□□□ -0.5
TNFRSF11A-205ENST00000616710 PLXNA2O75051 1894 aa11.91□□□□□ -0.5
TNFRSF11A-205ENST00000616710 DUX1O43812 170 aa11.91□□□□□ -0.5
TNFRSF11A-205ENST00000616710 CXCL10P02778 98 aa11.91□□□□□ -0.5
TNFRSF11A-205ENST00000616710 NMSQ5H8A3 153 aa11.91□□□□□ -0.5
TNFRSF11A-205ENST00000616710 ZNF784Q8NCA9 323 aaPredicted RBP11.91□□□□□ -0.5
TNFRSF11A-205ENST00000616710 FNDC4Q9H6D8 234 aaPredicted RBP11.91□□□□□ -0.5
TNFRSF11A-205ENST00000616710 IL23AQ9NPF7 189 aa11.91□□□□□ -0.5
TNFRSF11A-205ENST00000616710 OR2W1Q9Y3N9 320 aa11.91□□□□□ -0.5
TNFRSF11A-205ENST00000616710 TRIOO75962 3097 aa11.91□□□□□ -0.5
TNFRSF11A-205ENST00000616710 PPIAL4DF5H284 164 aa11.91□□□□□ -0.5
TNFRSF11A-205ENST00000616710 IGLC2P0DOY2 106 aa11.91□□□□□ -0.5
TNFRSF11A-205ENST00000616710 IGLC3P0DOY3 106 aa11.91□□□□□ -0.5
TNFRSF11A-205ENST00000616710 CPT1CQ8TCG5 803 aa11.91□□□□□ -0.5
TNFRSF11A-205ENST00000616710 OR5P3Q8WZ94 311 aa11.91□□□□□ -0.5
TNFRSF11A-205ENST00000616710 EFNA2O43921 213 aa11.91□□□□□ -0.5
TNFRSF11A-205ENST00000616710 NEURL1O76050 574 aa11.91□□□□□ -0.5
TNFRSF11A-205ENST00000616710 EN2P19622 333 aaPredicted RBP11.91□□□□□ -0.5
TNFRSF11A-205ENST00000616710 ZNF137PP52743 207 aa11.91□□□□□ -0.5
TNFRSF11A-205ENST00000616710 HYAL1Q12794 435 aa11.91□□□□□ -0.5
TNFRSF11A-205ENST00000616710 PLXDC1Q8IUK5 500 aa11.91□□□□□ -0.5
TNFRSF11A-205ENST00000616710 RCHY1Q96PM5 261 aa11.91□□□□□ -0.5
TNFRSF11A-205ENST00000616710 SSBP4Q9BWG4 385 aaPredicted RBP11.91□□□□□ -0.5
TNFRSF11A-205ENST00000616710 OR2D2Q9H210 308 aa11.91□□□□□ -0.5
TNFRSF11A-205ENST00000616710 LIN7CQ9NUP9 197 aaKnown RBP11.91□□□□□ -0.5
TNFRSF11A-205ENST00000616710 PRR14LQ5THK1 2151 aa11.91□□□□□ -0.5
TNFRSF11A-205ENST00000616710 SYNGR1O43759 233 aa11.9□□□□□ -0.5
TNFRSF11A-205ENST00000616710 PIAS2O75928 621 aa11.9□□□□□ -0.5
TNFRSF11A-205ENST00000616710 PRB4P10163 310 aaPredicted RBP11.9□□□□□ -0.5
TNFRSF11A-205ENST00000616710 COA6Q5JTJ3 125 aaKnown RBP11.9□□□□□ -0.5
TNFRSF11A-205ENST00000616710 TPRX1Q8N7U7 411 aa11.9□□□□□ -0.5
TNFRSF11A-205ENST00000616710 OR1L3Q8NH93 324 aa11.9□□□□□ -0.5
TNFRSF11A-205ENST00000616710 TMEM56Q96MV1 263 aa11.9□□□□□ -0.5
TNFRSF11A-205ENST00000616710 TMEM56-RWDD3S4R434 201 aa11.9□□□□□ -0.5
TNFRSF11A-205ENST00000616710 H0Y980 276 aa11.9□□□□□ -0.5
TNFRSF11A-205ENST00000616710 CA7P43166 264 aa11.9□□□□□ -0.5
TNFRSF11A-205ENST00000616710 CDKN1BP46527 198 aa11.9□□□□□ -0.5
TNFRSF11A-205ENST00000616710 LINC00205P59089 165 aa11.9□□□□□ -0.5
TNFRSF11A-205ENST00000616710 NDUFB8O95169 186 aa11.9□□□□□ -0.5
TNFRSF11A-205ENST00000616710 GAB4Q2WGN9 574 aa11.9□□□□□ -0.5
TNFRSF11A-205ENST00000616710 SLC25A47Q6Q0C1 308 aa11.9□□□□□ -0.5
TNFRSF11A-205ENST00000616710 ORAOV1Q8WV07 137 aa11.9□□□□□ -0.5
TNFRSF11A-205ENST00000616710 PDE6DO43924 150 aa11.89□□□□□ -0.51
TNFRSF11A-205ENST00000616710 TM4SF20Q53R12 229 aa11.89□□□□□ -0.51
TNFRSF11A-205ENST00000616710 SLC22A18ASQ8N1D0 253 aa11.89□□□□□ -0.51
TNFRSF11A-205ENST00000616710 WDR54Q9H977 334 aa11.89□□□□□ -0.51
TNFRSF11A-205ENST00000616710 CACNA1BQ00975 2339 aa11.89□□□□□ -0.51
TNFRSF11A-205ENST00000616710 CADP27708 2225 aa11.89□□□□□ -0.51
TNFRSF11A-205ENST00000616710 TRAV1-1A0A0B4J248 108 aa11.89□□□□□ -0.51
TNFRSF11A-205ENST00000616710 CXCL13O43927 109 aa11.89□□□□□ -0.51
TNFRSF11A-205ENST00000616710 SAP30O75446 220 aa11.89□□□□□ -0.51
TNFRSF11A-205ENST00000616710 APCSP02743 223 aa11.89□□□□□ -0.51
TNFRSF11A-205ENST00000616710 GPX1P07203 203 aa11.89□□□□□ -0.51
TNFRSF11A-205ENST00000616710 CRYBB3P26998 211 aa11.89□□□□□ -0.51
TNFRSF11A-205ENST00000616710 PRDX4Q13162 271 aa11.89□□□□□ -0.51
TNFRSF11A-205ENST00000616710 RIPPLY2Q5TAB7 128 aa11.89□□□□□ -0.51
TNFRSF11A-205ENST00000616710 HAPLN4Q86UW8 402 aa11.89□□□□□ -0.51
TNFRSF11A-205ENST00000616710 OR52L2PQ8NGH6 319 aa11.89□□□□□ -0.51
TNFRSF11A-205ENST00000616710 LRRC61Q9BV99 259 aa11.89□□□□□ -0.51
TNFRSF11A-205ENST00000616710 COL4A6Q14031 1691 aa11.89□□□□□ -0.51
TNFRSF11A-205ENST00000616710 IGKV3-11P04433 115 aa11.89□□□□□ -0.51
TNFRSF11A-205ENST00000616710 PSG5Q15238 335 aa11.89□□□□□ -0.51
TNFRSF11A-205ENST00000616710 OR8B3Q8NGG8 313 aa11.89□□□□□ -0.51
TNFRSF11A-205ENST00000616710 OR1L1Q8NH94 360 aa11.89□□□□□ -0.51
TNFRSF11A-205ENST00000616710 ABHD3Q8WU67 409 aa11.89□□□□□ -0.51
TNFRSF11A-205ENST00000616710 PSMG3Q9BT73 122 aaPredicted RBP11.89□□□□□ -0.51
TNFRSF11A-205ENST00000616710 NPCDR1Q9BY65 106 aa11.89□□□□□ -0.51
TNFRSF11A-205ENST00000616710 ANAPC10Q9UM13 185 aa11.89□□□□□ -0.51
TNFRSF11A-205ENST00000616710 RNF114Q9Y508 228 aa11.89□□□□□ -0.51
TNFRSF11A-205ENST00000616710 ARFGEF3Q5TH69 2177 aa11.88□□□□□ -0.51
TNFRSF11A-205ENST00000616710 CACNA1HO95180 2353 aa11.88□□□□□ -0.51
TNFRSF11A-205ENST00000616710 LAMA1P25391 3075 aa11.88□□□□□ -0.51
TNFRSF11A-205ENST00000616710 MUC21A0A0G2JKD1 596 aa11.88□□□□□ -0.51
TNFRSF11A-205ENST00000616710 MUC21A0A140T8X8 626 aa11.88□□□□□ -0.51
TNFRSF11A-205ENST00000616710 hDV102S1A0JD36 115 aa11.88□□□□□ -0.51
TNFRSF11A-205ENST00000616710 GAGE12BA1L429 117 aa11.88□□□□□ -0.51
TNFRSF11A-205ENST00000616710 MRPL33O75394 65 aaKnown RBP11.88□□□□□ -0.51
TNFRSF11A-205ENST00000616710 COL8A2P25067 703 aa11.88□□□□□ -0.51
TNFRSF11A-205ENST00000616710 MUC21Q5SSG8 566 aa11.88□□□□□ -0.51
TNFRSF11A-205ENST00000616710 TEX43Q6ZNM6 134 aa11.88□□□□□ -0.51
TNFRSF11A-205ENST00000616710 MRPL13Q9BYD1 178 aaKnown RBP11.88□□□□□ -0.51
TNFRSF11A-205ENST00000616710 SLC45A2Q9UMX9 530 aa11.88□□□□□ -0.51
TNFRSF11A-205ENST00000616710 GPR179Q6PRD1 2367 aa11.88□□□□□ -0.51
TNFRSF11A-205ENST00000616710 FREM1Q5H8C1 2179 aa11.88□□□□□ -0.51
TNFRSF11A-205ENST00000616710 TMEM238C9JI98 176 aa11.88□□□□□ -0.51
TNFRSF11A-205ENST00000616710 S1PR2O95136 353 aa11.88□□□□□ -0.51
TNFRSF11A-205ENST00000616710 SMAGPQ0VAQ4 97 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms